RNA–Protein interactions for RNA: ENST00000377027.1

C9orf85-202, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 3

Gene C9orf85, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-202ENST00000377027 PTPRCP08575 1304 aa12.01□□□□□ -0.49
C9orf85-202ENST00000377027 MROH5Q6ZUA9 1318 aa12.01□□□□□ -0.49
C9orf85-202ENST00000377027 CRKP46108 304 aa12□□□□□ -0.49
C9orf85-202ENST00000377027 SREBF2Q12772 1141 aa12□□□□□ -0.49
C9orf85-202ENST00000377027 DZIP1LQ8IYY4 767 aaKnown RBP12□□□□□ -0.49
C9orf85-202ENST00000377027 TRMT2AQ8IZ69 625 aaKnown RBP12□□□□□ -0.49
C9orf85-202ENST00000377027 TMEM39BQ9GZU3 492 aa12□□□□□ -0.49
C9orf85-202ENST00000377027 IL21Q9HBE4 155 aa12□□□□□ -0.49
C9orf85-202ENST00000377027 E9PSI1 815 aa11.99□□□□□ -0.49
C9orf85-202ENST00000377027 PDE8BO95263 885 aa11.99□□□□□ -0.49
C9orf85-202ENST00000377027 ZBTB48P10074 688 aaPredicted RBP11.99□□□□□ -0.49
C9orf85-202ENST00000377027 RBM5P52756 815 aaKnown RBP eCLIP11.99□□□□□ -0.49
C9orf85-202ENST00000377027 CACNB3P54284 484 aa11.99□□□□□ -0.49
C9orf85-202ENST00000377027 KCNC4Q03721 635 aa11.99□□□□□ -0.49
C9orf85-202ENST00000377027 PUS10Q3MIT2 529 aaKnown RBP11.99□□□□□ -0.49
C9orf85-202ENST00000377027 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.99□□□□□ -0.49
C9orf85-202ENST00000377027 ATG9AQ7Z3C6 839 aa11.99□□□□□ -0.49
C9orf85-202ENST00000377027 KDM4CQ9H3R0 1056 aa11.99□□□□□ -0.49
C9orf85-202ENST00000377027 MANSC4A6NHS7 340 aaPredicted RBP11.98□□□□□ -0.49
C9orf85-202ENST00000377027 TCP10L2B9ZVM9 353 aa11.98□□□□□ -0.49
C9orf85-202ENST00000377027 PPP1R12BO60237 982 aaPredicted RBP11.98□□□□□ -0.49
C9orf85-202ENST00000377027 CHAF1AQ13111 956 aaPredicted RBP11.98□□□□□ -0.49
C9orf85-202ENST00000377027 METTL24Q5JXM2 366 aa11.98□□□□□ -0.49
C9orf85-202ENST00000377027 ZNF516Q92618 1163 aa11.98□□□□□ -0.49
C9orf85-202ENST00000377027 SLC10A4Q96EP9 437 aa11.98□□□□□ -0.49
C9orf85-202ENST00000377027 ELP3Q9H9T3 547 aa11.98□□□□□ -0.49
C9orf85-202ENST00000377027 MYO1BO43795 1136 aa11.97□□□□□ -0.49
C9orf85-202ENST00000377027 FKTNO75072 461 aa11.97□□□□□ -0.49
C9orf85-202ENST00000377027 USP46P62068 366 aa11.97□□□□□ -0.49
C9orf85-202ENST00000377027 CRHR2Q13324 411 aa11.97□□□□□ -0.49
C9orf85-202ENST00000377027 MORN1Q5T089 497 aa11.97□□□□□ -0.49
C9orf85-202ENST00000377027 APOBEC3HQ6NTF7 200 aaKnown RBP11.97□□□□□ -0.49
C9orf85-202ENST00000377027 FBXO46Q6PJ61 603 aaPredicted RBP11.97□□□□□ -0.49
C9orf85-202ENST00000377027 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.97□□□□□ -0.49
C9orf85-202ENST00000377027 DOCK2Q92608 1830 aa11.97□□□□□ -0.49
C9orf85-202ENST00000377027 MYH2Q9UKX2 1941 aa11.96□□□□□ -0.49
C9orf85-202ENST00000377027 KIF16BQ96L93 1317 aa11.96□□□□□ -0.49
C9orf85-202ENST00000377027 UNCXA6NJT0 531 aa11.96□□□□□ -0.49
C9orf85-202ENST00000377027 IREB2P48200 963 aaKnown RBP11.96□□□□□ -0.49
C9orf85-202ENST00000377027 VGLL4Q14135 290 aa11.96□□□□□ -0.49
C9orf85-202ENST00000377027 PKN2Q16513 984 aaKnown RBP11.96□□□□□ -0.49
C9orf85-202ENST00000377027 ALDH1L2Q3SY69 923 aa11.96□□□□□ -0.49
C9orf85-202ENST00000377027 SUPT20HL1Q3ZLR7 823 aa11.96□□□□□ -0.49
C9orf85-202ENST00000377027 OTOP1Q7RTM1 612 aa11.96□□□□□ -0.49
C9orf85-202ENST00000377027 ANKRD13AQ8IZ07 590 aa11.96□□□□□ -0.49
C9orf85-202ENST00000377027 SPIRE2Q8WWL2 714 aa11.96□□□□□ -0.49
C9orf85-202ENST00000377027 BRI3BPQ8WY22 251 aa11.96□□□□□ -0.49
C9orf85-202ENST00000377027 OPTNQ96CV9 577 aa11.96□□□□□ -0.49
C9orf85-202ENST00000377027 SNCAIPQ9Y6H5 919 aa11.96□□□□□ -0.49
C9orf85-202ENST00000377027 EYA2O00167 538 aa11.95□□□□□ -0.5
C9orf85-202ENST00000377027 NR1I2O75469 434 aa11.95□□□□□ -0.5
C9orf85-202ENST00000377027 HDLBPQ00341 1268 aaKnown RBP11.95□□□□□ -0.5
C9orf85-202ENST00000377027 PUM3Q15397 648 aaKnown RBP11.95□□□□□ -0.5
C9orf85-202ENST00000377027 SCUBE3Q8IX30 993 aa11.95□□□□□ -0.5
C9orf85-202ENST00000377027 ZDHHC15Q96MV8 337 aa11.95□□□□□ -0.5
C9orf85-202ENST00000377027 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.95□□□□□ -0.5
C9orf85-202ENST00000377027 PTPRFP10586 1907 aa11.95□□□□□ -0.5
C9orf85-202ENST00000377027 PHIPQ8WWQ0 1821 aa11.95□□□□□ -0.5
C9orf85-202ENST00000377027 RPAP1Q9BWH6 1393 aaPredicted RBP11.94□□□□□ -0.5
C9orf85-202ENST00000377027 HOXA2O43364 376 aa11.94□□□□□ -0.5
C9orf85-202ENST00000377027 ALDH1A1P00352 501 aa11.94□□□□□ -0.5
C9orf85-202ENST00000377027 INHBEP58166 350 aa11.94□□□□□ -0.5
C9orf85-202ENST00000377027 TNFAIP1Q13829 316 aa11.94□□□□□ -0.5
C9orf85-202ENST00000377027 FAM43AQ8N2R8 423 aa11.94□□□□□ -0.5
C9orf85-202ENST00000377027 CD99L2Q8TCZ2 262 aa11.94□□□□□ -0.5
C9orf85-202ENST00000377027 SMC4Q9NTJ3 1288 aa11.94□□□□□ -0.5
C9orf85-202ENST00000377027 PA2G4Q9UQ80 394 aaKnown RBP11.94□□□□□ -0.5
C9orf85-202ENST00000377027 TRIM17Q9Y577 477 aa11.94□□□□□ -0.5
C9orf85-202ENST00000377027 AK9Q5TCS8 1911 aa11.94□□□□□ -0.5
C9orf85-202ENST00000377027 RFX7Q2KHR2 1363 aa11.93□□□□□ -0.5
C9orf85-202ENST00000377027 PRDX5P30044 214 aa11.93□□□□□ -0.5
C9orf85-202ENST00000377027 DIXDC1Q155Q3 683 aa11.93□□□□□ -0.5
C9orf85-202ENST00000377027 CAVIN4Q5BKX8 364 aa11.93□□□□□ -0.5
C9orf85-202ENST00000377027 VPS37DQ86XT2 251 aa11.93□□□□□ -0.5
C9orf85-202ENST00000377027 TBC1D22AQ8WUA7 517 aa11.93□□□□□ -0.5
C9orf85-202ENST00000377027 TEKT1Q969V4 418 aa11.93□□□□□ -0.5
C9orf85-202ENST00000377027 SIL1Q9H173 461 aa11.93□□□□□ -0.5
C9orf85-202ENST00000377027 NOB1Q9ULX3 412 aaKnown RBP11.93□□□□□ -0.5
C9orf85-202ENST00000377027 TNNQ9UQP3 1299 aa11.93□□□□□ -0.5
C9orf85-202ENST00000377027 SLC27A5Q9Y2P5 690 aa11.93□□□□□ -0.5
C9orf85-202ENST00000377027 KIAA0100Q14667 2235 aaKnown RBP11.92□□□□□ -0.5
C9orf85-202ENST00000377027 ATRNL1Q5VV63 1379 aa11.92□□□□□ -0.5
C9orf85-202ENST00000377027 SPDYE5A6NIY4 337 aa11.92□□□□□ -0.5
C9orf85-202ENST00000377027 ADORA1P30542 326 aa11.92□□□□□ -0.5
C9orf85-202ENST00000377027 NFIAQ12857 509 aa11.92□□□□□ -0.5
C9orf85-202ENST00000377027 HHIPL2Q6UWX4 724 aa11.92□□□□□ -0.5
C9orf85-202ENST00000377027 FAM83AQ86UY5 434 aa11.92□□□□□ -0.5
C9orf85-202ENST00000377027 LPIN2Q92539 896 aa11.92□□□□□ -0.5
C9orf85-202ENST00000377027 HLA-CQ95604 372 aa11.92□□□□□ -0.5
C9orf85-202ENST00000377027 ZKSCAN4Q969J2 545 aaPredicted RBP11.92□□□□□ -0.5
C9orf85-202ENST00000377027 MEIS3Q99687 375 aa11.92□□□□□ -0.5
C9orf85-202ENST00000377027 MRIQ9BWK5 157 aa11.92□□□□□ -0.5
C9orf85-202ENST00000377027 TBC1D2Q9BYX2 928 aa11.92□□□□□ -0.5
C9orf85-202ENST00000377027 PTPN22Q9Y2R2 807 aa11.92□□□□□ -0.5
C9orf85-202ENST00000377027 DAGLAQ9Y4D2 1042 aa11.92□□□□□ -0.5
C9orf85-202ENST00000377027 LRRFIP2Q9Y608 721 aaKnown RBP11.92□□□□□ -0.5
C9orf85-202ENST00000377027 MYO5AQ9Y4I1 1855 aaKnown RBP11.91□□□□□ -0.5
C9orf85-202ENST00000377027 CCL15-CCL14A0A0B4J2E2 113 aa11.91□□□□□ -0.5
C9orf85-202ENST00000377027 IFIT1P09914 478 aaKnown RBP11.91□□□□□ -0.5
C9orf85-202ENST00000377027 SLURP2P0DP57 97 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms