RNA–Protein interactions for RNA: ENST00000380494.9

COL4A3BP-203, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2 BASIC

Gene COL4A3BP, Length 5,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-203ENST00000380494 CEP104O60308 925 aa19.03■□□□□ 0.64
COL4A3BP-203ENST00000380494 MICAL1Q8TDZ2 1067 aa19.03■□□□□ 0.64
COL4A3BP-203ENST00000380494 RIMS2Q9UQ26 1411 aa19.02■□□□□ 0.64
COL4A3BP-203ENST00000380494 BCAS4Q8TDM0 211 aa19.02■□□□□ 0.64
COL4A3BP-203ENST00000380494 RAPGEF3O95398 923 aa19.02■□□□□ 0.64
COL4A3BP-203ENST00000380494 KRT71Q3SY84 523 aa19.02■□□□□ 0.64
COL4A3BP-203ENST00000380494 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.02■□□□□ 0.64
COL4A3BP-203ENST00000380494 DDX21Q9NR30 783 aaKnown RBP eCLIP19.02■□□□□ 0.64
COL4A3BP-203ENST00000380494 NBPF14Q5TI25 921 aa19.02■□□□□ 0.64
COL4A3BP-203ENST00000380494 KLHL7Q8IXQ5 586 aa19.02■□□□□ 0.64
COL4A3BP-203ENST00000380494 NELFBQ8WX92 580 aa19.02■□□□□ 0.64
COL4A3BP-203ENST00000380494 CTNNA1P35221 906 aaKnown RBP19.02■□□□□ 0.63
COL4A3BP-203ENST00000380494 OTUD7AQ8TE49 926 aaPredicted RBP19.02■□□□□ 0.63
COL4A3BP-203ENST00000380494 PPANQ9NQ55 473 aaKnown RBP19.02■□□□□ 0.63
COL4A3BP-203ENST00000380494 TAB2Q9NYJ8 693 aa19.02■□□□□ 0.63
COL4A3BP-203ENST00000380494 ANGEL1Q9UNK9 670 aaKnown RBP19.02■□□□□ 0.63
COL4A3BP-203ENST00000380494 KDM5BQ9UGL1 1544 aa19.01■□□□□ 0.63
COL4A3BP-203ENST00000380494 FLOT1O75955 427 aa19.01■□□□□ 0.63
COL4A3BP-203ENST00000380494 MAP3K21Q5TCX8 1036 aa19.01■□□□□ 0.63
COL4A3BP-203ENST00000380494 I3L4J1 428 aa19.01■□□□□ 0.63
COL4A3BP-203ENST00000380494 ARID4AP29374 1257 aaPredicted RBP19.01■□□□□ 0.63
COL4A3BP-203ENST00000380494 TRIML1Q8N9V2 468 aa19.01■□□□□ 0.63
COL4A3BP-203ENST00000380494 MPHOSPH6Q99547 160 aaKnown RBP19.01■□□□□ 0.63
COL4A3BP-203ENST00000380494 MAK16Q9BXY0 300 aaKnown RBP19.01■□□□□ 0.63
COL4A3BP-203ENST00000380494 TDRD7Q8NHU6 1098 aaKnown RBP19.01■□□□□ 0.63
COL4A3BP-203ENST00000380494 IFIH1Q9BYX4 1025 aaKnown RBP19.01■□□□□ 0.63
COL4A3BP-203ENST00000380494 KLHL14Q9P2G3 628 aa19.01■□□□□ 0.63
COL4A3BP-203ENST00000380494 LIG3P49916 1009 aa19.01■□□□□ 0.63
COL4A3BP-203ENST00000380494 RBM6P78332 1123 aaKnown RBP19.01■□□□□ 0.63
COL4A3BP-203ENST00000380494 MTHFSDQ2M296 383 aaKnown RBP19.01■□□□□ 0.63
COL4A3BP-203ENST00000380494 GAS2L3Q86XJ1 694 aa19.01■□□□□ 0.63
COL4A3BP-203ENST00000380494 JARID2Q92833 1246 aaPredicted RBP19.01■□□□□ 0.63
COL4A3BP-203ENST00000380494 SPATS2LQ9NUQ6 558 aaKnown RBP19.01■□□□□ 0.63
COL4A3BP-203ENST00000380494 DDX41Q9UJV9 622 aaKnown RBP19.01■□□□□ 0.63
COL4A3BP-203ENST00000380494 SBNO2Q9Y2G9 1366 aa19.01■□□□□ 0.63
COL4A3BP-203ENST00000380494 SFMBT2Q5VUG0 894 aa19■□□□□ 0.63
COL4A3BP-203ENST00000380494 NBPF6Q5VWK0 638 aa19■□□□□ 0.63
COL4A3BP-203ENST00000380494 PPP1R13BQ96KQ4 1090 aa19■□□□□ 0.63
COL4A3BP-203ENST00000380494 NBPF4Q96M43 638 aa19■□□□□ 0.63
COL4A3BP-203ENST00000380494 FAM114A2Q9NRY5 505 aa19■□□□□ 0.63
COL4A3BP-203ENST00000380494 HOMER3Q9NSC5 361 aa19■□□□□ 0.63
COL4A3BP-203ENST00000380494 FLT4P35916 1363 aa19■□□□□ 0.63
COL4A3BP-203ENST00000380494 A0A087WUV0 522 aaPredicted RBP19■□□□□ 0.63
COL4A3BP-203ENST00000380494 BICC1Q9H694 974 aaKnown RBP19■□□□□ 0.63
COL4A3BP-203ENST00000380494 LARSQ9P2J5 1176 aaKnown RBP19■□□□□ 0.63
COL4A3BP-203ENST00000380494 SPDYE3A6NKU9 549 aa19■□□□□ 0.63
COL4A3BP-203ENST00000380494 RGS16O15492 202 aaPredicted RBP19■□□□□ 0.63
COL4A3BP-203ENST00000380494 FAN1Q9Y2M0 1017 aa19■□□□□ 0.63
COL4A3BP-203ENST00000380494 FAM135BQ49AJ0 1406 aa19■□□□□ 0.63
COL4A3BP-203ENST00000380494 ZWINTO95229 277 aa19■□□□□ 0.63
COL4A3BP-203ENST00000380494 TTC38Q5R3I4 469 aa19■□□□□ 0.63
COL4A3BP-203ENST00000380494 LIN9Q5TKA1 542 aa19■□□□□ 0.63
COL4A3BP-203ENST00000380494 MAGEB6Q8N7X4 407 aa19■□□□□ 0.63
COL4A3BP-203ENST00000380494 HAUS4Q9H6D7 363 aa19■□□□□ 0.63
COL4A3BP-203ENST00000380494 PDE11AQ9HCR9 933 aa18.99■□□□□ 0.63
COL4A3BP-203ENST00000380494 MYO1AQ9UBC5 1043 aa18.99■□□□□ 0.63
COL4A3BP-203ENST00000380494 PYCARDQ9ULZ3 195 aa18.99■□□□□ 0.63
COL4A3BP-203ENST00000380494 TROVE2P10155 538 aaKnown RBP eCLIP18.99■□□□□ 0.63
COL4A3BP-203ENST00000380494 IDI1Q13907 227 aa18.99■□□□□ 0.63
COL4A3BP-203ENST00000380494 LGSNQ5TDP6 509 aa18.99■□□□□ 0.63
COL4A3BP-203ENST00000380494 FAM173BQ6P4H8 233 aa18.99■□□□□ 0.63
COL4A3BP-203ENST00000380494 SRGAP1Q7Z6B7 1085 aa18.99■□□□□ 0.63
COL4A3BP-203ENST00000380494 SMC1BQ8NDV3 1235 aa18.99■□□□□ 0.63
COL4A3BP-203ENST00000380494 EXOC4Q96A65 974 aa18.99■□□□□ 0.63
COL4A3BP-203ENST00000380494 ZKSCAN3Q9BRR0 538 aa18.99■□□□□ 0.63
COL4A3BP-203ENST00000380494 VEZTQ9HBM0 779 aa18.99■□□□□ 0.63
COL4A3BP-203ENST00000380494 STX10O60499 249 aa18.99■□□□□ 0.63
COL4A3BP-203ENST00000380494 TNNI2P48788 182 aa18.99■□□□□ 0.63
COL4A3BP-203ENST00000380494 CETN3O15182 167 aa18.99■□□□□ 0.63
COL4A3BP-203ENST00000380494 TCP1P17987 556 aaKnown RBP18.98■□□□□ 0.63
COL4A3BP-203ENST00000380494 RXRAP19793 462 aa18.98■□□□□ 0.63
COL4A3BP-203ENST00000380494 UAP1Q16222 522 aaPredicted RBP18.98■□□□□ 0.63
COL4A3BP-203ENST00000380494 DIS3L2Q8IYB7 885 aaKnown RBP18.98■□□□□ 0.63
COL4A3BP-203ENST00000380494 AFAP1L2Q8N4X5 818 aa18.98■□□□□ 0.63
COL4A3BP-203ENST00000380494 P3H4Q92791 437 aa18.98■□□□□ 0.63
COL4A3BP-203ENST00000380494 NUF2Q9BZD4 464 aa18.98■□□□□ 0.63
COL4A3BP-203ENST00000380494 AMOTL2Q9Y2J4 779 aa18.98■□□□□ 0.63
COL4A3BP-203ENST00000380494 RBBP5Q15291 538 aaKnown RBP18.98■□□□□ 0.63
COL4A3BP-203ENST00000380494 ADKP55263 362 aaKnown RBP18.98■□□□□ 0.63
COL4A3BP-203ENST00000380494 LRMPQ12912 555 aa18.98■□□□□ 0.63
COL4A3BP-203ENST00000380494 SEPT14Q6ZU15 432 aa18.98■□□□□ 0.63
COL4A3BP-203ENST00000380494 OR8K1Q8NGG5 319 aa18.98■□□□□ 0.63
COL4A3BP-203ENST00000380494 ZNF526Q8TF50 670 aaPredicted RBP18.98■□□□□ 0.63
COL4A3BP-203ENST00000380494 SDCCAG8Q86SQ7 713 aaPredicted RBP18.98■□□□□ 0.63
COL4A3BP-203ENST00000380494 NUTM2BA6NNL0 878 aaPredicted RBP18.98■□□□□ 0.63
COL4A3BP-203ENST00000380494 NUTM2EB1AL46 878 aaPredicted RBP18.98■□□□□ 0.63
COL4A3BP-203ENST00000380494 GNA14O95837 355 aa18.98■□□□□ 0.63
COL4A3BP-203ENST00000380494 PEX26Q7Z412 305 aa18.98■□□□□ 0.63
COL4A3BP-203ENST00000380494 ABCC1P33527 1531 aa18.98■□□□□ 0.63
COL4A3BP-203ENST00000380494 TNNI3KQ59H18 835 aa18.97■□□□□ 0.63
COL4A3BP-203ENST00000380494 PLIN2Q99541 437 aa18.97■□□□□ 0.63
COL4A3BP-203ENST00000380494 ASIC3Q9UHC3 531 aa18.97■□□□□ 0.63
COL4A3BP-203ENST00000380494 FPGT-TNNI3KV9GXZ4 949 aa18.97■□□□□ 0.63
COL4A3BP-203ENST00000380494 PLCG2P16885 1265 aa18.97■□□□□ 0.63
COL4A3BP-203ENST00000380494 STX2P32856 288 aa18.97■□□□□ 0.63
COL4A3BP-203ENST00000380494 RNASE9P60153 205 aaKnown RBP18.97■□□□□ 0.63
COL4A3BP-203ENST00000380494 LONRF3Q496Y0 759 aa18.97■□□□□ 0.63
COL4A3BP-203ENST00000380494 WDR78Q5VTH9 848 aa18.97■□□□□ 0.63
COL4A3BP-203ENST00000380494 ANKRD20A3Q5VUR7 823 aa18.97■□□□□ 0.63
COL4A3BP-203ENST00000380494 FAM204AQ9H8W3 233 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms