RNA–Protein interactions for RNA: ENST00000339998.10

MBD1-203, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-203ENST00000339998 SSRP1Q08945 709 aaKnown RBP17.97■□□□□ 0.47
MBD1-203ENST00000339998 ZNF804AQ7Z570 1209 aa17.97■□□□□ 0.47
MBD1-203ENST00000339998 FANCBQ8NB91 859 aa17.97■□□□□ 0.47
MBD1-203ENST00000339998 ZNF396Q96N95 335 aaPredicted RBP17.97■□□□□ 0.47
MBD1-203ENST00000339998 ANAPC4Q9UJX5 808 aa17.97■□□□□ 0.47
MBD1-203ENST00000339998 BTBD18B2RXH4 712 aa17.97■□□□□ 0.47
MBD1-203ENST00000339998 STK38Q15208 465 aa17.97■□□□□ 0.47
MBD1-203ENST00000339998 FSIP1Q8NA03 581 aa17.97■□□□□ 0.47
MBD1-203ENST00000339998 LINC00301Q8NCQ3 95 aa17.97■□□□□ 0.47
MBD1-203ENST00000339998 SHISA4Q96DD7 197 aa17.97■□□□□ 0.47
MBD1-203ENST00000339998 TIAM2Q8IVF5 1701 aa17.96■□□□□ 0.47
MBD1-203ENST00000339998 USP5P45974 858 aa17.96■□□□□ 0.47
MBD1-203ENST00000339998 GNL2Q13823 731 aaKnown RBP17.96■□□□□ 0.47
MBD1-203ENST00000339998 CPLX2Q6PUV4 134 aaKnown RBP17.96■□□□□ 0.47
MBD1-203ENST00000339998 ATP2B1P20020 1258 aa17.96■□□□□ 0.47
MBD1-203ENST00000339998 SNW1Q13573 536 aaKnown RBP17.96■□□□□ 0.47
MBD1-203ENST00000339998 IFIT1BQ5T764 474 aaKnown RBP17.96■□□□□ 0.47
MBD1-203ENST00000339998 PLCD1P51178 756 aa17.95■□□□□ 0.46
MBD1-203ENST00000339998 TYRO3Q06418 890 aa17.95■□□□□ 0.46
MBD1-203ENST00000339998 NR5A1Q13285 461 aa17.95■□□□□ 0.46
MBD1-203ENST00000339998 SF3A1Q15459 793 aaKnown RBP17.95■□□□□ 0.46
MBD1-203ENST00000339998 MFSD14BQ5SR56 506 aa17.95■□□□□ 0.46
MBD1-203ENST00000339998 NBPF11Q86T75 865 aa17.95■□□□□ 0.46
MBD1-203ENST00000339998 FAM43AQ8N2R8 423 aa17.95■□□□□ 0.46
MBD1-203ENST00000339998 MRVI1Q9Y6F6 885 aa17.95■□□□□ 0.46
MBD1-203ENST00000339998 CDKL5O76039 1030 aa17.95■□□□□ 0.46
MBD1-203ENST00000339998 VEGFAP15692 232 aaPredicted RBP17.95■□□□□ 0.46
MBD1-203ENST00000339998 DOK7Q18PE1 504 aa17.95■□□□□ 0.46
MBD1-203ENST00000339998 LUZP1Q86V48 1076 aa17.95■□□□□ 0.46
MBD1-203ENST00000339998 WDR66Q8TBY9 1149 aa17.95■□□□□ 0.46
MBD1-203ENST00000339998 OXER1Q8TDS5 423 aa17.95■□□□□ 0.46
MBD1-203ENST00000339998 AKT1S1Q96B36 256 aa17.95■□□□□ 0.46
MBD1-203ENST00000339998 CLSTN2Q9H4D0 955 aa17.95■□□□□ 0.46
MBD1-203ENST00000339998 IFNAR1P17181 557 aa17.94■□□□□ 0.46
MBD1-203ENST00000339998 GTF2IP78347 998 aa17.94■□□□□ 0.46
MBD1-203ENST00000339998 PDLIM2Q96JY6 352 aa17.94■□□□□ 0.46
MBD1-203ENST00000339998 ECM29Q5VYK3 1845 aa17.94■□□□□ 0.46
MBD1-203ENST00000339998 ESPNB1AK53 854 aa17.94■□□□□ 0.46
MBD1-203ENST00000339998 WDHD1O75717 1129 aaPredicted RBP17.94■□□□□ 0.46
MBD1-203ENST00000339998 FMNL1O95466 1100 aaPredicted RBP17.94■□□□□ 0.46
MBD1-203ENST00000339998 RASGRP2Q7LDG7 609 aa17.94■□□□□ 0.46
MBD1-203ENST00000339998 CRACR2BQ8N4Y2 399 aaPredicted RBP17.94■□□□□ 0.46
MBD1-203ENST00000339998 RTEL1Q9NZ71 1219 aa17.94■□□□□ 0.46
MBD1-203ENST00000339998 NDUFA8P51970 172 aa17.94■□□□□ 0.46
MBD1-203ENST00000339998 ANO6Q4KMQ2 910 aa17.94■□□□□ 0.46
MBD1-203ENST00000339998 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.94■□□□□ 0.46
MBD1-203ENST00000339998 CCDC88AQ3V6T2 1871 aa17.93■□□□□ 0.46
MBD1-203ENST00000339998 DUOX1Q9NRD9 1551 aa17.93■□□□□ 0.46
MBD1-203ENST00000339998 FAM205CA6NFA0 338 aa17.93■□□□□ 0.46
MBD1-203ENST00000339998 PPEF1O14829 653 aaPredicted RBP17.93■□□□□ 0.46
MBD1-203ENST00000339998 LETM1O95202 739 aaPredicted RBP17.93■□□□□ 0.46
MBD1-203ENST00000339998 CLIC6Q96NY7 704 aa17.93■□□□□ 0.46
MBD1-203ENST00000339998 KCNQ5Q9NR82 932 aa17.93■□□□□ 0.46
MBD1-203ENST00000339998 VPS54Q9P1Q0 977 aa17.93■□□□□ 0.46
MBD1-203ENST00000339998 USP17L3A6NCW0 530 aa17.93■□□□□ 0.46
MBD1-203ENST00000339998 USP17L4A6NCW7 530 aa17.93■□□□□ 0.46
MBD1-203ENST00000339998 TSPY2A6NKD2 308 aa17.93■□□□□ 0.46
MBD1-203ENST00000339998 SPTLC2O15270 562 aa17.93■□□□□ 0.46
MBD1-203ENST00000339998 BBOX1O75936 387 aa17.93■□□□□ 0.46
MBD1-203ENST00000339998 CCDC192P0DO97 292 aa17.93■□□□□ 0.46
MBD1-203ENST00000339998 BTDP43251 543 aa17.93■□□□□ 0.46
MBD1-203ENST00000339998 SPECC1Q5M775 1068 aa17.93■□□□□ 0.46
MBD1-203ENST00000339998 ANO1Q5XXA6 986 aa17.93■□□□□ 0.46
MBD1-203ENST00000339998 USP17L1Q7RTZ2 530 aa17.93■□□□□ 0.46
MBD1-203ENST00000339998 DNAJC25Q9H1X3 360 aa17.93■□□□□ 0.46
MBD1-203ENST00000339998 SLURP2P0DP57 97 aa17.92■□□□□ 0.46
MBD1-203ENST00000339998 ATP2B4P23634 1241 aa17.92■□□□□ 0.46
MBD1-203ENST00000339998 HOXA10P31260 410 aaPredicted RBP17.92■□□□□ 0.46
MBD1-203ENST00000339998 PDS5AQ29RF7 1337 aaKnown RBP17.92■□□□□ 0.46
MBD1-203ENST00000339998 SPTY2D1Q68D10 685 aaPredicted RBP17.92■□□□□ 0.46
MBD1-203ENST00000339998 IQCA1Q86XH1 822 aa17.92■□□□□ 0.46
MBD1-203ENST00000339998 PDGFDQ9GZP0 370 aaPredicted RBP17.92■□□□□ 0.46
MBD1-203ENST00000339998 ATP8A2Q9NTI2 1148 aa17.92■□□□□ 0.46
MBD1-203ENST00000339998 DDX19AQ9NUU7 478 aaKnown RBP17.92■□□□□ 0.46
MBD1-203ENST00000339998 MKRN1Q9UHC7 482 aaKnown RBP17.92■□□□□ 0.46
MBD1-203ENST00000339998 V9GY48 417 aaPredicted RBP17.92■□□□□ 0.46
MBD1-203ENST00000339998 SRGNP10124 158 aa17.92■□□□□ 0.46
MBD1-203ENST00000339998 TROAPQ12815 778 aa17.92■□□□□ 0.46
MBD1-203ENST00000339998 NOM1Q5C9Z4 860 aaKnown RBP17.92■□□□□ 0.46
MBD1-203ENST00000339998 ENGASEQ8NFI3 743 aa17.92■□□□□ 0.46
MBD1-203ENST00000339998 ZNF622Q969S3 477 aaKnown RBP eCLIP17.92■□□□□ 0.465e-7■■■□□ 14.6
MBD1-203ENST00000339998 ZNF830Q96NB3 372 aaPredicted RBP17.92■□□□□ 0.46
MBD1-203ENST00000339998 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.92■□□□□ 0.46
MBD1-203ENST00000339998 RTFDC1Q9BY42 306 aaPredicted RBP17.92■□□□□ 0.46
MBD1-203ENST00000339998 TFAP4Q01664 338 aa17.91■□□□□ 0.46
MBD1-203ENST00000339998 TRIM29Q14134 588 aa17.91■□□□□ 0.46
MBD1-203ENST00000339998 DIS3L2Q8IYB7 885 aaKnown RBP17.91■□□□□ 0.46
MBD1-203ENST00000339998 ANO8Q9HCE9 1232 aaPredicted RBP17.91■□□□□ 0.46
MBD1-203ENST00000339998 ADCY5O95622 1261 aa17.91■□□□□ 0.46
MBD1-203ENST00000339998 MROH7-TTC4A0A0A0MT08 1334 aa17.91■□□□□ 0.46
MBD1-203ENST00000339998 ADAMTS3O15072 1205 aa17.91■□□□□ 0.46
MBD1-203ENST00000339998 ZNF772Q68DY9 489 aaPredicted RBP17.91■□□□□ 0.46
MBD1-203ENST00000339998 CCDC73Q6ZRK6 1079 aa17.91■□□□□ 0.46
MBD1-203ENST00000339998 BRAPQ7Z569 592 aa17.91■□□□□ 0.46
MBD1-203ENST00000339998 IL17RBQ9NRM6 502 aa17.91■□□□□ 0.46
MBD1-203ENST00000339998 ANKRD31Q8N7Z5 1873 aa17.9■□□□□ 0.46
MBD1-203ENST00000339998 FGRP09769 529 aa17.9■□□□□ 0.46
MBD1-203ENST00000339998 RXRBP28702 533 aa17.9■□□□□ 0.46
MBD1-203ENST00000339998 C12orf60Q5U649 245 aa17.9■□□□□ 0.46
MBD1-203ENST00000339998 TRIM22Q8IYM9 498 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms