RNA–Protein interactions for RNA: ENST00000394884.7

CDC23-201, Transcript of cell division cycle 23, humanhuman

TSL 1 (best) BASIC

Gene CDC23, Length 1,079 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC23-201ENST00000394884 LAMB1P07942 1786 aa13.17□□□□□ -0.3
CDC23-201ENST00000394884 USP46P62068 366 aa13.17□□□□□ -0.3
CDC23-201ENST00000394884 SNAPC2Q13487 334 aa13.17□□□□□ -0.3
CDC23-201ENST00000394884 DCTN1Q14203 1278 aa13.17□□□□□ -0.3
CDC23-201ENST00000394884 PDE3AQ14432 1141 aa13.17□□□□□ -0.3
CDC23-201ENST00000394884 CCDC85BQ15834 202 aaPredicted RBP13.17□□□□□ -0.3
CDC23-201ENST00000394884 PLA2G2CQ5R387 149 aa13.17□□□□□ -0.3
CDC23-201ENST00000394884 STRIP1Q5VSL9 837 aa13.17□□□□□ -0.3
CDC23-201ENST00000394884 FAM160A2Q8N612 972 aaPredicted RBP13.17□□□□□ -0.3
CDC23-201ENST00000394884 ZBTB38Q8NAP3 1195 aaPredicted RBP13.17□□□□□ -0.3
CDC23-201ENST00000394884 CSADQ9Y600 493 aa13.17□□□□□ -0.3
CDC23-201ENST00000394884 PDHXO00330 501 aa13.16□□□□□ -0.3
CDC23-201ENST00000394884 PHACTR3Q96KR7 559 aa13.16□□□□□ -0.3
CDC23-201ENST00000394884 C11orf16Q9NQ32 467 aa13.16□□□□□ -0.3
CDC23-201ENST00000394884 SEC31BQ9NQW1 1179 aa13.16□□□□□ -0.3
CDC23-201ENST00000394884 AOX1Q06278 1338 aa13.15□□□□□ -0.3
CDC23-201ENST00000394884 SPDYE5A6NIY4 337 aa13.15□□□□□ -0.3
CDC23-201ENST00000394884 U2SURPO15042 1029 aaKnown RBP13.15□□□□□ -0.3
CDC23-201ENST00000394884 MMP14P50281 582 aa13.15□□□□□ -0.3
CDC23-201ENST00000394884 MSS51Q4VC12 460 aa13.15□□□□□ -0.3
CDC23-201ENST00000394884 RTL5Q5HYW3 569 aaPredicted RBP13.15□□□□□ -0.3
CDC23-201ENST00000394884 TTLL5Q6EMB2 1281 aa13.15□□□□□ -0.3
CDC23-201ENST00000394884 RNF19BQ6ZMZ0 732 aa13.15□□□□□ -0.3
CDC23-201ENST00000394884 TRIM67Q6ZTA4 783 aa13.15□□□□□ -0.3
CDC23-201ENST00000394884 MTMR14Q8NCE2 650 aa13.15□□□□□ -0.3
CDC23-201ENST00000394884 FAM89AQ96GI7 184 aa13.15□□□□□ -0.3
CDC23-201ENST00000394884 PANK3Q9H999 370 aa13.15□□□□□ -0.3
CDC23-201ENST00000394884 FCF1Q9Y324 198 aaKnown RBP13.15□□□□□ -0.3
CDC23-201ENST00000394884 MYO1BO43795 1136 aa13.14□□□□□ -0.31
CDC23-201ENST00000394884 GPR37L1O60883 481 aa13.14□□□□□ -0.31
CDC23-201ENST00000394884 ATP2B4P23634 1241 aa13.14□□□□□ -0.31
CDC23-201ENST00000394884 PRR20EP86478 221 aa13.14□□□□□ -0.31
CDC23-201ENST00000394884 PRR20CP86479 221 aa13.14□□□□□ -0.31
CDC23-201ENST00000394884 PRR20DP86480 221 aa13.14□□□□□ -0.31
CDC23-201ENST00000394884 PRR20BP86481 221 aa13.14□□□□□ -0.31
CDC23-201ENST00000394884 PRR20AP86496 221 aa13.14□□□□□ -0.31
CDC23-201ENST00000394884 NHLH1Q02575 133 aa13.14□□□□□ -0.31
CDC23-201ENST00000394884 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.14□□□□□ -0.31
CDC23-201ENST00000394884 RTF1Q92541 710 aaKnown RBP13.14□□□□□ -0.31
CDC23-201ENST00000394884 FAM217BQ9NTX9 383 aaPredicted RBP13.14□□□□□ -0.31
CDC23-201ENST00000394884 LAMB2P55268 1798 aa13.14□□□□□ -0.31
CDC23-201ENST00000394884 ANKRD36CQ5JPF3 1778 aa13.14□□□□□ -0.31
CDC23-201ENST00000394884 ANXA1P04083 346 aa13.13□□□□□ -0.31
CDC23-201ENST00000394884 BCRP11274 1271 aa13.13□□□□□ -0.31
CDC23-201ENST00000394884 BMP1P13497 986 aa13.13□□□□□ -0.31
CDC23-201ENST00000394884 IRF5Q13568 498 aa13.13□□□□□ -0.31
CDC23-201ENST00000394884 HSP90AB3PQ58FF7 597 aa13.13□□□□□ -0.31
CDC23-201ENST00000394884 ANKRD23Q86SG2 305 aa13.13□□□□□ -0.31
CDC23-201ENST00000394884 PRMT6Q96LA8 375 aaPredicted RBP13.13□□□□□ -0.31
CDC23-201ENST00000394884 OGDHLQ9ULD0 1010 aa13.13□□□□□ -0.31
CDC23-201ENST00000394884 XDHP47989 1333 aa13.13□□□□□ -0.31
CDC23-201ENST00000394884 SMIM22K7EJ46 135 aa13.12□□□□□ -0.31
CDC23-201ENST00000394884 LCE2BO14633 110 aa13.12□□□□□ -0.31
CDC23-201ENST00000394884 TNPO2O14787 897 aaKnown RBP13.12□□□□□ -0.31
CDC23-201ENST00000394884 ZMYND10O75800 440 aa13.12□□□□□ -0.31
CDC23-201ENST00000394884 RPIAP49247 311 aa13.12□□□□□ -0.31
CDC23-201ENST00000394884 AIMP1Q12904 312 aaKnown RBP13.12□□□□□ -0.31
CDC23-201ENST00000394884 TRIM32Q13049 653 aa13.12□□□□□ -0.31
CDC23-201ENST00000394884 TAF7Q15545 349 aaPredicted RBP13.12□□□□□ -0.31
CDC23-201ENST00000394884 CFAP100Q494V2 611 aa13.12□□□□□ -0.31
CDC23-201ENST00000394884 ERO1BQ86YB8 467 aa13.12□□□□□ -0.31
CDC23-201ENST00000394884 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.12□□□□□ -0.31
CDC23-201ENST00000394884 HMX1Q9NP08 348 aaPredicted RBP13.12□□□□□ -0.31
CDC23-201ENST00000394884 PRDM9Q9NQV7 894 aa13.12□□□□□ -0.31
CDC23-201ENST00000394884 SNCAIPQ9Y6H5 919 aa13.12□□□□□ -0.31
CDC23-201ENST00000394884 F8W031 263 aaPredicted RBP13.11□□□□□ -0.31
CDC23-201ENST00000394884 CYP2C8P10632 490 aa13.11□□□□□ -0.31
CDC23-201ENST00000394884 COL6A1P12109 1028 aa13.11□□□□□ -0.31
CDC23-201ENST00000394884 GTF2IP78347 998 aa13.11□□□□□ -0.31
CDC23-201ENST00000394884 MUC6Q6W4X9 2439 aa13.1□□□□□ -0.31
CDC23-201ENST00000394884 U2AF1L5P0DN76 240 aaPredicted RBP13.1□□□□□ -0.31
CDC23-201ENST00000394884 U2AF1Q01081 240 aaKnown RBP eCLIP13.1□□□□□ -0.31
CDC23-201ENST00000394884 FOXK2Q01167 660 aa13.1□□□□□ -0.31
CDC23-201ENST00000394884 PROSER3Q2NL68 480 aa13.1□□□□□ -0.31
CDC23-201ENST00000394884 LRP10Q7Z4F1 713 aa13.1□□□□□ -0.31
CDC23-201ENST00000394884 ZKSCAN4Q969J2 545 aaPredicted RBP13.1□□□□□ -0.31
CDC23-201ENST00000394884 GAS2L1Q99501 681 aaPredicted RBP13.1□□□□□ -0.31
CDC23-201ENST00000394884 ZNF576Q9H609 170 aa13.1□□□□□ -0.31
CDC23-201ENST00000394884 PRKAG2Q9UGJ0 569 aa13.1□□□□□ -0.31
CDC23-201ENST00000394884 HOXA2O43364 376 aa13.09□□□□□ -0.31
CDC23-201ENST00000394884 EIF4A1P60842 406 aaKnown RBP13.09□□□□□ -0.31
CDC23-201ENST00000394884 EIF4G2P78344 907 aaKnown RBP eCLIP13.09□□□□□ -0.31
CDC23-201ENST00000394884 TFF2Q03403 129 aa13.09□□□□□ -0.31
CDC23-201ENST00000394884 PPIL2Q13356 520 aa13.09□□□□□ -0.31
CDC23-201ENST00000394884 AKNAD1Q5T1N1 836 aa13.09□□□□□ -0.31
CDC23-201ENST00000394884 COPS6Q7L5N1 327 aa13.09□□□□□ -0.31
CDC23-201ENST00000394884 TXNRD3Q86VQ6 643 aa13.09□□□□□ -0.31
CDC23-201ENST00000394884 TEPSINQ96N21 525 aa13.09□□□□□ -0.31
CDC23-201ENST00000394884 COA1Q9GZY4 146 aa13.09□□□□□ -0.31
CDC23-201ENST00000394884 CDH23Q9H251 3354 aa13.09□□□□□ -0.31
CDC23-201ENST00000394884 IRS4O14654 1257 aaPredicted RBP13.08□□□□□ -0.32
CDC23-201ENST00000394884 EIF2S2P20042 333 aaKnown RBP13.08□□□□□ -0.32
CDC23-201ENST00000394884 KCNQ1P51787 676 aa13.08□□□□□ -0.32
CDC23-201ENST00000394884 RBM5P52756 815 aaKnown RBP eCLIP13.08□□□□□ -0.32
CDC23-201ENST00000394884 CCDC85AQ96PX6 553 aaPredicted RBP13.08□□□□□ -0.32
CDC23-201ENST00000394884 PARK7Q99497 189 aaKnown RBP13.08□□□□□ -0.32
CDC23-201ENST00000394884 USB1Q9BQ65 265 aaKnown RBP13.08□□□□□ -0.32
CDC23-201ENST00000394884 BDP1A6H8Y1 2624 aa13.08□□□□□ -0.32
CDC23-201ENST00000394884 MED23Q9ULK4 1368 aa13.07□□□□□ -0.32
CDC23-201ENST00000394884 GDF9O60383 454 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms