RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 STRBPQ96SI9 672 aaKnown RBP11.91□□□□□ -0.5
APOBEC3F-201ENST00000308521 ANKRD2Q9GZV1 360 aa11.91□□□□□ -0.5
APOBEC3F-201ENST00000308521 GPHNQ9NQX3 736 aaPredicted RBP11.91□□□□□ -0.5
APOBEC3F-201ENST00000308521 CYP7A1P22680 504 aa11.91□□□□□ -0.5
APOBEC3F-201ENST00000308521 PSEN1P49768 467 aa11.91□□□□□ -0.5
APOBEC3F-201ENST00000308521 SNW1Q13573 536 aaKnown RBP11.91□□□□□ -0.5
APOBEC3F-201ENST00000308521 NAA30Q147X3 362 aaPredicted RBP11.91□□□□□ -0.5
APOBEC3F-201ENST00000308521 DHX40Q8IX18 779 aaKnown RBP11.91□□□□□ -0.5
APOBEC3F-201ENST00000308521 CCAR2Q8N163 923 aaKnown RBP11.91□□□□□ -0.5
APOBEC3F-201ENST00000308521 NLGN1Q8N2Q7 840 aa11.91□□□□□ -0.5
APOBEC3F-201ENST00000308521 LCORLQ8N3X6 602 aa11.91□□□□□ -0.5
APOBEC3F-201ENST00000308521 ENGASEQ8NFI3 743 aa11.91□□□□□ -0.5
APOBEC3F-201ENST00000308521 IMPACTQ9P2X3 320 aa11.91□□□□□ -0.5
APOBEC3F-201ENST00000308521 FEZ2Q9UHY8 353 aaPredicted RBP11.91□□□□□ -0.5
APOBEC3F-201ENST00000308521 CCDC69A6NI79 296 aa11.9□□□□□ -0.5
APOBEC3F-201ENST00000308521 BECN2A8MW95 431 aa11.9□□□□□ -0.5
APOBEC3F-201ENST00000308521 HMGB1P09429 215 aaKnown RBP11.9□□□□□ -0.5
APOBEC3F-201ENST00000308521 DHX8Q14562 1220 aaKnown RBP11.9□□□□□ -0.5
APOBEC3F-201ENST00000308521 CRY2Q49AN0 593 aa11.9□□□□□ -0.5
APOBEC3F-201ENST00000308521 CCDC73Q6ZRK6 1079 aa11.9□□□□□ -0.5
APOBEC3F-201ENST00000308521 ZNF396Q96N95 335 aaPredicted RBP11.9□□□□□ -0.5
APOBEC3F-201ENST00000308521 USP27XA6NNY8 438 aa11.9□□□□□ -0.5
APOBEC3F-201ENST00000308521 ZNF213O14771 459 aa11.9□□□□□ -0.5
APOBEC3F-201ENST00000308521 FAM160A1Q05DH4 1040 aa11.9□□□□□ -0.5
APOBEC3F-201ENST00000308521 IMMTQ16891 758 aaKnown RBP11.9□□□□□ -0.5
APOBEC3F-201ENST00000308521 FBXO41Q8TF61 875 aa11.9□□□□□ -0.5
APOBEC3F-201ENST00000308521 ZNF384Q8TF68 577 aa11.9□□□□□ -0.5
APOBEC3F-201ENST00000308521 RBM17Q96I25 401 aaKnown RBP11.9□□□□□ -0.5
APOBEC3F-201ENST00000308521 OSBPL5Q9H0X9 879 aaPredicted RBP11.9□□□□□ -0.5
APOBEC3F-201ENST00000308521 ZNF215Q9UL58 517 aaPredicted RBP11.9□□□□□ -0.5
APOBEC3F-201ENST00000308521 SMIM22K7EJ46 135 aa11.89□□□□□ -0.51
APOBEC3F-201ENST00000308521 TUBB4AP04350 444 aa11.89□□□□□ -0.51
APOBEC3F-201ENST00000308521 PRDX5P30044 214 aa11.89□□□□□ -0.51
APOBEC3F-201ENST00000308521 SCRN1Q12765 414 aa11.89□□□□□ -0.51
APOBEC3F-201ENST00000308521 SDR42E1Q8WUS8 393 aa11.89□□□□□ -0.51
APOBEC3F-201ENST00000308521 ZNF592Q92610 1267 aa11.89□□□□□ -0.51
APOBEC3F-201ENST00000308521 NAT10Q9H0A0 1025 aaKnown RBP11.89□□□□□ -0.51
APOBEC3F-201ENST00000308521 GOLPH3LQ9H4A5 285 aa11.89□□□□□ -0.51
APOBEC3F-201ENST00000308521 BRMS1Q9HCU9 246 aa11.89□□□□□ -0.51
APOBEC3F-201ENST00000308521 KINO60870 393 aaKnown RBP11.89□□□□□ -0.51
APOBEC3F-201ENST00000308521 IGSF3O75054 1194 aa11.89□□□□□ -0.51
APOBEC3F-201ENST00000308521 UFL1O94874 794 aa11.89□□□□□ -0.51
APOBEC3F-201ENST00000308521 SLU7O95391 586 aaKnown RBP11.89□□□□□ -0.51
APOBEC3F-201ENST00000308521 KCNJ6P48051 423 aa11.89□□□□□ -0.51
APOBEC3F-201ENST00000308521 DYNLL1P63167 89 aaKnown RBP11.89□□□□□ -0.51
APOBEC3F-201ENST00000308521 APOBRQ0VD83 1088 aa11.89□□□□□ -0.51
APOBEC3F-201ENST00000308521 ARID5BQ14865 1188 aa11.89□□□□□ -0.51
APOBEC3F-201ENST00000308521 KMT5BQ4FZB7 885 aa11.89□□□□□ -0.51
APOBEC3F-201ENST00000308521 TICAM2Q86XR7 235 aa11.89□□□□□ -0.51
APOBEC3F-201ENST00000308521 RAB11FIP4Q86YS3 637 aa11.89□□□□□ -0.51
APOBEC3F-201ENST00000308521 CEP57L1Q8IYX8 460 aa11.89□□□□□ -0.51
APOBEC3F-201ENST00000308521 NSUN7Q8NE18 718 aaKnown RBP11.89□□□□□ -0.51
APOBEC3F-201ENST00000308521 CHMP4CQ96CF2 233 aa11.89□□□□□ -0.51
APOBEC3F-201ENST00000308521 EPB41L4AQ9HCS5 686 aaPredicted RBP11.89□□□□□ -0.51
APOBEC3F-201ENST00000308521 ZNF219Q9P2Y4 722 aaPredicted RBP11.89□□□□□ -0.51
APOBEC3F-201ENST00000308521 SLC4A4Q9Y6R1 1079 aa11.89□□□□□ -0.51
APOBEC3F-201ENST00000308521 MYH7P12883 1935 aa11.88□□□□□ -0.51
APOBEC3F-201ENST00000308521 CTDSPL2Q05D32 466 aa11.88□□□□□ -0.51
APOBEC3F-201ENST00000308521 DHX32Q7L7V1 743 aaKnown RBP11.88□□□□□ -0.51
APOBEC3F-201ENST00000308521 DDX11Q96FC9 970 aa11.88□□□□□ -0.51
APOBEC3F-201ENST00000308521 CAMKK2Q96RR4 588 aa11.88□□□□□ -0.51
APOBEC3F-201ENST00000308521 NBPF3Q9H094 633 aa11.88□□□□□ -0.51
APOBEC3F-201ENST00000308521 PARP3Q9Y6F1 533 aa11.88□□□□□ -0.51
APOBEC3F-201ENST00000308521 IFNL3Q8IZI9 196 aa11.88□□□□□ -0.51
APOBEC3F-201ENST00000308521 BPIFA3Q9BQP9 254 aa11.88□□□□□ -0.51
APOBEC3F-201ENST00000308521 AGXT2Q9BYV1 514 aa11.88□□□□□ -0.51
APOBEC3F-201ENST00000308521 POLLQ9UGP5 575 aa11.88□□□□□ -0.51
APOBEC3F-201ENST00000308521 XDHP47989 1333 aa11.87□□□□□ -0.51
APOBEC3F-201ENST00000308521 GSG1L2A8MUP6 293 aa11.87□□□□□ -0.51
APOBEC3F-201ENST00000308521 C6orf229H3BNL8 230 aa11.87□□□□□ -0.51
APOBEC3F-201ENST00000308521 RIMBP2O15034 1052 aa11.87□□□□□ -0.51
APOBEC3F-201ENST00000308521 CCT2P78371 535 aaKnown RBP11.87□□□□□ -0.51
APOBEC3F-201ENST00000308521 SLC15A2Q16348 729 aa11.87□□□□□ -0.51
APOBEC3F-201ENST00000308521 GRIK5Q16478 980 aa11.87□□□□□ -0.51
APOBEC3F-201ENST00000308521 MUM1L1Q5H9M0 696 aa11.87□□□□□ -0.51
APOBEC3F-201ENST00000308521 TBC1D10CQ8IV04 446 aa11.87□□□□□ -0.51
APOBEC3F-201ENST00000308521 L2HGDHQ9H9P8 463 aa11.87□□□□□ -0.51
APOBEC3F-201ENST00000308521 ARAP2Q8WZ64 1704 aa11.87□□□□□ -0.51
APOBEC3F-201ENST00000308521 PATL2C9JE40 543 aaKnown RBP11.87□□□□□ -0.51
APOBEC3F-201ENST00000308521 CYP2C19P33261 490 aa11.87□□□□□ -0.51
APOBEC3F-201ENST00000308521 MECOMQ03112 1051 aa11.87□□□□□ -0.51
APOBEC3F-201ENST00000308521 SLC4A8Q2Y0W8 1093 aa11.87□□□□□ -0.51
APOBEC3F-201ENST00000308521 NAPBQ9H115 298 aa11.87□□□□□ -0.51
APOBEC3F-201ENST00000308521 PSDA5PKW4 1024 aaPredicted RBP11.86□□□□□ -0.51
APOBEC3F-201ENST00000308521 CTDNEP1O95476 244 aa11.86□□□□□ -0.51
APOBEC3F-201ENST00000308521 EXOSC10Q01780 885 aaKnown RBP11.86□□□□□ -0.51
APOBEC3F-201ENST00000308521 CCDC150Q8NCX0 1101 aa11.86□□□□□ -0.51
APOBEC3F-201ENST00000308521 USP28Q96RU2 1077 aa11.86□□□□□ -0.51
APOBEC3F-201ENST00000308521 LAMA4Q16363 1823 aa11.86□□□□□ -0.51
APOBEC3F-201ENST00000308521 SALL1Q9NSC2 1324 aa11.86□□□□□ -0.51
APOBEC3F-201ENST00000308521 IRS2Q9Y4H2 1338 aa11.86□□□□□ -0.51
APOBEC3F-201ENST00000308521 A0A1W2PQ27 194 aa11.86□□□□□ -0.51
APOBEC3F-201ENST00000308521 A0A1W2PQ64 194 aa11.86□□□□□ -0.51
APOBEC3F-201ENST00000308521 A0A1W2PQD8 194 aa11.86□□□□□ -0.51
APOBEC3F-201ENST00000308521 PTPDC1A2A3K4 754 aa11.86□□□□□ -0.51
APOBEC3F-201ENST00000308521 SRGNP10124 158 aa11.86□□□□□ -0.51
APOBEC3F-201ENST00000308521 TNNT3P45378 269 aaPredicted RBP11.86□□□□□ -0.51
APOBEC3F-201ENST00000308521 TDO2P48775 406 aa11.86□□□□□ -0.51
APOBEC3F-201ENST00000308521 FILIP1Q7Z7B0 1213 aa11.86□□□□□ -0.51
APOBEC3F-201ENST00000308521 NBPF11Q86T75 865 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms