RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 HERC5Q9UII4 1024 aaKnown RBP16.19■□□□□ 0.18
SDF4-203ENST00000403997 FLT1P17948 1338 aa16.19■□□□□ 0.18
SDF4-203ENST00000403997 COL2A1P02458 1487 aaPredicted RBP16.18■□□□□ 0.18
SDF4-203ENST00000403997 USP5P45974 858 aa16.18■□□□□ 0.18
SDF4-203ENST00000403997 TMED8Q6PL24 325 aaPredicted RBP16.18■□□□□ 0.18
SDF4-203ENST00000403997 GADL1Q6ZQY3 521 aa16.18■□□□□ 0.18
SDF4-203ENST00000403997 FASTKD5Q7L8L6 764 aaKnown RBP16.18■□□□□ 0.18
SDF4-203ENST00000403997 CCDC84Q86UT8 332 aaPredicted RBP16.18■□□□□ 0.18
SDF4-203ENST00000403997 FOXP4Q8IVH2 680 aaPredicted RBP16.18■□□□□ 0.18
SDF4-203ENST00000403997 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.18■□□□□ 0.18
SDF4-203ENST00000403997 TRIM34Q9BYJ4 488 aa16.18■□□□□ 0.18
SDF4-203ENST00000403997 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.18■□□□□ 0.18
SDF4-203ENST00000403997 PALD1Q9ULE6 856 aa16.18■□□□□ 0.18
SDF4-203ENST00000403997 MYO5AQ9Y4I1 1855 aaKnown RBP16.18■□□□□ 0.18
SDF4-203ENST00000403997 A0A0G2JLL6 359 aaPredicted RBP16.17■□□□□ 0.18
SDF4-203ENST00000403997 TRIM75PA6NK02 468 aa16.17■□□□□ 0.18
SDF4-203ENST00000403997 GOLIM4O00461 696 aa16.17■□□□□ 0.18
SDF4-203ENST00000403997 CAP2P40123 477 aa16.17■□□□□ 0.18
SDF4-203ENST00000403997 CAP1Q01518 475 aa16.17■□□□□ 0.18
SDF4-203ENST00000403997 KIF22Q14807 665 aa16.17■□□□□ 0.18
SDF4-203ENST00000403997 GPAT2Q6NUI2 795 aa16.17■□□□□ 0.18
SDF4-203ENST00000403997 PRRT2Q7Z6L0 340 aaPredicted RBP16.17■□□□□ 0.18
SDF4-203ENST00000403997 CERS3Q8IU89 383 aa16.17■□□□□ 0.18
SDF4-203ENST00000403997 CRACR2BQ8N4Y2 399 aaPredicted RBP16.17■□□□□ 0.18
SDF4-203ENST00000403997 YTHDC1Q96MU7 727 aaKnown RBP16.17■□□□□ 0.18
SDF4-203ENST00000403997 LRRCC1Q9C099 1032 aa16.17■□□□□ 0.18
SDF4-203ENST00000403997 BOLA2Q9H3K6 86 aa16.17■□□□□ 0.18
SDF4-203ENST00000403997 CPA4Q9UI42 421 aa16.17■□□□□ 0.18
SDF4-203ENST00000403997 PTPN22Q9Y2R2 807 aa16.17■□□□□ 0.18
SDF4-203ENST00000403997 SMARCA5O60264 1052 aaPredicted RBP16.16■□□□□ 0.18
SDF4-203ENST00000403997 HLA-DOAP06340 250 aa16.16■□□□□ 0.18
SDF4-203ENST00000403997 RRP1BQ14684 758 aaKnown RBP16.16■□□□□ 0.18
SDF4-203ENST00000403997 SLC4A8Q2Y0W8 1093 aa16.16■□□□□ 0.18
SDF4-203ENST00000403997 SLC9C2Q5TAH2 1124 aa16.16■□□□□ 0.18
SDF4-203ENST00000403997 C17orf99Q6UX52 265 aa16.16■□□□□ 0.18
SDF4-203ENST00000403997 MAGEB6P1A0A0J9YX57 407 aa16.15■□□□□ 0.18
SDF4-203ENST00000403997 USP17L5A8MUK1 530 aa16.15■□□□□ 0.18
SDF4-203ENST00000403997 ECM2O94769 699 aaPredicted RBP16.15■□□□□ 0.18
SDF4-203ENST00000403997 PDE6AP16499 860 aa16.15■□□□□ 0.18
SDF4-203ENST00000403997 ATP5JP18859 108 aa16.15■□□□□ 0.18
SDF4-203ENST00000403997 LACTBP83111 547 aaPredicted RBP16.15■□□□□ 0.18
SDF4-203ENST00000403997 SPP2Q13103 211 aa16.15■□□□□ 0.18
SDF4-203ENST00000403997 EDC3Q96F86 508 aaKnown RBP16.15■□□□□ 0.18
SDF4-203ENST00000403997 PARK7Q99497 189 aaKnown RBP16.15■□□□□ 0.18
SDF4-203ENST00000403997 MAST2Q6P0Q8 1798 aa16.15■□□□□ 0.18
SDF4-203ENST00000403997 CYP2C8P10632 490 aa16.14■□□□□ 0.17
SDF4-203ENST00000403997 ZNF280CQ8ND82 737 aa16.14■□□□□ 0.17
SDF4-203ENST00000403997 TBC1D2Q9BYX2 928 aa16.14■□□□□ 0.17
SDF4-203ENST00000403997 ARHGAP39Q9C0H5 1083 aa16.14■□□□□ 0.17
SDF4-203ENST00000403997 PAG1Q9NWQ8 432 aa16.14■□□□□ 0.17
SDF4-203ENST00000403997 PDE4DIPQ5VU43 2346 aa16.13■□□□□ 0.17
SDF4-203ENST00000403997 RRP1P56182 461 aaKnown RBP16.13■□□□□ 0.17
SDF4-203ENST00000403997 METTL16Q86W50 562 aaKnown RBP16.13■□□□□ 0.17
SDF4-203ENST00000403997 HAUS7Q99871 368 aa16.13■□□□□ 0.17
SDF4-203ENST00000403997 RIOK1Q9BRS2 568 aaKnown RBP16.13■□□□□ 0.17
SDF4-203ENST00000403997 DCTPP1Q9H773 170 aa16.13■□□□□ 0.17
SDF4-203ENST00000403997 DNAJC18Q9H819 358 aa16.13■□□□□ 0.17
SDF4-203ENST00000403997 AS3MTQ9HBK9 375 aa16.13■□□□□ 0.17
SDF4-203ENST00000403997 SLC45A1Q9Y2W3 748 aa16.13■□□□□ 0.17
SDF4-203ENST00000403997 ZNF532Q9HCE3 1301 aa16.13■□□□□ 0.17
SDF4-203ENST00000403997 DOCK1Q14185 1865 aa16.12■□□□□ 0.17
SDF4-203ENST00000403997 ASNSP08243 561 aa16.12■□□□□ 0.17
SDF4-203ENST00000403997 PSMC4P43686 418 aa16.12■□□□□ 0.17
SDF4-203ENST00000403997 TTC6Q86TZ1 520 aa16.12■□□□□ 0.17
SDF4-203ENST00000403997 CRNKL1Q9BZJ0 848 aaKnown RBP16.12■□□□□ 0.17
SDF4-203ENST00000403997 AGTPBP1Q9UPW5 1226 aa16.12■□□□□ 0.17
SDF4-203ENST00000403997 ADGRA2Q96PE1 1338 aa16.12■□□□□ 0.17
SDF4-203ENST00000403997 TCRBV5S4A2TA0A5A2 114 aa16.11■□□□□ 0.17
SDF4-203ENST00000403997 GDF11O95390 407 aa16.11■□□□□ 0.17
SDF4-203ENST00000403997 FMNL1O95466 1100 aaPredicted RBP16.11■□□□□ 0.17
SDF4-203ENST00000403997 GNRH1P01148 92 aa16.11■□□□□ 0.17
SDF4-203ENST00000403997 HMGCS2P54868 508 aa16.11■□□□□ 0.17
SDF4-203ENST00000403997 JAG1P78504 1218 aa16.11■□□□□ 0.17
SDF4-203ENST00000403997 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.11■□□□□ 0.176e-7■□□□□ 8.8
SDF4-203ENST00000403997 PCDHB15Q9Y5E8 787 aa16.11■□□□□ 0.17
SDF4-203ENST00000403997 PTCH2Q9Y6C5 1203 aa16.11■□□□□ 0.17
SDF4-203ENST00000403997 POLR3DP05423 398 aaPredicted RBP16.1■□□□□ 0.17
SDF4-203ENST00000403997 HOXD10P28358 340 aa16.1■□□□□ 0.17
SDF4-203ENST00000403997 SHROOM1Q2M3G4 852 aaPredicted RBP16.1■□□□□ 0.17
SDF4-203ENST00000403997 SLFNL1Q499Z3 407 aa16.1■□□□□ 0.17
SDF4-203ENST00000403997 TREML2Q5T2D2 321 aa16.1■□□□□ 0.17
SDF4-203ENST00000403997 NBPF11Q86T75 865 aa16.1■□□□□ 0.17
SDF4-203ENST00000403997 PROCA1Q8NCQ7 364 aaPredicted RBP16.1■□□□□ 0.17
SDF4-203ENST00000403997 SMCR8Q8TEV9 937 aaPredicted RBP16.1■□□□□ 0.17
SDF4-203ENST00000403997 WDR18Q9BV38 432 aa16.1■□□□□ 0.17
SDF4-203ENST00000403997 ECHDC1Q9NTX5 307 aa16.1■□□□□ 0.17
SDF4-203ENST00000403997 GINM1Q9NU53 330 aa16.1■□□□□ 0.17
SDF4-203ENST00000403997 SERPINB13Q9UIV8 391 aa16.1■□□□□ 0.17
SDF4-203ENST00000403997 BCRP11274 1271 aa16.09■□□□□ 0.17
SDF4-203ENST00000403997 CTGFP29279 349 aa16.09■□□□□ 0.17
SDF4-203ENST00000403997 ADD2P35612 726 aa16.09■□□□□ 0.17
SDF4-203ENST00000403997 PRMT2P55345 433 aa16.09■□□□□ 0.17
SDF4-203ENST00000403997 SLC9C1Q4G0N8 1177 aa16.09■□□□□ 0.17
SDF4-203ENST00000403997 ARMC5Q96C12 935 aa16.09■□□□□ 0.17
SDF4-203ENST00000403997 GPATCH3Q96I76 525 aa16.09■□□□□ 0.17
SDF4-203ENST00000403997 TRIM47Q96LD4 638 aa16.09■□□□□ 0.17
SDF4-203ENST00000403997 MCM9Q9NXL9 1143 aa16.09■□□□□ 0.17
SDF4-203ENST00000403997 TMOD4Q9NZQ9 345 aa16.09■□□□□ 0.17
SDF4-203ENST00000403997 PNMA3Q9UL41 463 aa16.09■□□□□ 0.17
SDF4-203ENST00000403997 ZBTB21Q9ULJ3 1066 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 137 ms