RNA–Protein interactions for RNA: ENST00000338179.6

LBR-202, Transcript of lamin B receptor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LBR, Length 3,812 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LBR-202ENST00000338179 ANKS3Q6ZW76 656 aa4.5□□□□□ -1.69
LBR-202ENST00000338179 HDGFL2Q7Z4V5 671 aaPredicted RBP4.5□□□□□ -1.69
LBR-202ENST00000338179 VPS37DQ86XT2 251 aa4.5□□□□□ -1.69
LBR-202ENST00000338179 TMX3Q96JJ7 454 aa4.5□□□□□ -1.69
LBR-202ENST00000338179 DDX41Q9UJV9 622 aaKnown RBP4.5□□□□□ -1.69
LBR-202ENST00000338179 AKAP11Q9UKA4 1901 aa4.5□□□□□ -1.69
LBR-202ENST00000338179 ERBB3P21860 1342 aa4.5□□□□□ -1.69
LBR-202ENST00000338179 SALL1Q9NSC2 1324 aa4.5□□□□□ -1.69
LBR-202ENST00000338179 ST18O60284 1047 aa4.5□□□□□ -1.69
LBR-202ENST00000338179 BCAMP50895 628 aa4.5□□□□□ -1.69
LBR-202ENST00000338179 C4orf48Q5BLP8 95 aa4.5□□□□□ -1.69
LBR-202ENST00000338179 ZNF746Q6NUN9 644 aaPredicted RBP4.5□□□□□ -1.69
LBR-202ENST00000338179 CPLX3Q8WVH0 158 aa4.5□□□□□ -1.69
LBR-202ENST00000338179 ZFRQ96KR1 1074 aaKnown RBP4.5□□□□□ -1.69
LBR-202ENST00000338179 ZBED2Q9BTP6 218 aa4.5□□□□□ -1.69
LBR-202ENST00000338179 ZSWIM6Q9HCJ5 1215 aa4.5□□□□□ -1.69
LBR-202ENST00000338179 STIM2Q9P246 746 aa4.5□□□□□ -1.69
LBR-202ENST00000338179 RGPD5Q99666 1765 aa4.5□□□□□ -1.69
LBR-202ENST00000338179 NEDD4P46934 1319 aa4.5□□□□□ -1.69
LBR-202ENST00000338179 FAM86C2PA6NEL3 165 aa4.5□□□□□ -1.69
LBR-202ENST00000338179 TULP2O00295 520 aa4.5□□□□□ -1.69
LBR-202ENST00000338179 U2AF1L5P0DN76 240 aaPredicted RBP4.5□□□□□ -1.69
LBR-202ENST00000338179 USP5P45974 858 aa4.5□□□□□ -1.69
LBR-202ENST00000338179 UBE2HP62256 183 aa4.5□□□□□ -1.69
LBR-202ENST00000338179 U2AF1Q01081 240 aaKnown RBP eCLIP4.5□□□□□ -1.69
LBR-202ENST00000338179 GABPB1Q06547 395 aaPredicted RBP4.5□□□□□ -1.69
LBR-202ENST00000338179 ST3GAL1Q11201 340 aa4.5□□□□□ -1.69
LBR-202ENST00000338179 USP4Q13107 963 aa4.5□□□□□ -1.69
LBR-202ENST00000338179 DGKZQ13574 1117 aa4.5□□□□□ -1.69
LBR-202ENST00000338179 ATL3Q6DD88 541 aa4.5□□□□□ -1.69
LBR-202ENST00000338179 NYAP1Q6ZVC0 841 aa4.5□□□□□ -1.69
LBR-202ENST00000338179 BRINP3Q76B58 766 aa4.5□□□□□ -1.69
LBR-202ENST00000338179 ETFBKMTQ8IXQ9 262 aa4.5□□□□□ -1.69
LBR-202ENST00000338179 TDRD7Q8NHU6 1098 aaKnown RBP4.5□□□□□ -1.69
LBR-202ENST00000338179 SECISBP2LQ93073 1101 aaKnown RBP4.5□□□□□ -1.69
LBR-202ENST00000338179 PPT2Q9UMR5 302 aa4.5□□□□□ -1.69
LBR-202ENST00000338179 TMEM229AB2RXF0 380 aa4.49□□□□□ -1.69
LBR-202ENST00000338179 APLP1P51693 650 aa4.49□□□□□ -1.69
LBR-202ENST00000338179 LRRC41Q15345 812 aa4.49□□□□□ -1.69
LBR-202ENST00000338179 FAM98CQ17RN3 349 aaKnown RBP4.49□□□□□ -1.69
LBR-202ENST00000338179 CCDC183Q5T5S1 534 aa4.49□□□□□ -1.69
LBR-202ENST00000338179 VPS53Q5VIR6 699 aa4.49□□□□□ -1.69
LBR-202ENST00000338179 DMRTA1Q5VZB9 504 aa4.49□□□□□ -1.69
LBR-202ENST00000338179 NXPE4Q6UWF7 544 aa4.49□□□□□ -1.69
LBR-202ENST00000338179 ITPRIPQ8IWB1 547 aa4.49□□□□□ -1.69
LBR-202ENST00000338179 TTC16Q8NEE8 873 aa4.49□□□□□ -1.69
LBR-202ENST00000338179 BAP1Q92560 729 aa4.49□□□□□ -1.69
LBR-202ENST00000338179 ARHGEF10LQ9HCE6 1279 aa4.49□□□□□ -1.69
LBR-202ENST00000338179 MYH3P11055 1940 aa4.49□□□□□ -1.69
LBR-202ENST00000338179 WDR33Q9C0J8 1336 aaKnown RBP4.49□□□□□ -1.69
LBR-202ENST00000338179 ESYT3A0FGR9 886 aa4.49□□□□□ -1.69
LBR-202ENST00000338179 RIMBP2O15034 1052 aa4.49□□□□□ -1.69
LBR-202ENST00000338179 SGSM2O43147 1006 aa4.49□□□□□ -1.69
LBR-202ENST00000338179 DNAJC6O75061 913 aa4.49□□□□□ -1.69
LBR-202ENST00000338179 PTCD1O75127 700 aaKnown RBP4.49□□□□□ -1.69
LBR-202ENST00000338179 DSC3Q14574 896 aa4.49□□□□□ -1.69
LBR-202ENST00000338179 PTPRNQ16849 979 aa4.49□□□□□ -1.69
LBR-202ENST00000338179 PLEKHG6Q3KR16 790 aa4.49□□□□□ -1.69
LBR-202ENST00000338179 TKFCQ3LXA3 575 aa4.49□□□□□ -1.69
LBR-202ENST00000338179 CCDC93Q567U6 631 aa4.49□□□□□ -1.69
LBR-202ENST00000338179 HSP90AB2PQ58FF8 381 aa4.49□□□□□ -1.69
LBR-202ENST00000338179 SH3TC2Q8TF17 1288 aa4.49□□□□□ -1.69
LBR-202ENST00000338179 GPRASP2Q96D09 838 aa4.49□□□□□ -1.69
LBR-202ENST00000338179 SPON2Q9BUD6 331 aa4.49□□□□□ -1.69
LBR-202ENST00000338179 CFHR5Q9BXR6 569 aa4.49□□□□□ -1.69
LBR-202ENST00000338179 OSBPL7Q9BZF2 842 aa4.49□□□□□ -1.69
LBR-202ENST00000338179 KCNF1Q9H3M0 494 aa4.49□□□□□ -1.69
LBR-202ENST00000338179 L2HGDHQ9H9P8 463 aa4.49□□□□□ -1.69
LBR-202ENST00000338179 CUEDC1Q9NWM3 386 aaPredicted RBP4.49□□□□□ -1.69
LBR-202ENST00000338179 SNTG2Q9NY99 539 aa4.49□□□□□ -1.69
LBR-202ENST00000338179 NSFL1CQ9UNZ2 370 aaKnown RBP4.49□□□□□ -1.69
LBR-202ENST00000338179 TRAK1Q9UPV9 953 aa4.49□□□□□ -1.69
LBR-202ENST00000338179 RGPD3A6NKT7 1758 aaPredicted RBP4.49□□□□□ -1.69
LBR-202ENST00000338179 RGPD4Q7Z3J3 1758 aa4.49□□□□□ -1.69
LBR-202ENST00000338179 SLIT2O94813 1529 aa4.49□□□□□ -1.69
LBR-202ENST00000338179 CCDC194A0A1B0GVG4 234 aa4.49□□□□□ -1.69
LBR-202ENST00000338179 HOXB3P14651 431 aaPredicted RBP4.49□□□□□ -1.69
LBR-202ENST00000338179 PRKAR2BP31323 418 aa4.49□□□□□ -1.69
LBR-202ENST00000338179 DHX8Q14562 1220 aaKnown RBP4.49□□□□□ -1.69
LBR-202ENST00000338179 Q3C1V9 767 aa4.49□□□□□ -1.69
LBR-202ENST00000338179 PGBD3Q8N328 593 aa4.49□□□□□ -1.69
LBR-202ENST00000338179 PDCL2Q8N4E4 241 aa4.49□□□□□ -1.69
LBR-202ENST00000338179 IER2Q9BTL4 223 aa4.49□□□□□ -1.69
LBR-202ENST00000338179 NPHS2Q9NP85 383 aa4.49□□□□□ -1.69
LBR-202ENST00000338179 UBP1Q9NZI7 540 aa4.49□□□□□ -1.69
LBR-202ENST00000338179 FOXD3Q9UJU5 478 aaPredicted RBP4.49□□□□□ -1.69
LBR-202ENST00000338179 R3HCC1Q9Y3T6 440 aaKnown RBP4.49□□□□□ -1.69
LBR-202ENST00000338179 USP17L7P0C7H9 530 aa4.48□□□□□ -1.69
LBR-202ENST00000338179 ZAP70P43403 619 aa4.48□□□□□ -1.69
LBR-202ENST00000338179 PKP1Q13835 747 aa4.48□□□□□ -1.69
LBR-202ENST00000338179 NECTIN1Q15223 517 aa4.48□□□□□ -1.69
LBR-202ENST00000338179 PPP2R5EQ16537 467 aa4.48□□□□□ -1.69
LBR-202ENST00000338179 CC2D2BQ6DHV5 1058 aa4.48□□□□□ -1.69
LBR-202ENST00000338179 PDXDC2PQ6P474 469 aa4.48□□□□□ -1.69
LBR-202ENST00000338179 JAMLQ86YT9 394 aa4.48□□□□□ -1.69
LBR-202ENST00000338179 SLC9A9Q8IVB4 645 aa4.48□□□□□ -1.69
LBR-202ENST00000338179 RNPC3Q96LT9 517 aaKnown RBP4.48□□□□□ -1.69
LBR-202ENST00000338179 SPC25Q9HBM1 224 aa4.48□□□□□ -1.69
LBR-202ENST00000338179 MYCP01106 439 aaPredicted RBP4.48□□□□□ -1.69
LBR-202ENST00000338179 IGHA2P01877 340 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 1060.3 ms