RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 DENND2CQ68D51 928 aa5.6□□□□□ -1.51
SKP1-202ENST00000353411 ARHGAP22Q7Z5H3 698 aa5.6□□□□□ -1.51
SKP1-202ENST00000353411 ST7Q9NRC1 585 aa5.6□□□□□ -1.51
SKP1-202ENST00000353411 ASXL2Q76L83 1435 aa5.6□□□□□ -1.51
SKP1-202ENST00000353411 MAP3K7O43318 606 aa5.6□□□□□ -1.51
SKP1-202ENST00000353411 TADA3O75528 432 aa5.6□□□□□ -1.51
SKP1-202ENST00000353411 MTX1Q13505 466 aa5.6□□□□□ -1.51
SKP1-202ENST00000353411 PKP1Q13835 747 aa5.6□□□□□ -1.51
SKP1-202ENST00000353411 SREK1Q8WXA9 508 aaKnown RBP5.6□□□□□ -1.51
SKP1-202ENST00000353411 NOX5Q96PH1 765 aa5.6□□□□□ -1.51
SKP1-202ENST00000353411 SPG7Q9UQ90 795 aa5.6□□□□□ -1.51
SKP1-202ENST00000353411 CEP170Q5SW79 1584 aa5.6□□□□□ -1.51
SKP1-202ENST00000353411 MYH11P35749 1972 aa5.6□□□□□ -1.51
SKP1-202ENST00000353411 TLDC2A0PJX2 215 aa5.6□□□□□ -1.51
SKP1-202ENST00000353411 ATP2A1O14983 1001 aa5.6□□□□□ -1.51
SKP1-202ENST00000353411 AMPD3Q01432 767 aa5.6□□□□□ -1.51
SKP1-202ENST00000353411 SEMA3FQ13275 785 aa5.6□□□□□ -1.51
SKP1-202ENST00000353411 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.6□□□□□ -1.51
SKP1-202ENST00000353411 LARP1Q6PKG0 1096 aaKnown RBP5.6□□□□□ -1.51
SKP1-202ENST00000353411 MAP7D3Q8IWC1 876 aa5.6□□□□□ -1.51
SKP1-202ENST00000353411 NECAB1Q8N987 351 aa5.6□□□□□ -1.51
SKP1-202ENST00000353411 IL1RAPL2Q9NP60 686 aa5.6□□□□□ -1.51
SKP1-202ENST00000353411 RAPGEF6Q8TEU7 1601 aa5.59□□□□□ -1.51
SKP1-202ENST00000353411 PRPF4BQ13523 1007 aaKnown RBP5.59□□□□□ -1.51
SKP1-202ENST00000353411 JARID2Q92833 1246 aaPredicted RBP5.59□□□□□ -1.51
SKP1-202ENST00000353411 TUBB6Q9BUF5 446 aa5.59□□□□□ -1.51
SKP1-202ENST00000353411 KIAA1468Q9P260 1216 aa5.59□□□□□ -1.51
SKP1-202ENST00000353411 AOX1Q06278 1338 aa5.59□□□□□ -1.51
SKP1-202ENST00000353411 LRRIQ3A6PVS8 624 aaPredicted RBP5.59□□□□□ -1.51
SKP1-202ENST00000353411 ANKRD65E5RJM6 399 aa5.59□□□□□ -1.51
SKP1-202ENST00000353411 PECAM1P16284 738 aaPredicted RBP5.59□□□□□ -1.51
SKP1-202ENST00000353411 TCP1P17987 556 aaKnown RBP5.59□□□□□ -1.51
SKP1-202ENST00000353411 AMPHP49418 695 aa5.59□□□□□ -1.51
SKP1-202ENST00000353411 PACS2Q86VP3 889 aa5.59□□□□□ -1.51
SKP1-202ENST00000353411 HNRNPLLQ8WVV9 542 aaKnown RBP5.59□□□□□ -1.51
SKP1-202ENST00000353411 PAPOLBQ9NRJ5 636 aaKnown RBP5.59□□□□□ -1.51
SKP1-202ENST00000353411 STOML1Q9UBI4 398 aa5.59□□□□□ -1.51
SKP1-202ENST00000353411 PARP2Q9UGN5 583 aa5.59□□□□□ -1.51
SKP1-202ENST00000353411 SMIM23A6NLE4 172 aa5.59□□□□□ -1.51
SKP1-202ENST00000353411 H2AFXP16104 143 aaPredicted RBP5.59□□□□□ -1.51
SKP1-202ENST00000353411 YY1P25490 414 aa5.59□□□□□ -1.51
SKP1-202ENST00000353411 SMTNP53814 917 aa5.59□□□□□ -1.51
SKP1-202ENST00000353411 NNTQ13423 1086 aa5.59□□□□□ -1.51
SKP1-202ENST00000353411 SLC44A4Q53GD3 710 aa5.59□□□□□ -1.51
SKP1-202ENST00000353411 UBA5Q9GZZ9 404 aa5.59□□□□□ -1.51
SKP1-202ENST00000353411 KDM5DQ9BY66 1539 aa5.59□□□□□ -1.51
SKP1-202ENST00000353411 CCDC169A6NNP5 214 aa5.59□□□□□ -1.51
SKP1-202ENST00000353411 POLR3DP05423 398 aaPredicted RBP5.59□□□□□ -1.51
SKP1-202ENST00000353411 KLC1Q07866 573 aa5.59□□□□□ -1.51
SKP1-202ENST00000353411 B4GALNT2Q8NHY0 566 aa5.59□□□□□ -1.51
SKP1-202ENST00000353411 TBC1D2BQ9UPU7 963 aa5.59□□□□□ -1.51
SKP1-202ENST00000353411 ARHGEF12Q9NZN5 1544 aa5.59□□□□□ -1.51
SKP1-202ENST00000353411 POLR3AO14802 1390 aaPredicted RBP5.59□□□□□ -1.51
SKP1-202ENST00000353411 PSMA7O14818 248 aa5.59□□□□□ -1.51
SKP1-202ENST00000353411 EIF3HO15372 352 aaKnown RBP eCLIP5.59□□□□□ -1.51
SKP1-202ENST00000353411 RGS16O15492 202 aaPredicted RBP5.59□□□□□ -1.51
SKP1-202ENST00000353411 CHMLP26374 656 aa5.59□□□□□ -1.51
SKP1-202ENST00000353411 GSDMBQ8TAX9 411 aa5.59□□□□□ -1.51
SKP1-202ENST00000353411 SYTL4Q96C24 671 aaPredicted RBP5.59□□□□□ -1.51
SKP1-202ENST00000353411 TRIM47Q96LD4 638 aa5.59□□□□□ -1.51
SKP1-202ENST00000353411 NEUROD6Q96NK8 337 aa5.59□□□□□ -1.51
SKP1-202ENST00000353411 LARP6Q9BRS8 491 aaKnown RBP5.59□□□□□ -1.51
SKP1-202ENST00000353411 RAB17Q9H0T7 212 aa5.59□□□□□ -1.51
SKP1-202ENST00000353411 ZC4H2Q9NQZ6 224 aa5.59□□□□□ -1.51
SKP1-202ENST00000353411 HOMER2Q9NSB8 354 aa5.59□□□□□ -1.51
SKP1-202ENST00000353411 ABCC10Q5T3U5 1492 aa5.59□□□□□ -1.51
SKP1-202ENST00000353411 FAM135BQ49AJ0 1406 aa5.59□□□□□ -1.51
SKP1-202ENST00000353411 NSD3Q9BZ95 1437 aa5.59□□□□□ -1.51
SKP1-202ENST00000353411 TMEM232C9JQI7 657 aa5.59□□□□□ -1.52
SKP1-202ENST00000353411 IKBKBO14920 756 aa5.59□□□□□ -1.52
SKP1-202ENST00000353411 EIF2S2P20042 333 aaKnown RBP5.59□□□□□ -1.52
SKP1-202ENST00000353411 GUCY1B3Q02153 619 aa5.59□□□□□ -1.52
SKP1-202ENST00000353411 CALCOCO2Q13137 446 aa5.59□□□□□ -1.52
SKP1-202ENST00000353411 TTC39AQ5SRH9 613 aa5.59□□□□□ -1.52
SKP1-202ENST00000353411 BICDL2A1A5D9 508 aa5.59□□□□□ -1.52
SKP1-202ENST00000353411 PRC1O43663 620 aa5.59□□□□□ -1.52
SKP1-202ENST00000353411 NR1I2O75469 434 aa5.59□□□□□ -1.52
SKP1-202ENST00000353411 CCND1P24385 295 aa5.59□□□□□ -1.52
SKP1-202ENST00000353411 TPP2P29144 1249 aaPredicted RBP5.59□□□□□ -1.52
SKP1-202ENST00000353411 MAML3Q96JK9 1138 aa5.59□□□□□ -1.52
SKP1-202ENST00000353411 SEPT11Q9NVA2 429 aaKnown RBP5.59□□□□□ -1.52
SKP1-202ENST00000353411 ANGPTL2Q9UKU9 493 aa5.59□□□□□ -1.52
SKP1-202ENST00000353411 CFAP43Q8NDM7 1665 aa5.58□□□□□ -1.52
SKP1-202ENST00000353411 GSTA2P09210 222 aa5.58□□□□□ -1.52
SKP1-202ENST00000353411 DEUP1Q05D60 604 aa5.58□□□□□ -1.52
SKP1-202ENST00000353411 EP400NLQ6ZTU2 488 aa5.58□□□□□ -1.52
SKP1-202ENST00000353411 LCA5Q86VQ0 697 aa5.58□□□□□ -1.52
SKP1-202ENST00000353411 CCDC13Q8IYE1 715 aa5.58□□□□□ -1.52
SKP1-202ENST00000353411 OSBPL5Q9H0X9 879 aaPredicted RBP5.58□□□□□ -1.52
SKP1-202ENST00000353411 TUBA8Q9NY65 449 aaPredicted RBP5.58□□□□□ -1.52
SKP1-202ENST00000353411 FHOD1Q9Y613 1164 aa5.58□□□□□ -1.52
SKP1-202ENST00000353411 A0A0G2JS52 829 aa5.58□□□□□ -1.52
SKP1-202ENST00000353411 KRT18P05783 430 aaKnown RBP5.58□□□□□ -1.52
SKP1-202ENST00000353411 APBB1IPQ7Z5R6 666 aaPredicted RBP5.58□□□□□ -1.52
SKP1-202ENST00000353411 MORC4Q8TE76 937 aa5.58□□□□□ -1.52
SKP1-202ENST00000353411 ECHDC1Q9NTX5 307 aa5.58□□□□□ -1.52
SKP1-202ENST00000353411 SLC52A1Q9NWF4 448 aa5.58□□□□□ -1.52
SKP1-202ENST00000353411 GOLGA8BA8MQT2 603 aa5.58□□□□□ -1.52
SKP1-202ENST00000353411 PHBP35232 272 aa5.58□□□□□ -1.52
SKP1-202ENST00000353411 CUL4AQ13619 759 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms