RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 SLC4A8Q2Y0W8 1093 aa8.79□□□□□ -1
IFT88-201ENST00000319980 ANO6Q4KMQ2 910 aa8.79□□□□□ -1
IFT88-201ENST00000319980 ADALQ6DHV7 355 aa8.79□□□□□ -1
IFT88-201ENST00000319980 RBM43Q6ZSC3 357 aaKnown RBP8.79□□□□□ -1
IFT88-201ENST00000319980 ZNF654Q8IZM8 581 aa8.79□□□□□ -1
IFT88-201ENST00000319980 FANCBQ8NB91 859 aa8.79□□□□□ -1
IFT88-201ENST00000319980 FAM200AQ8TCP9 573 aa8.79□□□□□ -1
IFT88-201ENST00000319980 KCNG4Q8TDN1 519 aa8.79□□□□□ -1
IFT88-201ENST00000319980 DCP1AQ9NPI6 582 aaPredicted RBP8.79□□□□□ -1
IFT88-201ENST00000319980 RNF216Q9NWF9 866 aaPredicted RBP8.79□□□□□ -1
IFT88-201ENST00000319980 DOCK2Q92608 1830 aa8.79□□□□□ -1
IFT88-201ENST00000319980 XDHP47989 1333 aa8.79□□□□□ -1
IFT88-201ENST00000319980 PDS5AQ29RF7 1337 aaKnown RBP8.79□□□□□ -1
IFT88-201ENST00000319980 CCDC196A0A1B0GTZ2 297 aa8.78□□□□□ -1
IFT88-201ENST00000319980 A0A1B0GVL5 298 aa8.78□□□□□ -1
IFT88-201ENST00000319980 FMNL1O95466 1100 aaPredicted RBP8.78□□□□□ -1
IFT88-201ENST00000319980 ST5P78524 1137 aa8.78□□□□□ -1
IFT88-201ENST00000319980 FAM160A1Q05DH4 1040 aa8.78□□□□□ -1
IFT88-201ENST00000319980 SF3B2Q13435 895 aaKnown RBP8.78□□□□□ -1
IFT88-201ENST00000319980 SLC27A3Q5K4L6 730 aa8.78□□□□□ -1
IFT88-201ENST00000319980 ANO1Q5XXA6 986 aa8.78□□□□□ -1
IFT88-201ENST00000319980 LUZP1Q86V48 1076 aa8.78□□□□□ -1
IFT88-201ENST00000319980 TRIM22Q8IYM9 498 aa8.78□□□□□ -1
IFT88-201ENST00000319980 ZSCAN10Q96SZ4 725 aaPredicted RBP8.78□□□□□ -1
IFT88-201ENST00000319980 MTA3Q9BTC8 594 aa8.78□□□□□ -1
IFT88-201ENST00000319980 NOL7Q9UMY1 257 aaKnown RBP8.78□□□□□ -1
IFT88-201ENST00000319980 C4BP0C0L5 1744 aa8.78□□□□□ -1
IFT88-201ENST00000319980 YEATS4O95619 227 aa8.78□□□□□ -1
IFT88-201ENST00000319980 SEC23AQ15436 765 aa8.78□□□□□ -1
IFT88-201ENST00000319980 SPTY2D1Q68D10 685 aaPredicted RBP8.78□□□□□ -1
IFT88-201ENST00000319980 IQCA1Q86XH1 822 aa8.78□□□□□ -1
IFT88-201ENST00000319980 ENAHQ8N8S7 591 aaPredicted RBP8.78□□□□□ -1
IFT88-201ENST00000319980 ENGASEQ8NFI3 743 aa8.78□□□□□ -1
IFT88-201ENST00000319980 CCDC39Q9UFE4 941 aa8.78□□□□□ -1
IFT88-201ENST00000319980 IRS2Q9Y4H2 1338 aa8.78□□□□□ -1
IFT88-201ENST00000319980 LDHBP07195 334 aaKnown RBP8.77□□□□□ -1
IFT88-201ENST00000319980 MARCKSP29966 332 aaPredicted RBP8.77□□□□□ -1
IFT88-201ENST00000319980 CRY2Q49AN0 593 aa8.77□□□□□ -1
IFT88-201ENST00000319980 IFIT1BQ5T764 474 aaKnown RBP8.77□□□□□ -1
IFT88-201ENST00000319980 CRACR2BQ8N4Y2 399 aaPredicted RBP8.77□□□□□ -1
IFT88-201ENST00000319980 WDR66Q8TBY9 1149 aa8.77□□□□□ -1
IFT88-201ENST00000319980 MRPS27Q92552 414 aaKnown RBP8.77□□□□□ -1
IFT88-201ENST00000319980 DNAJC25Q9H1X3 360 aa8.77□□□□□ -1
IFT88-201ENST00000319980 MCM9Q9NXL9 1143 aa8.77□□□□□ -1
IFT88-201ENST00000319980 UFL1O94874 794 aa8.77□□□□□ -1.01
IFT88-201ENST00000319980 ZNF165P49910 485 aa8.77□□□□□ -1.01
IFT88-201ENST00000319980 NDUFA8P51970 172 aa8.77□□□□□ -1.01
IFT88-201ENST00000319980 GPSM2P81274 684 aa8.77□□□□□ -1.01
IFT88-201ENST00000319980 DIXDC1Q155Q3 683 aa8.77□□□□□ -1.01
IFT88-201ENST00000319980 ZNF804AQ7Z570 1209 aa8.77□□□□□ -1.01
IFT88-201ENST00000319980 PROM2Q8N271 834 aa8.77□□□□□ -1.01
IFT88-201ENST00000319980 TDRD7Q8NHU6 1098 aaKnown RBP8.77□□□□□ -1.01
IFT88-201ENST00000319980 WASF1Q92558 559 aa8.77□□□□□ -1.01
IFT88-201ENST00000319980 ERCC4Q92889 916 aaPredicted RBP8.77□□□□□ -1.01
IFT88-201ENST00000319980 SDF4Q9BRK5 362 aa8.77□□□□□ -1.01
IFT88-201ENST00000319980 ATP8A2Q9NTI2 1148 aa8.77□□□□□ -1.01
IFT88-201ENST00000319980 KCNJ14Q9UNX9 436 aa8.77□□□□□ -1.01
IFT88-201ENST00000319980 STK36Q9NRP7 1315 aa8.77□□□□□ -1.01
IFT88-201ENST00000319980 BTBD18B2RXH4 712 aa8.77□□□□□ -1.01
IFT88-201ENST00000319980 CTAGE5O15320 804 aa8.77□□□□□ -1.01
IFT88-201ENST00000319980 AP5Z1O43299 807 aa8.77□□□□□ -1.01
IFT88-201ENST00000319980 CYP2D6P10635 497 aa8.77□□□□□ -1.01
IFT88-201ENST00000319980 U2AF2P26368 475 aaKnown RBP eCLIP8.77□□□□□ -1.019e-7■■■■□ 24.1
IFT88-201ENST00000319980 GRIK5Q16478 980 aa8.77□□□□□ -1.01
IFT88-201ENST00000319980 TXNRD1Q16881 649 aa8.77□□□□□ -1.01
IFT88-201ENST00000319980 FAM47AQ5JRC9 791 aa8.77□□□□□ -1.01
IFT88-201ENST00000319980 RGS22Q8NE09 1264 aa8.77□□□□□ -1.01
IFT88-201ENST00000319980 CBX8Q9HC52 389 aa8.77□□□□□ -1.01
IFT88-201ENST00000319980 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.77□□□□□ -1.01
IFT88-201ENST00000319980 CACNA1SQ13698 1873 aa8.76□□□□□ -1.01
IFT88-201ENST00000319980 A0A1W2PQ27 194 aa8.76□□□□□ -1.01
IFT88-201ENST00000319980 A0A1W2PQ64 194 aa8.76□□□□□ -1.01
IFT88-201ENST00000319980 A0A1W2PQD8 194 aa8.76□□□□□ -1.01
IFT88-201ENST00000319980 NMT2O60551 498 aa8.76□□□□□ -1.01
IFT88-201ENST00000319980 FGRP09769 529 aa8.76□□□□□ -1.01
IFT88-201ENST00000319980 DDR1Q08345 913 aa8.76□□□□□ -1.01
IFT88-201ENST00000319980 SLC39A14Q15043 492 aa8.76□□□□□ -1.01
IFT88-201ENST00000319980 CATIPQ7Z7H3 387 aa8.76□□□□□ -1.01
IFT88-201ENST00000319980 NBPF11Q86T75 865 aa8.76□□□□□ -1.01
IFT88-201ENST00000319980 FMR1NBQ8N0W7 255 aaPredicted RBP8.76□□□□□ -1.01
IFT88-201ENST00000319980 RBM17Q96I25 401 aaKnown RBP8.76□□□□□ -1.01
IFT88-201ENST00000319980 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.76□□□□□ -1.01
IFT88-201ENST00000319980 ZKSCAN5Q9Y2L8 839 aa8.76□□□□□ -1.01
IFT88-201ENST00000319980 A0A087WWV3 80 aa8.76□□□□□ -1.01
IFT88-201ENST00000319980 WDHD1O75717 1129 aaPredicted RBP8.76□□□□□ -1.01
IFT88-201ENST00000319980 DEXIO95424 95 aa8.76□□□□□ -1.01
IFT88-201ENST00000319980 USP17L8P0C7I0 530 aa8.76□□□□□ -1.01
IFT88-201ENST00000319980 PCP11498 1178 aaKnown RBP8.76□□□□□ -1.01
IFT88-201ENST00000319980 RCAN1P53805 252 aa8.76□□□□□ -1.01
IFT88-201ENST00000319980 SAFBQ15424 915 aaKnown RBP eCLIP8.76□□□□□ -1.01
IFT88-201ENST00000319980 DIS3L2Q8IYB7 885 aaKnown RBP8.76□□□□□ -1.01
IFT88-201ENST00000319980 ARPP21Q9UBL0 812 aaPredicted RBP8.76□□□□□ -1.01
IFT88-201ENST00000319980 GOLGB1Q14789 3259 aaKnown RBP8.75□□□□□ -1.01
IFT88-201ENST00000319980 hCG_1642624A0A1W2PR95 340 aa8.75□□□□□ -1.01
IFT88-201ENST00000319980 MMP1P03956 469 aa8.75□□□□□ -1.01
IFT88-201ENST00000319980 SLC3A2P08195 630 aaKnown RBP8.75□□□□□ -1.01
IFT88-201ENST00000319980 USP5P45974 858 aa8.75□□□□□ -1.01
IFT88-201ENST00000319980 AKAP17AQ02040 695 aaKnown RBP8.75□□□□□ -1.01
IFT88-201ENST00000319980 AXDND1Q5T1B0 1012 aaPredicted RBP8.75□□□□□ -1.01
IFT88-201ENST00000319980 NOSTRINQ8IVI9 506 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 159.5 ms