RNA–Protein interactions for RNA: ENST00000376836.7

COMMD3-201, Transcript of COMM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COMMD3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-201ENST00000376836 TRIM6-TRIM34B2RNG4 842 aa32.65■■■□□ 2.82
COMMD3-201ENST00000376836 CTNND1O60716 968 aaKnown RBP32.65■■■□□ 2.82
COMMD3-201ENST00000376836 POLR3DP05423 398 aaPredicted RBP32.65■■■□□ 2.82
COMMD3-201ENST00000376836 NOL9Q5SY16 702 aaKnown RBP32.65■■■□□ 2.82
COMMD3-201ENST00000376836 PUS7LQ9H0K6 701 aaKnown RBP32.65■■■□□ 2.82
COMMD3-201ENST00000376836 OSBPL3Q9H4L5 887 aa32.65■■■□□ 2.82
COMMD3-201ENST00000376836 CHGBP05060 677 aa32.64■■■□□ 2.82
COMMD3-201ENST00000376836 TM4SF4P48230 202 aa32.64■■■□□ 2.82
COMMD3-201ENST00000376836 CTCFP49711 727 aaPredicted RBP32.64■■■□□ 2.82
COMMD3-201ENST00000376836 ATP8A2Q9NTI2 1148 aa32.64■■■□□ 2.82
COMMD3-201ENST00000376836 MCM9Q9NXL9 1143 aa32.64■■■□□ 2.82
COMMD3-201ENST00000376836 PPATQ06203 517 aa32.63■■■□□ 2.81
COMMD3-201ENST00000376836 AMOTL1Q8IY63 956 aa32.63■■■□□ 2.81
COMMD3-201ENST00000376836 SCYL3Q8IZE3 742 aa32.63■■■□□ 2.81
COMMD3-201ENST00000376836 SDR42E1Q8WUS8 393 aa32.63■■■□□ 2.81
COMMD3-201ENST00000376836 SLC4A4Q9Y6R1 1079 aa32.63■■■□□ 2.81
COMMD3-201ENST00000376836 FOXN1O15353 648 aa32.62■■■□□ 2.81
COMMD3-201ENST00000376836 GTF2A2P52657 109 aa32.62■■■□□ 2.81
COMMD3-201ENST00000376836 SLC4A8Q2Y0W8 1093 aa32.62■■■□□ 2.81
COMMD3-201ENST00000376836 OTOFQ9HC10 1997 aa32.62■■■□□ 2.81
COMMD3-201ENST00000376836 MYH7P12883 1935 aa32.61■■■□□ 2.81
COMMD3-201ENST00000376836 FAM196BA6NMK8 535 aa32.61■■■□□ 2.81
COMMD3-201ENST00000376836 GJA5P36382 358 aa32.61■■■□□ 2.81
COMMD3-201ENST00000376836 PPIL2Q13356 520 aa32.61■■■□□ 2.81
COMMD3-201ENST00000376836 CNKSR2Q8WXI2 1034 aa32.61■■■□□ 2.81
COMMD3-201ENST00000376836 RILPL2Q969X0 211 aa32.61■■■□□ 2.81
COMMD3-201ENST00000376836 DCP1AQ9NPI6 582 aaPredicted RBP32.61■■■□□ 2.81
COMMD3-201ENST00000376836 FOCADQ5VW36 1801 aa32.6■■■□□ 2.81
COMMD3-201ENST00000376836 OTUD7BQ6GQQ9 843 aa32.6■■■□□ 2.81
COMMD3-201ENST00000376836 TICAM2Q86XR7 235 aa32.6■■■□□ 2.81
COMMD3-201ENST00000376836 OSBP2Q969R2 916 aa32.6■■■□□ 2.81
COMMD3-201ENST00000376836 SAGE1Q9NXZ1 904 aa32.6■■■□□ 2.81
COMMD3-201ENST00000376836 PRKAB2O43741 272 aa32.59■■■□□ 2.81
COMMD3-201ENST00000376836 SLURP2P0DP57 97 aa32.59■■■□□ 2.81
COMMD3-201ENST00000376836 GNAT2P19087 354 aa32.59■■■□□ 2.81
COMMD3-201ENST00000376836 COL13A1Q5TAT6 717 aaPredicted RBP32.59■■■□□ 2.81
COMMD3-201ENST00000376836 METTL16Q86W50 562 aaKnown RBP32.59■■■□□ 2.81
COMMD3-201ENST00000376836 STRBPQ96SI9 672 aaKnown RBP32.59■■■□□ 2.81
COMMD3-201ENST00000376836 SERPINB13Q9UIV8 391 aa32.59■■■□□ 2.81
COMMD3-201ENST00000376836 CDK5RAP2Q96SN8 1893 aa32.59■■■□□ 2.81
COMMD3-201ENST00000376836 TRPA1O75762 1119 aa32.58■■■□□ 2.81
COMMD3-201ENST00000376836 EHD4Q9H223 541 aa32.58■■■□□ 2.81
COMMD3-201ENST00000376836 RNF186Q9NXI6 227 aa32.58■■■□□ 2.81
COMMD3-201ENST00000376836 ALDH1A1P00352 501 aa32.57■■■□□ 2.8
COMMD3-201ENST00000376836 SNAPC2Q13487 334 aa32.57■■■□□ 2.8
COMMD3-201ENST00000376836 CENPQQ7L2Z9 268 aaPredicted RBP32.57■■■□□ 2.8
COMMD3-201ENST00000376836 GPAA1O43292 621 aa32.56■■■□□ 2.8
COMMD3-201ENST00000376836 CETPP11597 493 aa32.56■■■□□ 2.8
COMMD3-201ENST00000376836 CAP2P40123 477 aa32.56■■■□□ 2.8
COMMD3-201ENST00000376836 ZMYM1Q5SVZ6 1142 aa32.56■■■□□ 2.8
COMMD3-201ENST00000376836 IRF6O14896 467 aa32.55■■■□□ 2.8
COMMD3-201ENST00000376836 PTPRAP18433 802 aa32.55■■■□□ 2.8
COMMD3-201ENST00000376836 ZHX2Q9Y6X8 837 aa32.55■■■□□ 2.8
COMMD3-201ENST00000376836 CCL15-CCL14A0A0B4J2E2 113 aa32.54■■■□□ 2.8
COMMD3-201ENST00000376836 M0R2C6 588 aa32.54■■■□□ 2.8
COMMD3-201ENST00000376836 PLCD1P51178 756 aa32.54■■■□□ 2.8
COMMD3-201ENST00000376836 CCL15Q16663 113 aa32.54■■■□□ 2.8
COMMD3-201ENST00000376836 IFNL1Q8IU54 200 aa32.54■■■□□ 2.8
COMMD3-201ENST00000376836 MYH1P12882 1939 aa32.54■■■□□ 2.8
COMMD3-201ENST00000376836 APPP05067 770 aa32.53■■■□□ 2.8
COMMD3-201ENST00000376836 HSPA8P11142 646 aaKnown RBP32.53■■■□□ 2.8
COMMD3-201ENST00000376836 PDE4AP27815 886 aa32.53■■■□□ 2.8
COMMD3-201ENST00000376836 GIMAP6Q6P9H5 292 aa32.53■■■□□ 2.8
COMMD3-201ENST00000376836 CCDC136Q96JN2 1154 aa32.53■■■□□ 2.8
COMMD3-201ENST00000376836 MS4A4AQ96JQ5 239 aa32.53■■■□□ 2.8
COMMD3-201ENST00000376836 GINM1Q9NU53 330 aa32.53■■■□□ 2.8
COMMD3-201ENST00000376836 TSKSQ9UJT2 592 aa32.53■■■□□ 2.8
COMMD3-201ENST00000376836 TESPA1A2RU30 521 aaPredicted RBP32.52■■■□□ 2.8
COMMD3-201ENST00000376836 LBX1P52954 281 aa32.52■■■□□ 2.8
COMMD3-201ENST00000376836 TBC1D2Q9BYX2 928 aa32.52■■■□□ 2.8
COMMD3-201ENST00000376836 NACAP1Q9BZK3 213 aa32.52■■■□□ 2.8
COMMD3-201ENST00000376836 DNAJC18Q9H819 358 aa32.52■■■□□ 2.8
COMMD3-201ENST00000376836 TAOK2Q9UL54 1235 aa32.52■■■□□ 2.8
COMMD3-201ENST00000376836 CXCL11O14625 94 aa32.51■■■□□ 2.8
COMMD3-201ENST00000376836 ASNSP08243 561 aa32.51■■■□□ 2.8
COMMD3-201ENST00000376836 HELLSQ9NRZ9 838 aa32.51■■■□□ 2.8
COMMD3-201ENST00000376836 ARPP21Q9UBL0 812 aaPredicted RBP32.51■■■□□ 2.8
COMMD3-201ENST00000376836 NAV1Q8NEY1 1877 aa32.51■■■□□ 2.79
COMMD3-201ENST00000376836 PATL2C9JE40 543 aaKnown RBP32.51■■■□□ 2.79
COMMD3-201ENST00000376836 USP17L12C9JPN9 530 aa32.51■■■□□ 2.79
COMMD3-201ENST00000376836 USP17L21D6R901 530 aa32.51■■■□□ 2.79
COMMD3-201ENST00000376836 SEC62Q99442 399 aaKnown RBP32.51■■■□□ 2.79
COMMD3-201ENST00000376836 AS3MTQ9HBK9 375 aa32.51■■■□□ 2.79
COMMD3-201ENST00000376836 KCNH4Q9UQ05 1017 aa32.51■■■□□ 2.79
COMMD3-201ENST00000376836 USP17L5A8MUK1 530 aa32.5■■■□□ 2.79
COMMD3-201ENST00000376836 CERKLQ49MI3 558 aaPredicted RBP32.5■■■□□ 2.79
COMMD3-201ENST00000376836 PRDM10Q9NQV6 1147 aa32.5■■■□□ 2.79
COMMD3-201ENST00000376836 SWAP70Q9UH65 585 aa32.5■■■□□ 2.79
COMMD3-201ENST00000376836 GSG1L2A8MUP6 293 aa32.49■■■□□ 2.79
COMMD3-201ENST00000376836 HIP1O00291 1037 aa32.49■■■□□ 2.79
COMMD3-201ENST00000376836 TDO2P48775 406 aa32.49■■■□□ 2.79
COMMD3-201ENST00000376836 TATDN1Q6P1N9 297 aa32.49■■■□□ 2.79
COMMD3-201ENST00000376836 BRI3BPQ8WY22 251 aa32.49■■■□□ 2.79
COMMD3-201ENST00000376836 AFG3L2Q9Y4W6 797 aa32.49■■■□□ 2.79
COMMD3-201ENST00000376836 IGF2BP3O00425 579 aaKnown RBP eCLIP32.48■■■□□ 2.79
COMMD3-201ENST00000376836 GDF11O95390 407 aa32.48■■■□□ 2.79
COMMD3-201ENST00000376836 CYP2D6P10635 497 aa32.48■■■□□ 2.79
COMMD3-201ENST00000376836 RRP1BQ14684 758 aaKnown RBP32.48■■■□□ 2.79
COMMD3-201ENST00000376836 MCMDC2Q4G0Z9 681 aa32.48■■■□□ 2.79
COMMD3-201ENST00000376836 C12orf60Q5U649 245 aa32.48■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms