RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.36■□□□□ 0.21
TNFRSF1B-201ENST00000376259 KRT23Q9C075 422 aa16.36■□□□□ 0.21
TNFRSF1B-201ENST00000376259 MKNK2Q9HBH9 465 aa16.36■□□□□ 0.21
TNFRSF1B-201ENST00000376259 AKR1B15C9JRZ8 316 aaPredicted RBP16.36■□□□□ 0.21
TNFRSF1B-201ENST00000376259 EXOC5O00471 708 aa16.36■□□□□ 0.21
TNFRSF1B-201ENST00000376259 IDEP14735 1019 aa16.36■□□□□ 0.21
TNFRSF1B-201ENST00000376259 OAS2P29728 719 aaKnown RBP16.36■□□□□ 0.21
TNFRSF1B-201ENST00000376259 RABL6Q3YEC7 729 aaPredicted RBP16.36■□□□□ 0.21
TNFRSF1B-201ENST00000376259 AKNAD1Q5T1N1 836 aa16.36■□□□□ 0.21
TNFRSF1B-201ENST00000376259 SPECC1LQ69YQ0 1117 aa16.36■□□□□ 0.21
TNFRSF1B-201ENST00000376259 TOGARAM2Q6ZUX3 1019 aa16.36■□□□□ 0.21
TNFRSF1B-201ENST00000376259 LCORLQ8N3X6 602 aa16.36■□□□□ 0.21
TNFRSF1B-201ENST00000376259 NOC3LQ8WTT2 800 aaKnown RBP16.36■□□□□ 0.21
TNFRSF1B-201ENST00000376259 TIGD1Q96MW7 591 aa16.36■□□□□ 0.21
TNFRSF1B-201ENST00000376259 CENPHQ9H3R5 247 aa16.36■□□□□ 0.21
TNFRSF1B-201ENST00000376259 ZMYM6O95789 1325 aa16.36■□□□□ 0.21
TNFRSF1B-201ENST00000376259 ATP6V1AP38606 617 aa16.35■□□□□ 0.21
TNFRSF1B-201ENST00000376259 DNAJC21Q5F1R6 531 aaKnown RBP16.35■□□□□ 0.21
TNFRSF1B-201ENST00000376259 SARM1Q6SZW1 724 aa16.35■□□□□ 0.21
TNFRSF1B-201ENST00000376259 MB21D2Q8IYB1 491 aaPredicted RBP16.35■□□□□ 0.21
TNFRSF1B-201ENST00000376259 BBXQ8WY36 941 aaPredicted RBP16.35■□□□□ 0.21
TNFRSF1B-201ENST00000376259 ARHGAP6O43182 974 aa16.35■□□□□ 0.21
TNFRSF1B-201ENST00000376259 CLSTN1O94985 981 aa16.35■□□□□ 0.21
TNFRSF1B-201ENST00000376259 RBM6P78332 1123 aaKnown RBP16.35■□□□□ 0.21
TNFRSF1B-201ENST00000376259 ZNF654Q8IZM8 581 aa16.35■□□□□ 0.21
TNFRSF1B-201ENST00000376259 RASGRP4Q8TDF6 673 aa16.35■□□□□ 0.21
TNFRSF1B-201ENST00000376259 TRIM47Q96LD4 638 aa16.35■□□□□ 0.21
TNFRSF1B-201ENST00000376259 AK7Q96M32 723 aa16.35■□□□□ 0.21
TNFRSF1B-201ENST00000376259 PDE8BO95263 885 aa16.35■□□□□ 0.21
TNFRSF1B-201ENST00000376259 ADD2P35612 726 aa16.35■□□□□ 0.21
TNFRSF1B-201ENST00000376259 CTSWP56202 376 aa16.35■□□□□ 0.21
TNFRSF1B-201ENST00000376259 UBXN1Q04323 297 aa16.35■□□□□ 0.21
TNFRSF1B-201ENST00000376259 PDE4BQ07343 736 aa16.35■□□□□ 0.21
TNFRSF1B-201ENST00000376259 CCDC178Q5BJE1 867 aa16.35■□□□□ 0.21
TNFRSF1B-201ENST00000376259 RNF41Q9H4P4 317 aaPredicted RBP16.35■□□□□ 0.21
TNFRSF1B-201ENST00000376259 ITSN1Q15811 1721 aa16.35■□□□□ 0.21
TNFRSF1B-201ENST00000376259 CDC25BP30305 580 aa16.34■□□□□ 0.21
TNFRSF1B-201ENST00000376259 UBA7P41226 1012 aa16.34■□□□□ 0.21
TNFRSF1B-201ENST00000376259 CAVIN4Q5BKX8 364 aa16.34■□□□□ 0.21
TNFRSF1B-201ENST00000376259 C10orf67Q8IYJ2 551 aa16.34■□□□□ 0.21
TNFRSF1B-201ENST00000376259 TMEM87BQ96K49 555 aa16.34■□□□□ 0.21
TNFRSF1B-201ENST00000376259 WDR24Q96S15 920 aa16.34■□□□□ 0.21
TNFRSF1B-201ENST00000376259 JADE2Q9NQC1 790 aa16.34■□□□□ 0.21
TNFRSF1B-201ENST00000376259 MAGEB6P1A0A0J9YX57 407 aa16.34■□□□□ 0.21
TNFRSF1B-201ENST00000376259 CCDC194A0A1B0GVG4 234 aa16.34■□□□□ 0.21
TNFRSF1B-201ENST00000376259 ANKRD65E5RJM6 399 aa16.34■□□□□ 0.21
TNFRSF1B-201ENST00000376259 ZMYND10O75800 440 aa16.34■□□□□ 0.21
TNFRSF1B-201ENST00000376259 NOM1Q5C9Z4 860 aaKnown RBP16.34■□□□□ 0.21
TNFRSF1B-201ENST00000376259 MAN1B1Q9UKM7 699 aa16.34■□□□□ 0.21
TNFRSF1B-201ENST00000376259 ENC1O14682 589 aa16.34■□□□□ 0.21
TNFRSF1B-201ENST00000376259 TEX33O43247 280 aa16.34■□□□□ 0.21
TNFRSF1B-201ENST00000376259 CTIFO43310 598 aaKnown RBP16.34■□□□□ 0.21
TNFRSF1B-201ENST00000376259 IBSPP21815 317 aaPredicted RBP16.34■□□□□ 0.21
TNFRSF1B-201ENST00000376259 MRPS25P82663 173 aaKnown RBP16.34■□□□□ 0.21
TNFRSF1B-201ENST00000376259 ZBTB38Q8NAP3 1195 aaPredicted RBP16.34■□□□□ 0.21
TNFRSF1B-201ENST00000376259 ZNHIT6Q9NWK9 470 aaKnown RBP16.34■□□□□ 0.21
TNFRSF1B-201ENST00000376259 AATFQ9NY61 560 aaKnown RBP eCLIP16.34■□□□□ 0.21
TNFRSF1B-201ENST00000376259 HPS5Q9UPZ3 1129 aa16.34■□□□□ 0.21
TNFRSF1B-201ENST00000376259 ERLIN1O75477 346 aa16.33■□□□□ 0.21
TNFRSF1B-201ENST00000376259 PUM3Q15397 648 aaKnown RBP16.33■□□□□ 0.21
TNFRSF1B-201ENST00000376259 RILPL1Q5EBL4 403 aa16.33■□□□□ 0.21
TNFRSF1B-201ENST00000376259 TTLL11Q8NHH1 800 aa16.33■□□□□ 0.21
TNFRSF1B-201ENST00000376259 GOLGA1Q92805 767 aa16.33■□□□□ 0.21
TNFRSF1B-201ENST00000376259 SH2B2O14492 632 aaPredicted RBP16.33■□□□□ 0.2
TNFRSF1B-201ENST00000376259 TRIM21P19474 475 aaKnown RBP16.33■□□□□ 0.2
TNFRSF1B-201ENST00000376259 DYNLL1P63167 89 aaKnown RBP16.33■□□□□ 0.2
TNFRSF1B-201ENST00000376259 HEATR3Q7Z4Q2 680 aa16.33■□□□□ 0.2
TNFRSF1B-201ENST00000376259 NBPF11Q86T75 865 aa16.33■□□□□ 0.2
TNFRSF1B-201ENST00000376259 ACRBPQ8NEB7 543 aa16.33■□□□□ 0.2
TNFRSF1B-201ENST00000376259 CDC5LQ99459 802 aaKnown RBP16.33■□□□□ 0.2
TNFRSF1B-201ENST00000376259 HEG1Q9ULI3 1381 aa16.33■□□□□ 0.2
TNFRSF1B-201ENST00000376259 TNKSO95271 1327 aa16.33■□□□□ 0.2
TNFRSF1B-201ENST00000376259 RASGRF1Q13972 1273 aa16.33■□□□□ 0.2
TNFRSF1B-201ENST00000376259 FANCBQ8NB91 859 aa16.33■□□□□ 0.2
TNFRSF1B-201ENST00000376259 DIP2AQ14689 1571 aa16.33■□□□□ 0.2
TNFRSF1B-201ENST00000376259 MACROD2A1Z1Q3 448 aa16.32■□□□□ 0.2
TNFRSF1B-201ENST00000376259 CASP14P31944 242 aa16.32■□□□□ 0.2
TNFRSF1B-201ENST00000376259 KRT9P35527 623 aa16.32■□□□□ 0.2
TNFRSF1B-201ENST00000376259 STAT6P42226 847 aa16.32■□□□□ 0.2
TNFRSF1B-201ENST00000376259 MTIF2P46199 727 aaKnown RBP16.32■□□□□ 0.2
TNFRSF1B-201ENST00000376259 CHMP4BP1P59074 171 aa16.32■□□□□ 0.2
TNFRSF1B-201ENST00000376259 METTL16Q86W50 562 aaKnown RBP16.32■□□□□ 0.2
TNFRSF1B-201ENST00000376259 CCDC47Q96A33 483 aaKnown RBP16.32■□□□□ 0.2
TNFRSF1B-201ENST00000376259 CNNM2Q9H8M5 875 aa16.32■□□□□ 0.2
TNFRSF1B-201ENST00000376259 SYNRGQ9UMZ2 1314 aa16.32■□□□□ 0.2
TNFRSF1B-201ENST00000376259 SMIM22K7EJ46 135 aa16.32■□□□□ 0.2
TNFRSF1B-201ENST00000376259 TFRCP02786 760 aaKnown RBP16.32■□□□□ 0.2
TNFRSF1B-201ENST00000376259 CAPN2P17655 700 aa16.32■□□□□ 0.2
TNFRSF1B-201ENST00000376259 CALCOCO1Q9P1Z2 691 aa16.32■□□□□ 0.2
TNFRSF1B-201ENST00000376259 PATL2C9JE40 543 aaKnown RBP16.32■□□□□ 0.2
TNFRSF1B-201ENST00000376259 USP17L12C9JPN9 530 aa16.32■□□□□ 0.2
TNFRSF1B-201ENST00000376259 USP17L21D6R901 530 aa16.32■□□□□ 0.2
TNFRSF1B-201ENST00000376259 PNMA6AP0CW24 399 aaPredicted RBP16.32■□□□□ 0.2
TNFRSF1B-201ENST00000376259 KRT2P35908 639 aa16.32■□□□□ 0.2
TNFRSF1B-201ENST00000376259 FMR1Q06787 632 aaKnown RBP eCLIP16.32■□□□□ 0.2
TNFRSF1B-201ENST00000376259 SMC1AQ14683 1233 aaKnown RBP16.32■□□□□ 0.2
TNFRSF1B-201ENST00000376259 TERF2Q15554 542 aa16.32■□□□□ 0.2
TNFRSF1B-201ENST00000376259 DZIP1Q86YF9 867 aaKnown RBP16.32■□□□□ 0.2
TNFRSF1B-201ENST00000376259 PIGBQ92521 554 aa16.32■□□□□ 0.2
TNFRSF1B-201ENST00000376259 CDK5RAP3Q96JB5 506 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 200.2 ms