RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 MYL10Q9BUA6 226 aa21.87■■□□□ 1.09
RTN4-201ENST00000317610 SLC12A7Q9Y666 1083 aa21.87■■□□□ 1.09
RTN4-201ENST00000317610 ARAP2Q8WZ64 1704 aa21.87■■□□□ 1.09
RTN4-201ENST00000317610 PRR29P0C7W0 189 aa21.86■■□□□ 1.09
RTN4-201ENST00000317610 RILPL1Q5EBL4 403 aa21.86■■□□□ 1.09
RTN4-201ENST00000317610 KIF6Q6ZMV9 814 aa21.86■■□□□ 1.09
RTN4-201ENST00000317610 FOXP1Q9H334 677 aaPredicted RBP21.86■■□□□ 1.09
RTN4-201ENST00000317610 ZKSCAN7Q9P0L1 754 aaPredicted RBP21.86■■□□□ 1.09
RTN4-201ENST00000317610 TBC1D2BQ9UPU7 963 aa21.86■■□□□ 1.09
RTN4-201ENST00000317610 DOCK2Q92608 1830 aa21.86■■□□□ 1.09
RTN4-201ENST00000317610 BTBD18B2RXH4 712 aa21.86■■□□□ 1.09
RTN4-201ENST00000317610 NUTM2AQ8IVF1 878 aaPredicted RBP21.86■■□□□ 1.09
RTN4-201ENST00000317610 SPATA20Q8TB22 786 aa21.86■■□□□ 1.09
RTN4-201ENST00000317610 SMARCE1Q969G3 411 aa21.86■■□□□ 1.09
RTN4-201ENST00000317610 GREM2Q9H772 168 aa21.86■■□□□ 1.09
RTN4-201ENST00000317610 ZSWIM5Q9P217 1185 aa21.86■■□□□ 1.09
RTN4-201ENST00000317610 WWC3Q9ULE0 1092 aa21.86■■□□□ 1.09
RTN4-201ENST00000317610 TOGARAM1Q9Y4F4 1720 aa21.86■■□□□ 1.09
RTN4-201ENST00000317610 TBC1D8O95759 1140 aa21.85■■□□□ 1.09
RTN4-201ENST00000317610 GRIN1Q05586 938 aa21.85■■□□□ 1.09
RTN4-201ENST00000317610 PPP2R3AQ06190 1150 aa21.85■■□□□ 1.09
RTN4-201ENST00000317610 SAFBQ15424 915 aaKnown RBP eCLIP21.85■■□□□ 1.091e-6■■□□□ 14.5
RTN4-201ENST00000317610 CC2D1AQ6P1N0 951 aaPredicted RBP21.85■■□□□ 1.09
RTN4-201ENST00000317610 DIS3L2Q8IYB7 885 aaKnown RBP21.85■■□□□ 1.09
RTN4-201ENST00000317610 MED15Q96RN5 788 aa21.85■■□□□ 1.09
RTN4-201ENST00000317610 EPB41L4AQ9HCS5 686 aaPredicted RBP21.85■■□□□ 1.09
RTN4-201ENST00000317610 CALCOCO1Q9P1Z2 691 aa21.85■■□□□ 1.09
RTN4-201ENST00000317610 SERTAD1Q9UHV2 236 aa21.85■■□□□ 1.09
RTN4-201ENST00000317610 PATL2C9JE40 543 aaKnown RBP21.85■■□□□ 1.09
RTN4-201ENST00000317610 UQCRFS1P1P0C7P4 283 aa21.85■■□□□ 1.09
RTN4-201ENST00000317610 NR1I3Q14994 352 aa21.85■■□□□ 1.09
RTN4-201ENST00000317610 SPECC1Q5M775 1068 aa21.85■■□□□ 1.09
RTN4-201ENST00000317610 PDILTQ8N807 584 aa21.85■■□□□ 1.09
RTN4-201ENST00000317610 RAI14Q9P0K7 980 aa21.85■■□□□ 1.09
RTN4-201ENST00000317610 ANKRD18BA2A2Z9 1011 aa21.84■■□□□ 1.09
RTN4-201ENST00000317610 IFIT3O14879 490 aaKnown RBP21.84■■□□□ 1.09
RTN4-201ENST00000317610 POLR2DO15514 142 aaKnown RBP21.84■■□□□ 1.09
RTN4-201ENST00000317610 SEC31AO94979 1220 aaKnown RBP21.84■■□□□ 1.09
RTN4-201ENST00000317610 PDE8BO95263 885 aa21.84■■□□□ 1.09
RTN4-201ENST00000317610 GUCY1A2P33402 732 aa21.84■■□□□ 1.09
RTN4-201ENST00000317610 KANK3Q6NY19 840 aa21.84■■□□□ 1.09
RTN4-201ENST00000317610 IFNL3Q8IZI9 196 aa21.84■■□□□ 1.09
RTN4-201ENST00000317610 RABGGTAQ92696 567 aa21.84■■□□□ 1.09
RTN4-201ENST00000317610 AIDAQ96BJ3 306 aa21.84■■□□□ 1.09
RTN4-201ENST00000317610 CNNM2Q9H8M5 875 aa21.84■■□□□ 1.09
RTN4-201ENST00000317610 TACC3Q9Y6A5 838 aa21.84■■□□□ 1.09
RTN4-201ENST00000317610 A0A1B0GTH6 734 aa21.84■■□□□ 1.09
RTN4-201ENST00000317610 ACTN4O43707 911 aaKnown RBP21.84■■□□□ 1.09
RTN4-201ENST00000317610 CDK11BP21127 795 aaKnown RBP21.84■■□□□ 1.09
RTN4-201ENST00000317610 ERCC5P28715 1186 aaPredicted RBP21.84■■□□□ 1.09
RTN4-201ENST00000317610 ADKP55263 362 aaKnown RBP21.84■■□□□ 1.09
RTN4-201ENST00000317610 CTSWP56202 376 aa21.84■■□□□ 1.09
RTN4-201ENST00000317610 CT47A1Q5JQC4 288 aaPredicted RBP21.84■■□□□ 1.09
RTN4-201ENST00000317610 GIGYF2Q6Y7W6 1299 aaKnown RBP21.84■■□□□ 1.09
RTN4-201ENST00000317610 FAM177A1Q8N128 213 aaPredicted RBP21.84■■□□□ 1.09
RTN4-201ENST00000317610 CNNM1Q9NRU3 951 aa21.84■■□□□ 1.09
RTN4-201ENST00000317610 SRPRBQ9Y5M8 271 aaKnown RBP21.84■■□□□ 1.09
RTN4-201ENST00000317610 LRP5O75197 1615 aa21.84■■□□□ 1.09
RTN4-201ENST00000317610 ANKRD36CQ5JPF3 1778 aa21.83■■□□□ 1.09
RTN4-201ENST00000317610 ERICH4A6NGS2 130 aa21.83■■□□□ 1.09
RTN4-201ENST00000317610 SASH3O75995 380 aa21.83■■□□□ 1.09
RTN4-201ENST00000317610 PHKA1P46020 1223 aa21.83■■□□□ 1.09
RTN4-201ENST00000317610 PLCD1P51178 756 aa21.83■■□□□ 1.09
RTN4-201ENST00000317610 SYNE4Q8N205 404 aa21.83■■□□□ 1.09
RTN4-201ENST00000317610 PANX2Q96RD6 677 aa21.83■■□□□ 1.09
RTN4-201ENST00000317610 INCENPQ9NQS7 918 aa21.83■■□□□ 1.09
RTN4-201ENST00000317610 HSP90AA4PQ58FG1 418 aa21.83■■□□□ 1.08
RTN4-201ENST00000317610 NLRP10Q86W26 655 aa21.83■■□□□ 1.08
RTN4-201ENST00000317610 KRT23Q9C075 422 aa21.83■■□□□ 1.08
RTN4-201ENST00000317610 TEX35Q5T0J7 233 aa21.82■■□□□ 1.08
RTN4-201ENST00000317610 TOM1L2Q6ZVM7 507 aa21.82■■□□□ 1.08
RTN4-201ENST00000317610 TRMT44Q8IYL2 757 aaKnown RBP21.82■■□□□ 1.08
RTN4-201ENST00000317610 TRIM22Q8IYM9 498 aa21.82■■□□□ 1.08
RTN4-201ENST00000317610 TEX13AQ9BXU3 409 aaPredicted RBP21.82■■□□□ 1.08
RTN4-201ENST00000317610 TAOK2Q9UL54 1235 aa21.82■■□□□ 1.08
RTN4-201ENST00000317610 COL5A2P05997 1499 aaPredicted RBP21.81■■□□□ 1.08
RTN4-201ENST00000317610 AKNAD1Q5T1N1 836 aa21.81■■□□□ 1.08
RTN4-201ENST00000317610 MTA3Q9BTC8 594 aa21.81■■□□□ 1.08
RTN4-201ENST00000317610 NAPBQ9H115 298 aa21.81■■□□□ 1.08
RTN4-201ENST00000317610 SAMSN1Q9NSI8 373 aaKnown RBP21.81■■□□□ 1.08
RTN4-201ENST00000317610 KCNJ14Q9UNX9 436 aa21.81■■□□□ 1.08
RTN4-201ENST00000317610 RCAN1P53805 252 aa21.81■■□□□ 1.08
RTN4-201ENST00000317610 CTDSPL2Q05D32 466 aa21.81■■□□□ 1.08
RTN4-201ENST00000317610 RTN1Q16799 776 aa21.81■■□□□ 1.08
RTN4-201ENST00000317610 ZNF827Q17R98 1081 aa21.81■■□□□ 1.08
RTN4-201ENST00000317610 APTXQ7Z2E3 356 aaKnown RBP21.81■■□□□ 1.08
RTN4-201ENST00000317610 EPC1Q9H2F5 836 aa21.81■■□□□ 1.08
RTN4-201ENST00000317610 ZNF330Q9Y3S2 320 aaPredicted RBP21.81■■□□□ 1.08
RTN4-201ENST00000317610 PCDHB6Q9Y5E3 794 aa21.81■■□□□ 1.08
RTN4-201ENST00000317610 DEXIO95424 95 aa21.8■■□□□ 1.08
RTN4-201ENST00000317610 IL2RBP14784 551 aa21.8■■□□□ 1.08
RTN4-201ENST00000317610 GOLGA1Q92805 767 aa21.8■■□□□ 1.08
RTN4-201ENST00000317610 CEP131Q9UPN4 1083 aa21.8■■□□□ 1.08
RTN4-201ENST00000317610 FGFR2P21802 821 aa21.8■■□□□ 1.08
RTN4-201ENST00000317610 JAKMIP3Q5VZ66 844 aa21.8■■□□□ 1.08
RTN4-201ENST00000317610 STAG1Q8WVM7 1258 aa21.8■■□□□ 1.08
RTN4-201ENST00000317610 DHX58Q96C10 678 aa21.8■■□□□ 1.08
RTN4-201ENST00000317610 PARD6BQ9BYG5 372 aa21.8■■□□□ 1.08
RTN4-201ENST00000317610 MRPL44Q9H9J2 332 aaKnown RBP21.8■■□□□ 1.08
RTN4-201ENST00000317610 STRCP1A6NGW2 1772 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms