RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 IDH1O75874 414 aaKnown RBP17.38■□□□□ 0.37
NELFE-201ENST00000375425 FMNL1O95466 1100 aaPredicted RBP17.38■□□□□ 0.37
NELFE-201ENST00000375425 EN2P19622 333 aaPredicted RBP17.38■□□□□ 0.37
NELFE-201ENST00000375425 PRMT2P55345 433 aa17.38■□□□□ 0.37
NELFE-201ENST00000375425 RRP1BQ14684 758 aaKnown RBP17.38■□□□□ 0.37
NELFE-201ENST00000375425 AACSQ86V21 672 aa17.38■□□□□ 0.37
NELFE-201ENST00000375425 MAPKAPK5Q8IW41 473 aa17.38■□□□□ 0.37
NELFE-201ENST00000375425 RHPN1Q8TCX5 695 aa17.38■□□□□ 0.37
NELFE-201ENST00000375425 TMEM106CQ9BVX2 250 aa17.38■□□□□ 0.37
NELFE-201ENST00000375425 DHX36Q9H2U1 1008 aaKnown RBP17.38■□□□□ 0.37
NELFE-201ENST00000375425 IL1RAPL2Q9NP60 686 aa17.38■□□□□ 0.37
NELFE-201ENST00000375425 HERC5Q9UII4 1024 aaKnown RBP17.38■□□□□ 0.37
NELFE-201ENST00000375425 SLC45A1Q9Y2W3 748 aa17.38■□□□□ 0.37
NELFE-201ENST00000375425 PDE4DIPQ5VU43 2346 aa17.38■□□□□ 0.37
NELFE-201ENST00000375425 COL2A1P02458 1487 aaPredicted RBP17.38■□□□□ 0.37
NELFE-201ENST00000375425 DOCK2Q92608 1830 aa17.38■□□□□ 0.37
NELFE-201ENST00000375425 BCRP11274 1271 aa17.38■□□□□ 0.37
NELFE-201ENST00000375425 CYP7A1P22680 504 aa17.38■□□□□ 0.37
NELFE-201ENST00000375425 HOXD10P28358 340 aa17.38■□□□□ 0.37
NELFE-201ENST00000375425 CAP2P40123 477 aa17.38■□□□□ 0.37
NELFE-201ENST00000375425 SPP2Q13103 211 aa17.38■□□□□ 0.37
NELFE-201ENST00000375425 HSP90AB4PQ58FF6 505 aa17.38■□□□□ 0.37
NELFE-201ENST00000375425 RPAP2Q8IXW5 612 aaPredicted RBP17.38■□□□□ 0.37
NELFE-201ENST00000375425 SH3TC2Q8TF17 1288 aa17.38■□□□□ 0.37
NELFE-201ENST00000375425 ANTXR1Q9H6X2 564 aa17.38■□□□□ 0.37
NELFE-201ENST00000375425 ZBTB40Q9NUA8 1239 aa17.38■□□□□ 0.37
NELFE-201ENST00000375425 SRRDQ9UH36 339 aa17.38■□□□□ 0.37
NELFE-201ENST00000375425 DDX19BQ9UMR2 479 aa17.38■□□□□ 0.37
NELFE-201ENST00000375425 MYCP01106 439 aaPredicted RBP17.37■□□□□ 0.37
NELFE-201ENST00000375425 OSBPP22059 807 aa17.37■□□□□ 0.37
NELFE-201ENST00000375425 DYNLL1P63167 89 aaKnown RBP17.37■□□□□ 0.37
NELFE-201ENST00000375425 ZNF280CQ8ND82 737 aa17.37■□□□□ 0.37
NELFE-201ENST00000375425 RCAN3Q9UKA8 241 aa17.37■□□□□ 0.37
NELFE-201ENST00000375425 PALD1Q9ULE6 856 aa17.37■□□□□ 0.37
NELFE-201ENST00000375425 FLT1P17948 1338 aa17.37■□□□□ 0.37
NELFE-201ENST00000375425 USP17L5A8MUK1 530 aa17.36■□□□□ 0.37
NELFE-201ENST00000375425 APBB1O00213 710 aa17.36■□□□□ 0.37
NELFE-201ENST00000375425 SLC4A8Q2Y0W8 1093 aa17.36■□□□□ 0.37
NELFE-201ENST00000375425 FOXP4Q8IVH2 680 aaPredicted RBP17.36■□□□□ 0.37
NELFE-201ENST00000375425 SIRT2Q8IXJ6 389 aa17.36■□□□□ 0.37
NELFE-201ENST00000375425 MAGEB6Q8N7X4 407 aa17.36■□□□□ 0.37
NELFE-201ENST00000375425 AGTPBP1Q9UPW5 1226 aa17.36■□□□□ 0.37
NELFE-201ENST00000375425 KIAA0100Q14667 2235 aaKnown RBP17.35■□□□□ 0.37
NELFE-201ENST00000375425 TREML2Q5T2D2 321 aa17.35■□□□□ 0.37
NELFE-201ENST00000375425 PRPF38BQ5VTL8 546 aaKnown RBP17.35■□□□□ 0.37
NELFE-201ENST00000375425 METTL16Q86W50 562 aaKnown RBP17.35■□□□□ 0.37
NELFE-201ENST00000375425 CLASRPQ8N2M8 674 aaKnown RBP17.35■□□□□ 0.37
NELFE-201ENST00000375425 MIGA1Q8NAN2 632 aa17.35■□□□□ 0.37
NELFE-201ENST00000375425 RAET1EQ8TD07 263 aa17.35■□□□□ 0.37
NELFE-201ENST00000375425 TBC1D2Q9BYX2 928 aa17.35■□□□□ 0.37
NELFE-201ENST00000375425 SAP30BPQ9UHR5 308 aaKnown RBP17.35■□□□□ 0.37
NELFE-201ENST00000375425 HMMRO75330 724 aa17.34■□□□□ 0.37
NELFE-201ENST00000375425 FCGRTP55899 365 aa17.34■□□□□ 0.37
NELFE-201ENST00000375425 MAP3K12Q12852 859 aa17.34■□□□□ 0.37
NELFE-201ENST00000375425 SMCR8Q8TEV9 937 aaPredicted RBP17.34■□□□□ 0.37
NELFE-201ENST00000375425 KIF1BPQ96EK5 621 aa17.34■□□□□ 0.37
NELFE-201ENST00000375425 TRIM34Q9BYJ4 488 aa17.34■□□□□ 0.37
NELFE-201ENST00000375425 DNAJC18Q9H819 358 aa17.34■□□□□ 0.37
NELFE-201ENST00000375425 MYPNQ86TC9 1320 aa17.33■□□□□ 0.37
NELFE-201ENST00000375425 HMGCS2P54868 508 aa17.33■□□□□ 0.36
NELFE-201ENST00000375425 JAG1P78504 1218 aa17.33■□□□□ 0.36
NELFE-201ENST00000375425 CRACR2BQ8N4Y2 399 aaPredicted RBP17.33■□□□□ 0.36
NELFE-201ENST00000375425 PROCA1Q8NCQ7 364 aaPredicted RBP17.33■□□□□ 0.36
NELFE-201ENST00000375425 BCL11AQ9H165 835 aa17.33■□□□□ 0.36
NELFE-201ENST00000375425 CHMP4BQ9H444 224 aaKnown RBP17.33■□□□□ 0.36
NELFE-201ENST00000375425 AS3MTQ9HBK9 375 aa17.33■□□□□ 0.36
NELFE-201ENST00000375425 HLA-DOAP06340 250 aa17.32■□□□□ 0.36
NELFE-201ENST00000375425 ASNSP08243 561 aa17.32■□□□□ 0.36
NELFE-201ENST00000375425 GRK4P32298 578 aa17.32■□□□□ 0.36
NELFE-201ENST00000375425 USP5P45974 858 aa17.32■□□□□ 0.36
NELFE-201ENST00000375425 PRKCZQ05513 592 aa17.32■□□□□ 0.36
NELFE-201ENST00000375425 CERS3Q8IU89 383 aa17.32■□□□□ 0.36
NELFE-201ENST00000375425 PNMA3Q9UL41 463 aa17.32■□□□□ 0.36
NELFE-201ENST00000375425 ZSWIM8A7E2V4 1837 aa17.32■□□□□ 0.36
NELFE-201ENST00000375425 DOCK1Q14185 1865 aa17.32■□□□□ 0.36
NELFE-201ENST00000375425 RAB11FIP3O75154 756 aa17.31■□□□□ 0.36
NELFE-201ENST00000375425 IFIT2P09913 472 aaKnown RBP17.31■□□□□ 0.36
NELFE-201ENST00000375425 MTFR1Q15390 333 aa17.31■□□□□ 0.36
NELFE-201ENST00000375425 SH3D19Q5HYK7 790 aa17.31■□□□□ 0.36
NELFE-201ENST00000375425 TMED8Q6PL24 325 aaPredicted RBP17.31■□□□□ 0.36
NELFE-201ENST00000375425 ANKRD13CQ8N6S4 541 aa17.31■□□□□ 0.36
NELFE-201ENST00000375425 WDR18Q9BV38 432 aa17.31■□□□□ 0.36
NELFE-201ENST00000375425 GABRQQ9UN88 632 aa17.31■□□□□ 0.36
NELFE-201ENST00000375425 GDF11O95390 407 aa17.3■□□□□ 0.36
NELFE-201ENST00000375425 BACE1P56817 501 aa17.3■□□□□ 0.36
NELFE-201ENST00000375425 PABPC4Q13310 644 aaKnown RBP eCLIP17.3■□□□□ 0.362e-10■■■■□ 19.3
NELFE-201ENST00000375425 TTF1Q15361 905 aaPredicted RBP17.3■□□□□ 0.36
NELFE-201ENST00000375425 SHROOM1Q2M3G4 852 aaPredicted RBP17.3■□□□□ 0.36
NELFE-201ENST00000375425 C20orf194Q5TEA3 1177 aa17.3■□□□□ 0.36
NELFE-201ENST00000375425 PHIPQ8WWQ0 1821 aa17.3■□□□□ 0.36
NELFE-201ENST00000375425 MTMR2Q13614 643 aa17.3■□□□□ 0.36
NELFE-201ENST00000375425 SLC9C2Q5TAH2 1124 aa17.3■□□□□ 0.36
NELFE-201ENST00000375425 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.3■□□□□ 0.36
NELFE-201ENST00000375425 GINM1Q9NU53 330 aa17.3■□□□□ 0.36
NELFE-201ENST00000375425 BIN2Q9UBW5 565 aaPredicted RBP17.3■□□□□ 0.36
NELFE-201ENST00000375425 MYO5AQ9Y4I1 1855 aaKnown RBP17.29■□□□□ 0.36
NELFE-201ENST00000375425 GOLIM4O00461 696 aa17.29■□□□□ 0.36
NELFE-201ENST00000375425 TNPO2O14787 897 aaKnown RBP17.29■□□□□ 0.36
NELFE-201ENST00000375425 FLT3LGP49771 235 aa17.29■□□□□ 0.36
NELFE-201ENST00000375425 PDE3AQ14432 1141 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms