RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 IFIT3O14879 490 aaKnown RBP11.58□□□□□ -0.56
PTPRA-203ENST00000356147 CUTAO60888 179 aa11.58□□□□□ -0.56
PTPRA-203ENST00000356147 TUBB4AP04350 444 aa11.58□□□□□ -0.56
PTPRA-203ENST00000356147 TNNT3P45378 269 aaPredicted RBP11.58□□□□□ -0.56
PTPRA-203ENST00000356147 MDM2Q00987 491 aaPredicted RBP11.58□□□□□ -0.56
PTPRA-203ENST00000356147 CPLX2Q6PUV4 134 aaKnown RBP11.58□□□□□ -0.56
PTPRA-203ENST00000356147 IGSF22Q8N9C0 903 aa11.58□□□□□ -0.56
PTPRA-203ENST00000356147 NUP133Q8WUM0 1156 aa11.58□□□□□ -0.56
PTPRA-203ENST00000356147 RABGGTAQ92696 567 aa11.58□□□□□ -0.56
PTPRA-203ENST00000356147 ANKZF1Q9H8Y5 726 aa11.58□□□□□ -0.56
PTPRA-203ENST00000356147 ABCB6Q9NP58 842 aa11.58□□□□□ -0.56
PTPRA-203ENST00000356147 PIH1D3Q9NQM4 214 aaKnown RBP11.58□□□□□ -0.56
PTPRA-203ENST00000356147 RSPH14Q9UHP6 348 aa11.58□□□□□ -0.56
PTPRA-203ENST00000356147 WWC3Q9ULE0 1092 aa11.58□□□□□ -0.56
PTPRA-203ENST00000356147 TFR2Q9UP52 801 aa11.58□□□□□ -0.56
PTPRA-203ENST00000356147 FAN1Q9Y2M0 1017 aa11.58□□□□□ -0.56
PTPRA-203ENST00000356147 NWD2Q9ULI1 1742 aa11.57□□□□□ -0.56
PTPRA-203ENST00000356147 TPM1P09493 284 aa11.57□□□□□ -0.56
PTPRA-203ENST00000356147 CCDC175P0C221 793 aa11.57□□□□□ -0.56
PTPRA-203ENST00000356147 NTRK3Q16288 839 aa11.57□□□□□ -0.56
PTPRA-203ENST00000356147 METTL24Q5JXM2 366 aa11.57□□□□□ -0.56
PTPRA-203ENST00000356147 AKR1B15C9JRZ8 316 aaPredicted RBP11.57□□□□□ -0.56
PTPRA-203ENST00000356147 SMIM22K7EJ46 135 aa11.57□□□□□ -0.56
PTPRA-203ENST00000356147 MYO1CO00159 1063 aa11.57□□□□□ -0.56
PTPRA-203ENST00000356147 CD44P16070 742 aaKnown RBP11.57□□□□□ -0.56
PTPRA-203ENST00000356147 ZNF18P17022 549 aa11.57□□□□□ -0.56
PTPRA-203ENST00000356147 SLC35F6Q8N357 371 aa11.57□□□□□ -0.56
PTPRA-203ENST00000356147 RGS22Q8NE09 1264 aa11.57□□□□□ -0.56
PTPRA-203ENST00000356147 CCDC102AQ96A19 550 aa11.57□□□□□ -0.56
PTPRA-203ENST00000356147 CHMP4CQ96CF2 233 aa11.57□□□□□ -0.56
PTPRA-203ENST00000356147 EPSTI1Q96J88 318 aa11.57□□□□□ -0.56
PTPRA-203ENST00000356147 GPR108Q9NPR9 543 aa11.57□□□□□ -0.56
PTPRA-203ENST00000356147 ZSWIM5Q9P217 1185 aa11.57□□□□□ -0.56
PTPRA-203ENST00000356147 TRHP20396 242 aaPredicted RBP11.56□□□□□ -0.56
PTPRA-203ENST00000356147 CASP14P31944 242 aa11.56□□□□□ -0.56
PTPRA-203ENST00000356147 JAKMIP3Q5VZ66 844 aa11.56□□□□□ -0.56
PTPRA-203ENST00000356147 NOSTRINQ8IVI9 506 aa11.56□□□□□ -0.56
PTPRA-203ENST00000356147 DCAF5Q96JK2 942 aa11.56□□□□□ -0.56
PTPRA-203ENST00000356147 CSRNP2Q9H175 543 aa11.56□□□□□ -0.56
PTPRA-203ENST00000356147 CABP5Q9NP86 173 aa11.56□□□□□ -0.56
PTPRA-203ENST00000356147 ADGRG1Q9Y653 693 aa11.56□□□□□ -0.56
PTPRA-203ENST00000356147 SLC12A7Q9Y666 1083 aa11.56□□□□□ -0.56
PTPRA-203ENST00000356147 TACC3Q9Y6A5 838 aa11.56□□□□□ -0.56
PTPRA-203ENST00000356147 ZNF532Q9HCE3 1301 aa11.56□□□□□ -0.56
PTPRA-203ENST00000356147 ARHGAP23Q9P227 1491 aa11.56□□□□□ -0.56
PTPRA-203ENST00000356147 A0A087X0B3 334 aa11.56□□□□□ -0.56
PTPRA-203ENST00000356147 VSNL1P62760 191 aa11.56□□□□□ -0.56
PTPRA-203ENST00000356147 SSRP1Q08945 709 aaKnown RBP11.56□□□□□ -0.56
PTPRA-203ENST00000356147 PPFIBP1Q86W92 1011 aa11.56□□□□□ -0.56
PTPRA-203ENST00000356147 MAPK8IP1Q9UQF2 711 aa11.56□□□□□ -0.56
PTPRA-203ENST00000356147 CPDO75976 1380 aa11.56□□□□□ -0.56
PTPRA-203ENST00000356147 PRKAB2O43741 272 aa11.55□□□□□ -0.56
PTPRA-203ENST00000356147 FXR1P51114 621 aaKnown RBP eCLIP11.55□□□□□ -0.56
PTPRA-203ENST00000356147 NR1I3Q14994 352 aa11.55□□□□□ -0.56
PTPRA-203ENST00000356147 NCAPH2Q6IBW4 605 aa11.55□□□□□ -0.56
PTPRA-203ENST00000356147 SRGAP1Q7Z6B7 1085 aa11.55□□□□□ -0.56
PTPRA-203ENST00000356147 FCHSD1Q86WN1 690 aa11.55□□□□□ -0.56
PTPRA-203ENST00000356147 NOA1Q8NC60 698 aaKnown RBP11.55□□□□□ -0.56
PTPRA-203ENST00000356147 IGDCC4Q8TDY8 1250 aa11.55□□□□□ -0.56
PTPRA-203ENST00000356147 LY9Q9HBG7 655 aa11.55□□□□□ -0.56
PTPRA-203ENST00000356147 TRIM10Q9UDY6 481 aa11.55□□□□□ -0.56
PTPRA-203ENST00000356147 FBXO2Q9UK22 296 aaPredicted RBP11.55□□□□□ -0.56
PTPRA-203ENST00000356147 RGPD5Q99666 1765 aa11.55□□□□□ -0.56
PTPRA-203ENST00000356147 RNF225M0QZC1 329 aaPredicted RBP11.55□□□□□ -0.56
PTPRA-203ENST00000356147 KIF5CO60282 957 aa11.55□□□□□ -0.56
PTPRA-203ENST00000356147 CDKL5O76039 1030 aa11.55□□□□□ -0.56
PTPRA-203ENST00000356147 LDHAL6AQ6ZMR3 332 aa11.55□□□□□ -0.56
PTPRA-203ENST00000356147 NUTM2AQ8IVF1 878 aaPredicted RBP11.55□□□□□ -0.56
PTPRA-203ENST00000356147 FBXL16Q8N461 479 aa11.55□□□□□ -0.56
PTPRA-203ENST00000356147 AK7Q96M32 723 aa11.55□□□□□ -0.56
PTPRA-203ENST00000356147 PRDM1O75626 825 aa11.55□□□□□ -0.56
PTPRA-203ENST00000356147 ZMYND10O75800 440 aa11.55□□□□□ -0.56
PTPRA-203ENST00000356147 ZFYP08048 801 aaPredicted RBP11.55□□□□□ -0.56
PTPRA-203ENST00000356147 PHKA1P46020 1223 aa11.55□□□□□ -0.56
PTPRA-203ENST00000356147 DHX8Q14562 1220 aaKnown RBP11.55□□□□□ -0.56
PTPRA-203ENST00000356147 NOM1Q5C9Z4 860 aaKnown RBP11.55□□□□□ -0.56
PTPRA-203ENST00000356147 BEND6Q5SZJ8 279 aaPredicted RBP11.55□□□□□ -0.56
PTPRA-203ENST00000356147 VPS16Q9H269 839 aa11.55□□□□□ -0.56
PTPRA-203ENST00000356147 BLZF1Q9H2G9 400 aa11.55□□□□□ -0.56
PTPRA-203ENST00000356147 CCDC151A5D8V7 595 aa11.54□□□□□ -0.56
PTPRA-203ENST00000356147 WNT7AO00755 349 aa11.54□□□□□ -0.56
PTPRA-203ENST00000356147 ENC1O14682 589 aa11.54□□□□□ -0.56
PTPRA-203ENST00000356147 ADD2P35612 726 aa11.54□□□□□ -0.56
PTPRA-203ENST00000356147 IFIT5Q13325 482 aaKnown RBP11.54□□□□□ -0.56
PTPRA-203ENST00000356147 MORC3Q14149 939 aa11.54□□□□□ -0.56
PTPRA-203ENST00000356147 ENOX1Q8TC92 643 aaKnown RBP11.54□□□□□ -0.56
PTPRA-203ENST00000356147 EEF2KMTQ96G04 330 aa11.54□□□□□ -0.56
PTPRA-203ENST00000356147 RABEP2Q9H5N1 569 aa11.54□□□□□ -0.56
PTPRA-203ENST00000356147 ARMT1Q9H993 441 aa11.54□□□□□ -0.56
PTPRA-203ENST00000356147 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.54□□□□□ -0.56
PTPRA-203ENST00000356147 CNNM1Q9NRU3 951 aa11.54□□□□□ -0.56
PTPRA-203ENST00000356147 OVOS2A0A0G2JMS6 1433 aa11.54□□□□□ -0.56
PTPRA-203ENST00000356147 GOLGA6L9A6NEM1 432 aa11.54□□□□□ -0.56
PTPRA-203ENST00000356147 SAFBQ15424 915 aaKnown RBP eCLIP11.54□□□□□ -0.56
PTPRA-203ENST00000356147 EARS2Q5JPH6 523 aaKnown RBP11.54□□□□□ -0.56
PTPRA-203ENST00000356147 AIDAQ96BJ3 306 aa11.54□□□□□ -0.56
PTPRA-203ENST00000356147 SLF1Q9BQI6 1058 aa11.54□□□□□ -0.56
PTPRA-203ENST00000356147 DPYDQ12882 1025 aa11.53□□□□□ -0.56
PTPRA-203ENST00000356147 GPIHBP1Q8IV16 184 aa11.53□□□□□ -0.56
PTPRA-203ENST00000356147 MLKLQ8NB16 471 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms