RNA–Protein interactions for RNA: ENST00000389645.7

CAPRIN1-202, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPRIN1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-202ENST00000389645 NKX2-3Q8TAU0 364 aa13.95□□□□□ -0.18
CAPRIN1-202ENST00000389645 CLIC6Q96NY7 704 aa13.95□□□□□ -0.18
CAPRIN1-202ENST00000389645 hCG_1642624A0A1W2PR95 340 aa13.95□□□□□ -0.18
CAPRIN1-202ENST00000389645 KIF28PB7ZC32 967 aa13.95□□□□□ -0.18
CAPRIN1-202ENST00000389645 ZNF202O95125 648 aa13.95□□□□□ -0.18
CAPRIN1-202ENST00000389645 SERPINC1P01008 464 aa13.95□□□□□ -0.18
CAPRIN1-202ENST00000389645 SYKP43405 635 aa13.95□□□□□ -0.18
CAPRIN1-202ENST00000389645 ANTXR2P58335 489 aa13.95□□□□□ -0.18
CAPRIN1-202ENST00000389645 ZNF772Q68DY9 489 aaPredicted RBP13.95□□□□□ -0.18
CAPRIN1-202ENST00000389645 CYB5R4Q7L1T6 521 aa13.95□□□□□ -0.18
CAPRIN1-202ENST00000389645 HOMER1Q86YM7 354 aa13.95□□□□□ -0.18
CAPRIN1-202ENST00000389645 IFNKQ9P0W0 207 aa13.95□□□□□ -0.18
CAPRIN1-202ENST00000389645 SLC4A4Q9Y6R1 1079 aa13.95□□□□□ -0.18
CAPRIN1-202ENST00000389645 NRDCO43847 1150 aa13.94□□□□□ -0.18
CAPRIN1-202ENST00000389645 AKAP17AQ02040 695 aaKnown RBP13.94□□□□□ -0.18
CAPRIN1-202ENST00000389645 SLC27A3Q5K4L6 730 aa13.94□□□□□ -0.18
CAPRIN1-202ENST00000389645 KRT40Q6A162 431 aa13.94□□□□□ -0.18
CAPRIN1-202ENST00000389645 FAM177A1Q8N128 213 aaPredicted RBP13.94□□□□□ -0.18
CAPRIN1-202ENST00000389645 LINC00301Q8NCQ3 95 aa13.94□□□□□ -0.18
CAPRIN1-202ENST00000389645 KCNJ14Q9UNX9 436 aa13.94□□□□□ -0.18
CAPRIN1-202ENST00000389645 SCN7AQ01118 1682 aa13.94□□□□□ -0.18
CAPRIN1-202ENST00000389645 LRP5O75197 1615 aa13.94□□□□□ -0.18
CAPRIN1-202ENST00000389645 CDKL5O76039 1030 aa13.94□□□□□ -0.18
CAPRIN1-202ENST00000389645 MFSD6Q6ZSS7 791 aa13.94□□□□□ -0.18
CAPRIN1-202ENST00000389645 MB21D2Q8IYB1 491 aaPredicted RBP13.94□□□□□ -0.18
CAPRIN1-202ENST00000389645 ANKIB1Q9P2G1 1089 aa13.94□□□□□ -0.18
CAPRIN1-202ENST00000389645 DDR1Q08345 913 aa13.94□□□□□ -0.18
CAPRIN1-202ENST00000389645 UBE4AQ14139 1066 aa13.94□□□□□ -0.18
CAPRIN1-202ENST00000389645 UBE3CQ15386 1083 aa13.94□□□□□ -0.18
CAPRIN1-202ENST00000389645 CAVIN4Q5BKX8 364 aa13.94□□□□□ -0.18
CAPRIN1-202ENST00000389645 ADALQ6DHV7 355 aa13.94□□□□□ -0.18
CAPRIN1-202ENST00000389645 ADGRA1Q86SQ6 560 aa13.93□□□□□ -0.18
CAPRIN1-202ENST00000389645 ILDR1Q86SU0 546 aaPredicted RBP13.93□□□□□ -0.18
CAPRIN1-202ENST00000389645 STRBPQ96SI9 672 aaKnown RBP13.93□□□□□ -0.18
CAPRIN1-202ENST00000389645 NACAP1Q9BZK3 213 aa13.93□□□□□ -0.18
CAPRIN1-202ENST00000389645 PRDM1O75626 825 aa13.93□□□□□ -0.18
CAPRIN1-202ENST00000389645 RXRBP28702 533 aa13.93□□□□□ -0.18
CAPRIN1-202ENST00000389645 SNW1Q13573 536 aaKnown RBP13.93□□□□□ -0.18
CAPRIN1-202ENST00000389645 SART3Q15020 963 aaKnown RBP13.93□□□□□ -0.18
CAPRIN1-202ENST00000389645 CFAP100Q494V2 611 aa13.93□□□□□ -0.18
CAPRIN1-202ENST00000389645 PDCL2Q8N4E4 241 aa13.93□□□□□ -0.18
CAPRIN1-202ENST00000389645 PFKFB1P16118 471 aa13.92□□□□□ -0.18
CAPRIN1-202ENST00000389645 PTPN14Q15678 1187 aa13.92□□□□□ -0.18
CAPRIN1-202ENST00000389645 TRIM22Q8IYM9 498 aa13.92□□□□□ -0.18
CAPRIN1-202ENST00000389645 UBAC1Q9BSL1 405 aa13.92□□□□□ -0.18
CAPRIN1-202ENST00000389645 ADRA2BP18089 450 aa13.92□□□□□ -0.18
CAPRIN1-202ENST00000389645 CDC27P30260 824 aa13.92□□□□□ -0.18
CAPRIN1-202ENST00000389645 SSRP1Q08945 709 aaKnown RBP13.92□□□□□ -0.18
CAPRIN1-202ENST00000389645 NAA30Q147X3 362 aaPredicted RBP13.92□□□□□ -0.18
CAPRIN1-202ENST00000389645 CNNM3Q8NE01 707 aa13.92□□□□□ -0.18
CAPRIN1-202ENST00000389645 KIAA1468Q9P260 1216 aa13.92□□□□□ -0.18
CAPRIN1-202ENST00000389645 C4AP0C0L4 1744 aa13.92□□□□□ -0.18
CAPRIN1-202ENST00000389645 RANBP6O60518 1105 aaKnown RBP13.92□□□□□ -0.18
CAPRIN1-202ENST00000389645 CYP7A1P22680 504 aa13.92□□□□□ -0.18
CAPRIN1-202ENST00000389645 UTP14CQ5TAP6 766 aaKnown RBP13.92□□□□□ -0.18
CAPRIN1-202ENST00000389645 MSL1Q68DK7 614 aa13.92□□□□□ -0.18
CAPRIN1-202ENST00000389645 APOA5Q6Q788 366 aa13.92□□□□□ -0.18
CAPRIN1-202ENST00000389645 LCORLQ8N3X6 602 aa13.92□□□□□ -0.18
CAPRIN1-202ENST00000389645 JMYQ8N9B5 988 aa13.92□□□□□ -0.18
CAPRIN1-202ENST00000389645 SDR42E1Q8WUS8 393 aa13.92□□□□□ -0.18
CAPRIN1-202ENST00000389645 HPS5Q9UPZ3 1129 aa13.92□□□□□ -0.18
CAPRIN1-202ENST00000389645 RGL2O15211 777 aa13.91□□□□□ -0.18
CAPRIN1-202ENST00000389645 KIF23Q02241 960 aaPredicted RBP13.91□□□□□ -0.18
CAPRIN1-202ENST00000389645 COL23A1Q86Y22 540 aaPredicted RBP13.91□□□□□ -0.18
CAPRIN1-202ENST00000389645 NBPF3Q9H094 633 aa13.91□□□□□ -0.18
CAPRIN1-202ENST00000389645 RTEL1Q9NZ71 1219 aa13.91□□□□□ -0.18
CAPRIN1-202ENST00000389645 CAVIN2O95810 425 aa13.91□□□□□ -0.18
CAPRIN1-202ENST00000389645 PNOCQ13519 176 aa13.91□□□□□ -0.18
CAPRIN1-202ENST00000389645 IQCB1Q15051 598 aa13.91□□□□□ -0.18
CAPRIN1-202ENST00000389645 OLFM4Q6UX06 510 aa13.91□□□□□ -0.18
CAPRIN1-202ENST00000389645 IFNL3Q8IZI9 196 aa13.91□□□□□ -0.18
CAPRIN1-202ENST00000389645 RPGRQ92834 1020 aaKnown RBP13.91□□□□□ -0.18
CAPRIN1-202ENST00000389645 XPO4Q9C0E2 1151 aaKnown RBP13.91□□□□□ -0.18
CAPRIN1-202ENST00000389645 GNL3LQ9NVN8 582 aaKnown RBP13.91□□□□□ -0.18
CAPRIN1-202ENST00000389645 ZNF804BA4D1E1 1349 aa13.91□□□□□ -0.18
CAPRIN1-202ENST00000389645 NEDD4P46934 1319 aa13.91□□□□□ -0.18
CAPRIN1-202ENST00000389645 USP27XA6NNY8 438 aa13.91□□□□□ -0.18
CAPRIN1-202ENST00000389645 SMIM22K7EJ46 135 aa13.91□□□□□ -0.18
CAPRIN1-202ENST00000389645 SFPQP23246 707 aaKnown RBP eCLIP13.91□□□□□ -0.185e-6■□□□□ 11.2
CAPRIN1-202ENST00000389645 CEP135Q66GS9 1140 aa13.91□□□□□ -0.18
CAPRIN1-202ENST00000389645 BRAPQ7Z569 592 aa13.91□□□□□ -0.18
CAPRIN1-202ENST00000389645 PLA2G4DQ86XP0 818 aa13.91□□□□□ -0.18
CAPRIN1-202ENST00000389645 TMX1Q9H3N1 280 aa13.91□□□□□ -0.18
CAPRIN1-202ENST00000389645 ZSWIM5Q9P217 1185 aa13.91□□□□□ -0.18
CAPRIN1-202ENST00000389645 LAMB2P55268 1798 aa13.9□□□□□ -0.18
CAPRIN1-202ENST00000389645 BTBD18B2RXH4 712 aa13.9□□□□□ -0.18
CAPRIN1-202ENST00000389645 HIBADHP31937 336 aaKnown RBP13.9□□□□□ -0.18
CAPRIN1-202ENST00000389645 WTAPQ15007 396 aa13.9□□□□□ -0.18
CAPRIN1-202ENST00000389645 LRRC8AQ8IWT6 810 aa13.9□□□□□ -0.18
CAPRIN1-202ENST00000389645 SECISBP2LQ93073 1101 aaKnown RBP13.9□□□□□ -0.18
CAPRIN1-202ENST00000389645 RGS17Q9UGC6 210 aaPredicted RBP13.9□□□□□ -0.18
CAPRIN1-202ENST00000389645 COL1A1P02452 1464 aaPredicted RBP13.9□□□□□ -0.18
CAPRIN1-202ENST00000389645 POTEAQ6S8J7 498 aa13.9□□□□□ -0.18
CAPRIN1-202ENST00000389645 TICAM2Q86XR7 235 aa13.9□□□□□ -0.18
CAPRIN1-202ENST00000389645 FMR1NBQ8N0W7 255 aaPredicted RBP13.9□□□□□ -0.18
CAPRIN1-202ENST00000389645 EPB41L4AQ9HCS5 686 aaPredicted RBP13.9□□□□□ -0.18
CAPRIN1-202ENST00000389645 SPTLC3Q9NUV7 552 aa13.9□□□□□ -0.18
CAPRIN1-202ENST00000389645 KLHL10Q6JEL2 608 aa13.89□□□□□ -0.19
CAPRIN1-202ENST00000389645 FBXO33Q7Z6M2 555 aa13.89□□□□□ -0.19
CAPRIN1-202ENST00000389645 TNRC6CQ9HCJ0 1690 aaKnown RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms