RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 TAF1CQ15572 869 aaPredicted RBP33.47■■■□□ 2.95
ATPAF1-201ENST00000329231 ZFYVE28Q9HCC9 887 aa33.47■■■□□ 2.95
ATPAF1-201ENST00000329231 ZHX2Q9Y6X8 837 aa33.47■■■□□ 2.95
ATPAF1-201ENST00000329231 MAGEB6P1A0A0J9YX57 407 aa33.46■■■□□ 2.95
ATPAF1-201ENST00000329231 BTBD19C9JJ37 291 aa33.46■■■□□ 2.95
ATPAF1-201ENST00000329231 CXCL11O14625 94 aa33.46■■■□□ 2.95
ATPAF1-201ENST00000329231 FOXP4Q8IVH2 680 aaPredicted RBP33.46■■■□□ 2.95
ATPAF1-201ENST00000329231 RIOK1Q9BRS2 568 aaKnown RBP33.46■■■□□ 2.95
ATPAF1-201ENST00000329231 DDX24Q9GZR7 859 aaKnown RBP eCLIP33.46■■■□□ 2.95
ATPAF1-201ENST00000329231 PALD1Q9ULE6 856 aa33.46■■■□□ 2.95
ATPAF1-201ENST00000329231 ZNF532Q9HCE3 1301 aa33.46■■■□□ 2.95
ATPAF1-201ENST00000329231 HLA-DOAP06340 250 aa33.45■■■□□ 2.95
ATPAF1-201ENST00000329231 CRACR2BQ8N4Y2 399 aaPredicted RBP33.44■■■□□ 2.94
ATPAF1-201ENST00000329231 TRIM34Q9BYJ4 488 aa33.44■■■□□ 2.94
ATPAF1-201ENST00000329231 SAP30BPQ9UHR5 308 aaKnown RBP33.44■■■□□ 2.94
ATPAF1-201ENST00000329231 FOCADQ5VW36 1801 aa33.44■■■□□ 2.94
ATPAF1-201ENST00000329231 TCRBV5S4A2TA0A5A2 114 aa33.43■■■□□ 2.94
ATPAF1-201ENST00000329231 AFG3L2Q9Y4W6 797 aa33.43■■■□□ 2.94
ATPAF1-201ENST00000329231 CDK5RAP2Q96SN8 1893 aa33.43■■■□□ 2.94
ATPAF1-201ENST00000329231 CAP2P40123 477 aa33.42■■■□□ 2.94
ATPAF1-201ENST00000329231 PKN2Q16513 984 aaKnown RBP33.42■■■□□ 2.94
ATPAF1-201ENST00000329231 ANKRD23Q86SG2 305 aa33.42■■■□□ 2.94
ATPAF1-201ENST00000329231 METTL16Q86W50 562 aaKnown RBP33.42■■■□□ 2.94
ATPAF1-201ENST00000329231 ADD2P35612 726 aa33.41■■■□□ 2.94
ATPAF1-201ENST00000329231 CRNKL1Q9BZJ0 848 aaKnown RBP33.41■■■□□ 2.94
ATPAF1-201ENST00000329231 DOCK1Q14185 1865 aa33.41■■■□□ 2.94
ATPAF1-201ENST00000329231 HDAC1Q13547 482 aaPredicted RBP33.4■■■□□ 2.94
ATPAF1-201ENST00000329231 ZBTB47Q9UFB7 747 aaPredicted RBP33.4■■■□□ 2.94
ATPAF1-201ENST00000329231 SP3Q02447 781 aa33.39■■■□□ 2.94
ATPAF1-201ENST00000329231 ZSCAN25Q6NSZ9 544 aa33.39■■■□□ 2.94
ATPAF1-201ENST00000329231 FASTKD5Q7L8L6 764 aaKnown RBP33.39■■■□□ 2.94
ATPAF1-201ENST00000329231 ERO1AQ96HE7 468 aa33.39■■■□□ 2.94
ATPAF1-201ENST00000329231 A0A0G2JLL6 359 aaPredicted RBP33.38■■■□□ 2.93
ATPAF1-201ENST00000329231 MOGSQ13724 837 aa33.38■■■□□ 2.93
ATPAF1-201ENST00000329231 PRRT2Q7Z6L0 340 aaPredicted RBP33.38■■■□□ 2.93
ATPAF1-201ENST00000329231 TTC6Q86TZ1 520 aa33.38■■■□□ 2.93
ATPAF1-201ENST00000329231 TBC1D2Q9BYX2 928 aa33.38■■■□□ 2.93
ATPAF1-201ENST00000329231 PDHXO00330 501 aa33.37■■■□□ 2.93
ATPAF1-201ENST00000329231 RRP1BQ14684 758 aaKnown RBP33.37■■■□□ 2.93
ATPAF1-201ENST00000329231 UBE3CQ15386 1083 aa33.37■■■□□ 2.93
ATPAF1-201ENST00000329231 SLC4A8Q2Y0W8 1093 aa33.37■■■□□ 2.93
ATPAF1-201ENST00000329231 GCC1Q96CN9 775 aa33.37■■■□□ 2.93
ATPAF1-201ENST00000329231 DNAJC18Q9H819 358 aa33.37■■■□□ 2.93
ATPAF1-201ENST00000329231 FRMD4AQ9P2Q2 1039 aaPredicted RBP33.37■■■□□ 2.93
ATPAF1-201ENST00000329231 TTC41PQ6P2S7 1318 aa33.36■■■□□ 2.93
ATPAF1-201ENST00000329231 TRIM75PA6NK02 468 aa33.36■■■□□ 2.93
ATPAF1-201ENST00000329231 TLR2O60603 784 aa33.36■■■□□ 2.93
ATPAF1-201ENST00000329231 TSHZ3Q63HK5 1081 aa33.36■■■□□ 2.93
ATPAF1-201ENST00000329231 SIPA1L1O43166 1804 aa33.35■■■□□ 2.93
ATPAF1-201ENST00000329231 CCDC85CA6NKD9 419 aa33.35■■■□□ 2.93
ATPAF1-201ENST00000329231 CCDC84Q86UT8 332 aaPredicted RBP33.35■■■□□ 2.93
ATPAF1-201ENST00000329231 LCORLQ8N3X6 602 aa33.35■■■□□ 2.93
ATPAF1-201ENST00000329231 EHD4Q9H223 541 aa33.35■■■□□ 2.93
ATPAF1-201ENST00000329231 GINM1Q9NU53 330 aa33.35■■■□□ 2.93
ATPAF1-201ENST00000329231 SERPINB13Q9UIV8 391 aa33.35■■■□□ 2.93
ATPAF1-201ENST00000329231 USP17L5A8MUK1 530 aa33.34■■■□□ 2.93
ATPAF1-201ENST00000329231 ERC2O15083 957 aa33.34■■■□□ 2.93
ATPAF1-201ENST00000329231 ASNSP08243 561 aa33.34■■■□□ 2.93
ATPAF1-201ENST00000329231 MBD4O95243 580 aa33.33■■■□□ 2.93
ATPAF1-201ENST00000329231 POLR3DP05423 398 aaPredicted RBP33.33■■■□□ 2.93
ATPAF1-201ENST00000329231 SLFNL1Q499Z3 407 aa33.33■■■□□ 2.93
ATPAF1-201ENST00000329231 ANKRD45Q5TZF3 282 aa33.33■■■□□ 2.93
ATPAF1-201ENST00000329231 GPAT2Q6NUI2 795 aa33.33■■■□□ 2.93
ATPAF1-201ENST00000329231 GADL1Q6ZQY3 521 aa33.33■■■□□ 2.93
ATPAF1-201ENST00000329231 ZNF280CQ8ND82 737 aa33.33■■■□□ 2.93
ATPAF1-201ENST00000329231 CD99L2Q8TCZ2 262 aa33.33■■■□□ 2.93
ATPAF1-201ENST00000329231 ARMT1Q9H993 441 aa33.33■■■□□ 2.93
ATPAF1-201ENST00000329231 AS3MTQ9HBK9 375 aa33.33■■■□□ 2.93
ATPAF1-201ENST00000329231 SUPT16HQ9Y5B9 1047 aaKnown RBP33.33■■■□□ 2.93
ATPAF1-201ENST00000329231 MYH1P12882 1939 aa33.32■■■□□ 2.92
ATPAF1-201ENST00000329231 SPP2Q13103 211 aa33.32■■■□□ 2.92
ATPAF1-201ENST00000329231 KBTBD3Q8NAB2 608 aa33.32■■■□□ 2.92
ATPAF1-201ENST00000329231 TRIM17Q9Y577 477 aa33.32■■■□□ 2.92
ATPAF1-201ENST00000329231 ARHGEF6Q15052 776 aa33.31■■■□□ 2.92
ATPAF1-201ENST00000329231 FBXO46Q6PJ61 603 aaPredicted RBP33.31■■■□□ 2.92
ATPAF1-201ENST00000329231 SDR42E1Q8WUS8 393 aa33.31■■■□□ 2.92
ATPAF1-201ENST00000329231 PARK7Q99497 189 aaKnown RBP33.31■■■□□ 2.92
ATPAF1-201ENST00000329231 DCP1AQ9NPI6 582 aaPredicted RBP33.31■■■□□ 2.92
ATPAF1-201ENST00000329231 MCM9Q9NXL9 1143 aa33.31■■■□□ 2.92
ATPAF1-201ENST00000329231 PHIPQ8WWQ0 1821 aa33.3■■■□□ 2.92
ATPAF1-201ENST00000329231 GLRX3O76003 335 aaKnown RBP33.3■■■□□ 2.92
ATPAF1-201ENST00000329231 MX1P20591 662 aa33.3■■■□□ 2.92
ATPAF1-201ENST00000329231 OTOP1Q7RTM1 612 aa33.3■■■□□ 2.92
ATPAF1-201ENST00000329231 EXOC6Q8TAG9 804 aa33.3■■■□□ 2.92
ATPAF1-201ENST00000329231 OTUD7AQ8TE49 926 aaPredicted RBP33.3■■■□□ 2.92
ATPAF1-201ENST00000329231 RWDD1Q9H446 243 aaPredicted RBP33.3■■■□□ 2.92
ATPAF1-201ENST00000329231 SLC45A1Q9Y2W3 748 aa33.3■■■□□ 2.92
ATPAF1-201ENST00000329231 GDF11O95390 407 aa33.29■■■□□ 2.92
ATPAF1-201ENST00000329231 TATDN1Q6P1N9 297 aa33.29■■■□□ 2.92
ATPAF1-201ENST00000329231 EFCC1Q9HA90 598 aa33.29■■■□□ 2.92
ATPAF1-201ENST00000329231 ATP8A2Q9NTI2 1148 aa33.29■■■□□ 2.92
ATPAF1-201ENST00000329231 CHGBP05060 677 aa33.28■■■□□ 2.92
ATPAF1-201ENST00000329231 PLCD1P51178 756 aa33.28■■■□□ 2.92
ATPAF1-201ENST00000329231 PROCA1Q8NCQ7 364 aaPredicted RBP33.28■■■□□ 2.92
ATPAF1-201ENST00000329231 PI4K2BQ8TCG2 481 aa33.28■■■□□ 2.92
ATPAF1-201ENST00000329231 WDR18Q9BV38 432 aa33.28■■■□□ 2.92
ATPAF1-201ENST00000329231 ZBTB21Q9ULJ3 1066 aa33.28■■■□□ 2.92
ATPAF1-201ENST00000329231 HPS5Q9UPZ3 1129 aa33.28■■■□□ 2.92
ATPAF1-201ENST00000329231 ATAD5Q96QE3 1844 aa33.28■■■□□ 2.92
ATPAF1-201ENST00000329231 LRRFIP1Q32MZ4 808 aaKnown RBP33.27■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms