RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 SERPINB13Q9UIV8 391 aa18.55■□□□□ 0.56
PRPF38B-202ENST00000370022 FOXP2O15409 715 aa18.55■□□□□ 0.56
PRPF38B-202ENST00000370022 C12orf60Q5U649 245 aa18.55■□□□□ 0.56
PRPF38B-202ENST00000370022 CRACR2BQ8N4Y2 399 aaPredicted RBP18.55■□□□□ 0.56
PRPF38B-202ENST00000370022 IL25Q9H293 177 aa18.55■□□□□ 0.56
PRPF38B-202ENST00000370022 MYH1P12882 1939 aa18.54■□□□□ 0.56
PRPF38B-202ENST00000370022 USP2O75604 605 aaPredicted RBP18.54■□□□□ 0.56
PRPF38B-202ENST00000370022 HSPA6P17066 643 aa18.54■□□□□ 0.56
PRPF38B-202ENST00000370022 PLCD1P51178 756 aa18.54■□□□□ 0.56
PRPF38B-202ENST00000370022 KIAA1211Q6ZU35 1233 aa18.54■□□□□ 0.56
PRPF38B-202ENST00000370022 MIGA2Q7L4E1 593 aa18.54■□□□□ 0.56
PRPF38B-202ENST00000370022 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.54■□□□□ 0.56
PRPF38B-202ENST00000370022 ANGEL1Q9UNK9 670 aaKnown RBP18.54■□□□□ 0.56
PRPF38B-202ENST00000370022 FGAP02671 866 aa18.53■□□□□ 0.56
PRPF38B-202ENST00000370022 KLRG1Q96E93 195 aa18.53■□□□□ 0.56
PRPF38B-202ENST00000370022 SWAP70Q9UH65 585 aa18.53■□□□□ 0.56
PRPF38B-202ENST00000370022 ZNF112Q9UJU3 913 aa18.53■□□□□ 0.56
PRPF38B-202ENST00000370022 TLL2Q9Y6L7 1015 aa18.53■□□□□ 0.56
PRPF38B-202ENST00000370022 GABPAQ06546 454 aa18.52■□□□□ 0.56
PRPF38B-202ENST00000370022 PRKG1Q13976 671 aa18.52■□□□□ 0.56
PRPF38B-202ENST00000370022 SAPCD2Q86UD0 394 aa18.52■□□□□ 0.56
PRPF38B-202ENST00000370022 ANKRD13AQ8IZ07 590 aa18.52■□□□□ 0.56
PRPF38B-202ENST00000370022 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.52■□□□□ 0.56
PRPF38B-202ENST00000370022 CTNNA3Q9UI47 895 aa18.52■□□□□ 0.56
PRPF38B-202ENST00000370022 ROBO3Q96MS0 1386 aa18.52■□□□□ 0.56
PRPF38B-202ENST00000370022 MINDY4BA8MYZ0 360 aa18.51■□□□□ 0.55
PRPF38B-202ENST00000370022 SLC3A2P08195 630 aaKnown RBP18.51■□□□□ 0.55
PRPF38B-202ENST00000370022 SLC4A8Q2Y0W8 1093 aa18.51■□□□□ 0.55
PRPF38B-202ENST00000370022 LDLRAD1Q5T700 205 aa18.51■□□□□ 0.55
PRPF38B-202ENST00000370022 HHIPL1Q96JK4 782 aa18.51■□□□□ 0.55
PRPF38B-202ENST00000370022 WRNIP1Q96S55 665 aa18.51■□□□□ 0.55
PRPF38B-202ENST00000370022 ZNF287Q9HBT7 754 aa18.51■□□□□ 0.55
PRPF38B-202ENST00000370022 ABT1Q9ULW3 272 aaKnown RBP18.51■□□□□ 0.55
PRPF38B-202ENST00000370022 PHF20L1A8MW92 1017 aa18.51■□□□□ 0.55
PRPF38B-202ENST00000370022 EIF5BO60841 1220 aaKnown RBP18.51■□□□□ 0.55
PRPF38B-202ENST00000370022 CYP2D6P10635 497 aa18.51■□□□□ 0.55
PRPF38B-202ENST00000370022 HUNKP57058 714 aa18.51■□□□□ 0.55
PRPF38B-202ENST00000370022 MAP3K9P80192 1104 aa18.51■□□□□ 0.55
PRPF38B-202ENST00000370022 DNAJC18Q9H819 358 aa18.51■□□□□ 0.55
PRPF38B-202ENST00000370022 ANAPC4Q9UJX5 808 aa18.51■□□□□ 0.55
PRPF38B-202ENST00000370022 SIPA1L1O43166 1804 aa18.5■□□□□ 0.55
PRPF38B-202ENST00000370022 BAZ2AQ9UIF9 1905 aaKnown RBP18.5■□□□□ 0.55
PRPF38B-202ENST00000370022 PPARAQ07869 468 aa18.5■□□□□ 0.55
PRPF38B-202ENST00000370022 TATDN1Q6P1N9 297 aa18.5■□□□□ 0.55
PRPF38B-202ENST00000370022 C16orf86Q6ZW13 317 aa18.5■□□□□ 0.55
PRPF38B-202ENST00000370022 MOB2Q70IA6 237 aa18.5■□□□□ 0.55
PRPF38B-202ENST00000370022 FZD1Q9UP38 647 aa18.5■□□□□ 0.55
PRPF38B-202ENST00000370022 CSADQ9Y600 493 aa18.5■□□□□ 0.55
PRPF38B-202ENST00000370022 U3KPZ7 1027 aaPredicted RBP18.5■□□□□ 0.55
PRPF38B-202ENST00000370022 CYP2D7A0A087X1C5 515 aa18.49■□□□□ 0.55
PRPF38B-202ENST00000370022 UBE2Q2LH0YL09 131 aa18.49■□□□□ 0.55
PRPF38B-202ENST00000370022 CTNND1O60716 968 aaKnown RBP18.49■□□□□ 0.55
PRPF38B-202ENST00000370022 MAP4K1Q92918 833 aa18.49■□□□□ 0.55
PRPF38B-202ENST00000370022 ANO2Q9NQ90 1003 aa18.49■□□□□ 0.55
PRPF38B-202ENST00000370022 GINM1Q9NU53 330 aa18.49■□□□□ 0.55
PRPF38B-202ENST00000370022 FAM196BA6NMK8 535 aa18.48■□□□□ 0.55
PRPF38B-202ENST00000370022 ZNF213O14771 459 aa18.48■□□□□ 0.55
PRPF38B-202ENST00000370022 REC8O95072 547 aa18.48■□□□□ 0.55
PRPF38B-202ENST00000370022 NOL9Q5SY16 702 aaKnown RBP18.48■□□□□ 0.55
PRPF38B-202ENST00000370022 LSG1Q9H089 658 aaKnown RBP18.48■□□□□ 0.55
PRPF38B-202ENST00000370022 LAMB1P07942 1786 aa18.48■□□□□ 0.55
PRPF38B-202ENST00000370022 RASSF10A6NK89 507 aa18.47■□□□□ 0.55
PRPF38B-202ENST00000370022 PCP11498 1178 aaKnown RBP18.47■□□□□ 0.55
PRPF38B-202ENST00000370022 CAP2P40123 477 aa18.47■□□□□ 0.55
PRPF38B-202ENST00000370022 PTH1RQ03431 593 aa18.47■□□□□ 0.55
PRPF38B-202ENST00000370022 PDE4BQ07343 736 aa18.47■□□□□ 0.55
PRPF38B-202ENST00000370022 IMMTQ16891 758 aaKnown RBP18.47■□□□□ 0.55
PRPF38B-202ENST00000370022 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.47■□□□□ 0.55
PRPF38B-202ENST00000370022 DYNLL2Q96FJ2 89 aa18.47■□□□□ 0.55
PRPF38B-202ENST00000370022 EPB41L2O43491 1005 aaKnown RBP18.47■□□□□ 0.55
PRPF38B-202ENST00000370022 SLURP2P0DP57 97 aa18.47■□□□□ 0.55
PRPF38B-202ENST00000370022 INPP5BP32019 993 aa18.47■□□□□ 0.55
PRPF38B-202ENST00000370022 SHMT1P34896 483 aa18.47■□□□□ 0.55
PRPF38B-202ENST00000370022 CDK8P49336 464 aa18.47■□□□□ 0.55
PRPF38B-202ENST00000370022 EVX2Q03828 476 aa18.47■□□□□ 0.55
PRPF38B-202ENST00000370022 VGLL4Q14135 290 aa18.47■□□□□ 0.55
PRPF38B-202ENST00000370022 CERKLQ49MI3 558 aaPredicted RBP18.47■□□□□ 0.55
PRPF38B-202ENST00000370022 RGMBQ6NW40 437 aa18.47■□□□□ 0.55
PRPF38B-202ENST00000370022 SCYL3Q8IZE3 742 aa18.47■□□□□ 0.55
PRPF38B-202ENST00000370022 MKNK2Q9HBH9 465 aa18.47■□□□□ 0.55
PRPF38B-202ENST00000370022 NT5C2P49902 561 aa18.46■□□□□ 0.55
PRPF38B-202ENST00000370022 ZKSCAN4Q969J2 545 aaPredicted RBP18.46■□□□□ 0.55
PRPF38B-202ENST00000370022 SLC10A4Q96EP9 437 aa18.46■□□□□ 0.55
PRPF38B-202ENST00000370022 CCDC17Q96LX7 622 aa18.46■□□□□ 0.55
PRPF38B-202ENST00000370022 RNF41Q9H4P4 317 aaPredicted RBP18.46■□□□□ 0.55
PRPF38B-202ENST00000370022 ASNSP08243 561 aa18.45■□□□□ 0.54
PRPF38B-202ENST00000370022 DEFB115Q30KQ5 88 aa18.45■□□□□ 0.54
PRPF38B-202ENST00000370022 CCDC102AQ96A19 550 aa18.45■□□□□ 0.54
PRPF38B-202ENST00000370022 PICK1Q9NRD5 415 aa18.45■□□□□ 0.54
PRPF38B-202ENST00000370022 SNCAIPQ9Y6H5 919 aa18.45■□□□□ 0.54
PRPF38B-202ENST00000370022 SMIM22K7EJ46 135 aa18.44■□□□□ 0.54
PRPF38B-202ENST00000370022 FGRP09769 529 aa18.44■□□□□ 0.54
PRPF38B-202ENST00000370022 ZNF157P51786 506 aaPredicted RBP18.44■□□□□ 0.54
PRPF38B-202ENST00000370022 SLC44A5Q8NCS7 719 aa18.44■□□□□ 0.54
PRPF38B-202ENST00000370022 CLMNQ96JQ2 1002 aa18.44■□□□□ 0.54
PRPF38B-202ENST00000370022 TBC1D2Q9BYX2 928 aa18.44■□□□□ 0.54
PRPF38B-202ENST00000370022 CABP5Q9NP86 173 aa18.44■□□□□ 0.54
PRPF38B-202ENST00000370022 RBM8AQ9Y5S9 174 aaKnown RBP18.44■□□□□ 0.54
PRPF38B-202ENST00000370022 SPDYE5A6NIY4 337 aa18.43■□□□□ 0.54
PRPF38B-202ENST00000370022 HAND2P61296 217 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms