RNA–Protein interactions for RNA: ENST00000341460.5

SYDE2-202, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SYDE2, Length 5,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-202ENST00000341460 TMEM87AQ8NBN3 555 aa19.6■□□□□ 0.73
SYDE2-202ENST00000341460 SYNCQ9H7C4 482 aa19.6■□□□□ 0.73
SYDE2-202ENST00000341460 SLC9C2Q5TAH2 1124 aa19.59■□□□□ 0.73
SYDE2-202ENST00000341460 IFT88Q13099 833 aa19.59■□□□□ 0.73
SYDE2-202ENST00000341460 SLC39A6Q13433 755 aa19.59■□□□□ 0.73
SYDE2-202ENST00000341460 LRRC2Q9BYS8 371 aa19.59■□□□□ 0.73
SYDE2-202ENST00000341460 INF2Q27J81 1249 aa19.59■□□□□ 0.73
SYDE2-202ENST00000341460 Q6ZUG5 572 aa19.59■□□□□ 0.73
SYDE2-202ENST00000341460 TAF11Q15544 211 aa19.59■□□□□ 0.73
SYDE2-202ENST00000341460 ASIC1P78348 528 aa19.58■□□□□ 0.73
SYDE2-202ENST00000341460 UAP1Q16222 522 aaPredicted RBP19.58■□□□□ 0.73
SYDE2-202ENST00000341460 HEATR3Q7Z4Q2 680 aa19.58■□□□□ 0.73
SYDE2-202ENST00000341460 NOX5Q96PH1 765 aa19.58■□□□□ 0.73
SYDE2-202ENST00000341460 TROVE2P10155 538 aaKnown RBP eCLIP19.58■□□□□ 0.73
SYDE2-202ENST00000341460 EEF2P13639 858 aaKnown RBP19.58■□□□□ 0.73
SYDE2-202ENST00000341460 STX2P32856 288 aa19.58■□□□□ 0.73
SYDE2-202ENST00000341460 CFAP221Q4G0U5 840 aa19.58■□□□□ 0.72
SYDE2-202ENST00000341460 C8orf58Q8NAV2 365 aa19.58■□□□□ 0.72
SYDE2-202ENST00000341460 DDX41Q9UJV9 622 aaKnown RBP19.58■□□□□ 0.72
SYDE2-202ENST00000341460 AK2P54819 239 aa19.58■□□□□ 0.72
SYDE2-202ENST00000341460 ZNF804AQ7Z570 1209 aa19.58■□□□□ 0.72
SYDE2-202ENST00000341460 HOMER3Q9NSC5 361 aa19.58■□□□□ 0.72
SYDE2-202ENST00000341460 MCM7P33993 719 aa19.57■□□□□ 0.72
SYDE2-202ENST00000341460 ETF1P62495 437 aaKnown RBP19.57■□□□□ 0.72
SYDE2-202ENST00000341460 TSKSQ9UJT2 592 aa19.57■□□□□ 0.72
SYDE2-202ENST00000341460 ARMC2Q8NEN0 867 aa19.57■□□□□ 0.72
SYDE2-202ENST00000341460 IQSEC3Q9UPP2 1182 aaPredicted RBP19.57■□□□□ 0.72
SYDE2-202ENST00000341460 NIP7Q9Y221 180 aaKnown RBP eCLIP19.57■□□□□ 0.72
SYDE2-202ENST00000341460 GUCY2CP25092 1073 aa19.57■□□□□ 0.72
SYDE2-202ENST00000341460 APBA1Q02410 837 aa19.57■□□□□ 0.72
SYDE2-202ENST00000341460 PAG1Q9NWQ8 432 aa19.57■□□□□ 0.72
SYDE2-202ENST00000341460 SCINQ9Y6U3 715 aa19.57■□□□□ 0.72
SYDE2-202ENST00000341460 I3L4J1 428 aa19.57■□□□□ 0.72
SYDE2-202ENST00000341460 CHUKO15111 745 aa19.57■□□□□ 0.72
SYDE2-202ENST00000341460 RGS16O15492 202 aaPredicted RBP19.57■□□□□ 0.72
SYDE2-202ENST00000341460 GNAT2P19087 354 aa19.57■□□□□ 0.72
SYDE2-202ENST00000341460 CTNNA1P35221 906 aaKnown RBP19.57■□□□□ 0.72
SYDE2-202ENST00000341460 EIF4A2Q14240 407 aaKnown RBP19.57■□□□□ 0.72
SYDE2-202ENST00000341460 TEX2Q8IWB9 1127 aa19.57■□□□□ 0.72
SYDE2-202ENST00000341460 ACTR5Q9H9F9 607 aaPredicted RBP19.57■□□□□ 0.72
SYDE2-202ENST00000341460 DYNC1I2Q13409 638 aaKnown RBP19.56■□□□□ 0.72
SYDE2-202ENST00000341460 TCP11Q8WWU5 503 aa19.56■□□□□ 0.72
SYDE2-202ENST00000341460 TCEANC2Q96MN5 208 aa19.56■□□□□ 0.72
SYDE2-202ENST00000341460 NYXQ9GZU5 481 aa19.56■□□□□ 0.72
SYDE2-202ENST00000341460 SATB2Q9UPW6 733 aa19.56■□□□□ 0.72
SYDE2-202ENST00000341460 TTC41PQ6P2S7 1318 aa19.56■□□□□ 0.72
SYDE2-202ENST00000341460 CALM1P0DP23 149 aa19.56■□□□□ 0.72
SYDE2-202ENST00000341460 CALM2P0DP24 149 aa19.56■□□□□ 0.72
SYDE2-202ENST00000341460 CALM3P0DP25 149 aa19.56■□□□□ 0.72
SYDE2-202ENST00000341460 PHEXP78562 749 aa19.56■□□□□ 0.72
SYDE2-202ENST00000341460 FBXO41Q8TF61 875 aa19.56■□□□□ 0.72
SYDE2-202ENST00000341460 RABGGTAQ92696 567 aa19.56■□□□□ 0.72
SYDE2-202ENST00000341460 NCAPGQ9BPX3 1015 aa19.56■□□□□ 0.72
SYDE2-202ENST00000341460 UHRF1BP1LA0JNW5 1464 aa19.56■□□□□ 0.72
SYDE2-202ENST00000341460 GPATCH8Q9UKJ3 1502 aaKnown RBP19.56■□□□□ 0.72
SYDE2-202ENST00000341460 DENND2CQ68D51 928 aa19.56■□□□□ 0.72
SYDE2-202ENST00000341460 LINS1Q8NG48 757 aa19.56■□□□□ 0.72
SYDE2-202ENST00000341460 RNASE9P60153 205 aaKnown RBP19.56■□□□□ 0.72
SYDE2-202ENST00000341460 SLMAPQ14BN4 828 aa19.56■□□□□ 0.72
SYDE2-202ENST00000341460 BRAPQ7Z569 592 aa19.56■□□□□ 0.72
SYDE2-202ENST00000341460 ACSBG1Q96GR2 724 aa19.56■□□□□ 0.72
SYDE2-202ENST00000341460 TRIM31Q9BZY9 425 aa19.56■□□□□ 0.72
SYDE2-202ENST00000341460 CSRNP2Q9H175 543 aa19.56■□□□□ 0.72
SYDE2-202ENST00000341460 FAM169AQ9Y6X4 670 aa19.56■□□□□ 0.72
SYDE2-202ENST00000341460 CCT6AP40227 531 aaKnown RBP19.56■□□□□ 0.72
SYDE2-202ENST00000341460 TADA2BQ86TJ2 420 aa19.56■□□□□ 0.72
SYDE2-202ENST00000341460 OGFOD1Q8N543 542 aa19.56■□□□□ 0.72
SYDE2-202ENST00000341460 MAGEB6P1A0A0J9YX57 407 aa19.55■□□□□ 0.72
SYDE2-202ENST00000341460 NAPAP54920 295 aa19.55■□□□□ 0.72
SYDE2-202ENST00000341460 SAR1BQ9Y6B6 198 aa19.55■□□□□ 0.72
SYDE2-202ENST00000341460 KLHL7Q8IXQ5 586 aa19.55■□□□□ 0.72
SYDE2-202ENST00000341460 CFAP61Q8NHU2 1237 aa19.55■□□□□ 0.72
SYDE2-202ENST00000341460 TMEM63CQ9P1W3 806 aa19.55■□□□□ 0.72
SYDE2-202ENST00000341460 MRPS9P82933 396 aaKnown RBP19.55■□□□□ 0.72
SYDE2-202ENST00000341460 NMIQ13287 307 aaPredicted RBP19.55■□□□□ 0.72
SYDE2-202ENST00000341460 ARHGAP42A6NI28 874 aa19.54■□□□□ 0.72
SYDE2-202ENST00000341460 CCDC197Q8NCU1 140 aa19.54■□□□□ 0.72
SYDE2-202ENST00000341460 THOC2Q8NI27 1593 aaKnown RBP19.54■□□□□ 0.72
SYDE2-202ENST00000341460 USP6NLQ92738 828 aa19.54■□□□□ 0.72
SYDE2-202ENST00000341460 C6orf50Q9HD87 102 aa19.54■□□□□ 0.72
SYDE2-202ENST00000341460 NUP160Q12769 1436 aa19.54■□□□□ 0.72
SYDE2-202ENST00000341460 F8W031 263 aaPredicted RBP19.54■□□□□ 0.72
SYDE2-202ENST00000341460 A0A1B0GVL5 298 aa19.54■□□□□ 0.72
SYDE2-202ENST00000341460 SKIP12755 728 aa19.54■□□□□ 0.72
SYDE2-202ENST00000341460 ERCC5P28715 1186 aaPredicted RBP19.54■□□□□ 0.72
SYDE2-202ENST00000341460 RTL9Q8NET4 1388 aa19.54■□□□□ 0.72
SYDE2-202ENST00000341460 FBXO18Q8NFZ0 1043 aa19.54■□□□□ 0.72
SYDE2-202ENST00000341460 MGARPQ8TDB4 240 aa19.54■□□□□ 0.72
SYDE2-202ENST00000341460 TRIM75PA6NK02 468 aa19.53■□□□□ 0.72
SYDE2-202ENST00000341460 IRX1P78414 480 aaPredicted RBP19.53■□□□□ 0.72
SYDE2-202ENST00000341460 PICALMQ13492 652 aa19.53■□□□□ 0.72
SYDE2-202ENST00000341460 DDB1Q16531 1140 aa19.53■□□□□ 0.72
SYDE2-202ENST00000341460 LCA5Q86VQ0 697 aa19.53■□□□□ 0.72
SYDE2-202ENST00000341460 PLCH2O75038 1416 aa19.53■□□□□ 0.72
SYDE2-202ENST00000341460 MX2P20592 715 aa19.53■□□□□ 0.72
SYDE2-202ENST00000341460 IRX5P78411 483 aaPredicted RBP19.53■□□□□ 0.72
SYDE2-202ENST00000341460 MTHFSDQ2M296 383 aaKnown RBP19.53■□□□□ 0.72
SYDE2-202ENST00000341460 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.53■□□□□ 0.72
SYDE2-202ENST00000341460 HVCN1Q96D96 273 aa19.53■□□□□ 0.72
SYDE2-202ENST00000341460 RNF113AO15541 343 aaKnown RBP19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 223.4 ms