RNA–Protein interactions for RNA: ENST00000389194.6

LTN1-202, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-202ENST00000389194 TFAP4Q01664 338 aa5.61□□□□□ -1.51
LTN1-202ENST00000389194 PPP4R3AQ6IN85 833 aa5.61□□□□□ -1.51
LTN1-202ENST00000389194 PGBD1Q96JS3 809 aa5.61□□□□□ -1.51
LTN1-202ENST00000389194 PCDHA7Q9UN72 937 aa5.61□□□□□ -1.51
LTN1-202ENST00000389194 ENC1O14682 589 aa5.61□□□□□ -1.51
LTN1-202ENST00000389194 PRKAB2O43741 272 aa5.61□□□□□ -1.51
LTN1-202ENST00000389194 CETN2P41208 172 aa5.61□□□□□ -1.51
LTN1-202ENST00000389194 SCNN1DP51172 638 aa5.61□□□□□ -1.51
LTN1-202ENST00000389194 NAA30Q147X3 362 aaPredicted RBP5.61□□□□□ -1.51
LTN1-202ENST00000389194 PUM3Q15397 648 aaKnown RBP5.61□□□□□ -1.51
LTN1-202ENST00000389194 UAP1Q16222 522 aaPredicted RBP5.61□□□□□ -1.51
LTN1-202ENST00000389194 CCDC114Q96M63 670 aa5.61□□□□□ -1.51
LTN1-202ENST00000389194 EIF2AK4Q9P2K8 1649 aaKnown RBP5.61□□□□□ -1.51
LTN1-202ENST00000389194 KRT5P13647 590 aa5.61□□□□□ -1.51
LTN1-202ENST00000389194 HIBADHP31937 336 aaKnown RBP5.61□□□□□ -1.51
LTN1-202ENST00000389194 NCAPH2Q6IBW4 605 aa5.61□□□□□ -1.51
LTN1-202ENST00000389194 SLF2Q8IX21 1173 aa5.61□□□□□ -1.51
LTN1-202ENST00000389194 BUB1O43683 1085 aa5.61□□□□□ -1.51
LTN1-202ENST00000389194 CYP21A2P08686 494 aa5.61□□□□□ -1.51
LTN1-202ENST00000389194 CASP1P29466 404 aa5.61□□□□□ -1.51
LTN1-202ENST00000389194 GUCY2FP51841 1108 aa5.61□□□□□ -1.51
LTN1-202ENST00000389194 SMIM5Q71RC9 77 aa5.61□□□□□ -1.51
LTN1-202ENST00000389194 SSH3Q8TE77 659 aa5.61□□□□□ -1.51
LTN1-202ENST00000389194 FERMT2Q96AC1 680 aa5.61□□□□□ -1.51
LTN1-202ENST00000389194 GPR101Q96P66 508 aaPredicted RBP5.61□□□□□ -1.51
LTN1-202ENST00000389194 LSG1Q9H089 658 aaKnown RBP5.61□□□□□ -1.51
LTN1-202ENST00000389194 SH3TC1Q8TE82 1336 aa5.61□□□□□ -1.51
LTN1-202ENST00000389194 ADGRL2O95490 1459 aa5.61□□□□□ -1.51
LTN1-202ENST00000389194 SMC1AQ14683 1233 aaKnown RBP5.61□□□□□ -1.51
LTN1-202ENST00000389194 DPCR1Q3MIW9 517 aa5.61□□□□□ -1.51
LTN1-202ENST00000389194 MYSM1Q5VVJ2 828 aa5.61□□□□□ -1.51
LTN1-202ENST00000389194 LRRC47Q8N1G4 583 aaKnown RBP5.61□□□□□ -1.51
LTN1-202ENST00000389194 NELFBQ8WX92 580 aa5.61□□□□□ -1.51
LTN1-202ENST00000389194 TBC1D5Q92609 795 aa5.61□□□□□ -1.51
LTN1-202ENST00000389194 SEC31BQ9NQW1 1179 aa5.61□□□□□ -1.51
LTN1-202ENST00000389194 SBNO1A3KN83 1393 aa5.6□□□□□ -1.51
LTN1-202ENST00000389194 M0R2C6 588 aa5.6□□□□□ -1.51
LTN1-202ENST00000389194 TECP42680 631 aa5.6□□□□□ -1.51
LTN1-202ENST00000389194 ZNF804AQ7Z570 1209 aa5.6□□□□□ -1.51
LTN1-202ENST00000389194 GTPBP4Q9BZE4 634 aaKnown RBP5.6□□□□□ -1.51
LTN1-202ENST00000389194 FSD2A1L4K1 749 aa5.6□□□□□ -1.51
LTN1-202ENST00000389194 GCOM1H8Y6P7 765 aaPredicted RBP5.6□□□□□ -1.51
LTN1-202ENST00000389194 MYZAPP0CAP1 466 aa5.6□□□□□ -1.51
LTN1-202ENST00000389194 EZRP15311 586 aaKnown RBP5.6□□□□□ -1.51
LTN1-202ENST00000389194 CALRP27797 417 aaKnown RBP5.6□□□□□ -1.51
LTN1-202ENST00000389194 CACNB1Q02641 598 aaPredicted RBP5.6□□□□□ -1.51
LTN1-202ENST00000389194 POLD4Q9HCU8 107 aa5.6□□□□□ -1.51
LTN1-202ENST00000389194 CCDC169A6NNP5 214 aa5.6□□□□□ -1.51
LTN1-202ENST00000389194 BACH1O14867 736 aa5.6□□□□□ -1.51
LTN1-202ENST00000389194 DEXIO95424 95 aa5.6□□□□□ -1.51
LTN1-202ENST00000389194 MCM3P25205 808 aa5.6□□□□□ -1.51
LTN1-202ENST00000389194 NLRP12P59046 1061 aa5.6□□□□□ -1.51
LTN1-202ENST00000389194 NR5A1Q13285 461 aa5.6□□□□□ -1.51
LTN1-202ENST00000389194 ARHGAP44Q17R89 818 aa5.6□□□□□ -1.51
LTN1-202ENST00000389194 INF2Q27J81 1249 aa5.6□□□□□ -1.51
LTN1-202ENST00000389194 ZNF354CQ86Y25 554 aa5.6□□□□□ -1.51
LTN1-202ENST00000389194 GJA3Q9Y6H8 435 aa5.6□□□□□ -1.51
LTN1-202ENST00000389194 ZFYVE9O95405 1425 aa5.6□□□□□ -1.51
LTN1-202ENST00000389194 ANKRD65E5RJM6 399 aa5.6□□□□□ -1.51
LTN1-202ENST00000389194 MYCLP12524 364 aaPredicted RBP5.6□□□□□ -1.51
LTN1-202ENST00000389194 OAS2P29728 719 aaKnown RBP5.6□□□□□ -1.51
LTN1-202ENST00000389194 ZRSR2Q15696 482 aaKnown RBP5.6□□□□□ -1.51
LTN1-202ENST00000389194 HERC4Q5GLZ8 1057 aaPredicted RBP5.6□□□□□ -1.51
LTN1-202ENST00000389194 SV2BQ7L1I2 683 aa5.6□□□□□ -1.51
LTN1-202ENST00000389194 APBB1IPQ7Z5R6 666 aaPredicted RBP5.6□□□□□ -1.51
LTN1-202ENST00000389194 KIAA1468Q9P260 1216 aa5.6□□□□□ -1.51
LTN1-202ENST00000389194 METP08581 1390 aa5.6□□□□□ -1.51
LTN1-202ENST00000389194 EDC4Q6P2E9 1401 aaKnown RBP5.6□□□□□ -1.51
LTN1-202ENST00000389194 AK9Q5TCS8 1911 aa5.6□□□□□ -1.51
LTN1-202ENST00000389194 ABCB4P21439 1286 aa5.6□□□□□ -1.51
LTN1-202ENST00000389194 DOK7Q18PE1 504 aa5.6□□□□□ -1.51
LTN1-202ENST00000389194 NAA35Q5VZE5 725 aa5.6□□□□□ -1.51
LTN1-202ENST00000389194 CPLX4Q7Z7G2 160 aa5.6□□□□□ -1.51
LTN1-202ENST00000389194 TRMT2AQ8IZ69 625 aaKnown RBP5.6□□□□□ -1.51
LTN1-202ENST00000389194 OGFOD1Q8N543 542 aa5.6□□□□□ -1.51
LTN1-202ENST00000389194 OGFRQ9NZT2 677 aa5.6□□□□□ -1.51
LTN1-202ENST00000389194 ARHGEF12Q9NZN5 1544 aa5.6□□□□□ -1.51
LTN1-202ENST00000389194 CALML3P27482 149 aa5.6□□□□□ -1.51
LTN1-202ENST00000389194 ERCC5P28715 1186 aaPredicted RBP5.6□□□□□ -1.51
LTN1-202ENST00000389194 VPS41P49754 854 aa5.6□□□□□ -1.51
LTN1-202ENST00000389194 ATP1A2P50993 1020 aa5.6□□□□□ -1.51
LTN1-202ENST00000389194 DYNLL1P63167 89 aaKnown RBP5.6□□□□□ -1.51
LTN1-202ENST00000389194 CKAP4Q07065 602 aaKnown RBP5.6□□□□□ -1.51
LTN1-202ENST00000389194 CAPN12Q6ZSI9 719 aa5.6□□□□□ -1.51
LTN1-202ENST00000389194 RRAGAQ7L523 313 aa5.6□□□□□ -1.51
LTN1-202ENST00000389194 C2CD5Q86YS7 1000 aa5.6□□□□□ -1.51
LTN1-202ENST00000389194 PPP1R14CQ8TAE6 165 aa5.6□□□□□ -1.51
LTN1-202ENST00000389194 MGARPQ8TDB4 240 aa5.6□□□□□ -1.51
LTN1-202ENST00000389194 SNX29Q8TEQ0 813 aa5.6□□□□□ -1.51
LTN1-202ENST00000389194 ZNF526Q8TF50 670 aaPredicted RBP5.6□□□□□ -1.51
LTN1-202ENST00000389194 JAKMIP2Q96AA8 810 aa5.6□□□□□ -1.51
LTN1-202ENST00000389194 PCDH11XQ9BZA7 1347 aa5.59□□□□□ -1.51
LTN1-202ENST00000389194 PCDH11YQ9BZA8 1340 aa5.59□□□□□ -1.51
LTN1-202ENST00000389194 PDE8AO60658 829 aa5.59□□□□□ -1.51
LTN1-202ENST00000389194 CFBP00751 764 aa5.59□□□□□ -1.51
LTN1-202ENST00000389194 ARL1P40616 181 aaPredicted RBP5.59□□□□□ -1.51
LTN1-202ENST00000389194 UBXN2AP68543 259 aa5.59□□□□□ -1.51
LTN1-202ENST00000389194 GSTO1P78417 241 aa5.59□□□□□ -1.51
LTN1-202ENST00000389194 PAK1Q13153 545 aa5.59□□□□□ -1.51
LTN1-202ENST00000389194 PPP2R5DQ14738 602 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms