RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 MYL10Q9BUA6 226 aa12.08□□□□□ -0.48
SYNPO2-201ENST00000307142 CCDC113Q9H0I3 377 aa12.08□□□□□ -0.48
SYNPO2-201ENST00000307142 RNF181Q9P0P0 153 aa12.08□□□□□ -0.48
SYNPO2-201ENST00000307142 TRPC6Q9Y210 931 aa12.08□□□□□ -0.48
SYNPO2-201ENST00000307142 ACTN2P35609 894 aa12.08□□□□□ -0.48
SYNPO2-201ENST00000307142 BIRC3Q13489 604 aa12.08□□□□□ -0.48
SYNPO2-201ENST00000307142 R3HDM1Q15032 1099 aaKnown RBP12.08□□□□□ -0.48
SYNPO2-201ENST00000307142 GIGYF2Q6Y7W6 1299 aaKnown RBP12.08□□□□□ -0.48
SYNPO2-201ENST00000307142 TTC12Q9H892 705 aaPredicted RBP12.08□□□□□ -0.48
SYNPO2-201ENST00000307142 HEG1Q9ULI3 1381 aa12.08□□□□□ -0.48
SYNPO2-201ENST00000307142 PRAMEF22A3QJZ6 481 aa12.08□□□□□ -0.48
SYNPO2-201ENST00000307142 TMEM110-MUSTN1A8MSY1 372 aa12.08□□□□□ -0.48
SYNPO2-201ENST00000307142 PROSER3Q2NL68 480 aa12.08□□□□□ -0.48
SYNPO2-201ENST00000307142 GNPTABQ3T906 1256 aa12.08□□□□□ -0.48
SYNPO2-201ENST00000307142 GJC1P36383 396 aa12.08□□□□□ -0.48
SYNPO2-201ENST00000307142 ICA1Q05084 483 aa12.08□□□□□ -0.48
SYNPO2-201ENST00000307142 MRPS27Q92552 414 aaKnown RBP12.08□□□□□ -0.48
SYNPO2-201ENST00000307142 CLASP1Q7Z460 1538 aa12.08□□□□□ -0.48
SYNPO2-201ENST00000307142 KRT5P13647 590 aa12.08□□□□□ -0.48
SYNPO2-201ENST00000307142 C2orf69Q8N8R5 385 aa12.08□□□□□ -0.48
SYNPO2-201ENST00000307142 CROCC2H7BZ55 1655 aa12.07□□□□□ -0.48
SYNPO2-201ENST00000307142 OVOS2A0A0G2JMS6 1433 aa12.07□□□□□ -0.48
SYNPO2-201ENST00000307142 OVOS2A0A0J9YW53 1432 aa12.07□□□□□ -0.48
SYNPO2-201ENST00000307142 OVOS2Q6IE36 1432 aa12.07□□□□□ -0.48
SYNPO2-201ENST00000307142 ERLIN1O75477 346 aa12.07□□□□□ -0.48
SYNPO2-201ENST00000307142 KIF4BQ2VIQ3 1234 aa12.07□□□□□ -0.48
SYNPO2-201ENST00000307142 CPA1P15085 419 aa12.07□□□□□ -0.48
SYNPO2-201ENST00000307142 CCNA1P78396 465 aa12.07□□□□□ -0.48
SYNPO2-201ENST00000307142 CALCRLQ16602 461 aa12.07□□□□□ -0.48
SYNPO2-201ENST00000307142 RNF169Q8NCN4 708 aa12.07□□□□□ -0.48
SYNPO2-201ENST00000307142 AATKQ6ZMQ8 1374 aa12.07□□□□□ -0.48
SYNPO2-201ENST00000307142 TBC1D32Q96NH3 1257 aa12.07□□□□□ -0.48
SYNPO2-201ENST00000307142 SPON1Q9HCB6 807 aa12.07□□□□□ -0.48
SYNPO2-201ENST00000307142 hCG_1642624A0A1W2PR95 340 aa12.07□□□□□ -0.48
SYNPO2-201ENST00000307142 WDR44Q5JSH3 913 aa12.07□□□□□ -0.48
SYNPO2-201ENST00000307142 HACE1Q8IYU2 909 aa12.07□□□□□ -0.48
SYNPO2-201ENST00000307142 SPATA31A6Q5VVP1 1343 aa12.06□□□□□ -0.48
SYNPO2-201ENST00000307142 BICDL2A1A5D9 508 aa12.06□□□□□ -0.48
SYNPO2-201ENST00000307142 TRPC3Q13507 836 aa12.06□□□□□ -0.48
SYNPO2-201ENST00000307142 MSANTD4Q8NCY6 345 aa12.06□□□□□ -0.48
SYNPO2-201ENST00000307142 EEF2P13639 858 aaKnown RBP12.06□□□□□ -0.48
SYNPO2-201ENST00000307142 SLC8A3P57103 927 aa12.06□□□□□ -0.48
SYNPO2-201ENST00000307142 NACA2Q9H009 215 aa12.06□□□□□ -0.48
SYNPO2-201ENST00000307142 PAFAH1B1P43034 410 aa12.06□□□□□ -0.48
SYNPO2-201ENST00000307142 BMS1Q14692 1282 aaKnown RBP12.06□□□□□ -0.48
SYNPO2-201ENST00000307142 IFI16Q16666 785 aaKnown RBP12.06□□□□□ -0.48
SYNPO2-201ENST00000307142 IGSF1Q8N6C5 1336 aa12.06□□□□□ -0.48
SYNPO2-201ENST00000307142 DNM1Q05193 864 aaKnown RBP12.06□□□□□ -0.48
SYNPO2-201ENST00000307142 BRAPQ7Z569 592 aa12.06□□□□□ -0.48
SYNPO2-201ENST00000307142 OTUD6BQ8N6M0 293 aa12.06□□□□□ -0.48
SYNPO2-201ENST00000307142 OTUD7AQ8TE49 926 aaPredicted RBP12.06□□□□□ -0.48
SYNPO2-201ENST00000307142 UBE4AQ14139 1066 aa12.06□□□□□ -0.48
SYNPO2-201ENST00000307142 UTP14CQ5TAP6 766 aaKnown RBP12.06□□□□□ -0.48
SYNPO2-201ENST00000307142 MIGA2Q7L4E1 593 aa12.06□□□□□ -0.48
SYNPO2-201ENST00000307142 NLRP10Q86W26 655 aa12.06□□□□□ -0.48
SYNPO2-201ENST00000307142 IL27Q8NEV9 243 aa12.06□□□□□ -0.48
SYNPO2-201ENST00000307142 CTAGE1Q96RT6 745 aa12.06□□□□□ -0.48
SYNPO2-201ENST00000307142 CCPG1Q9ULG6 757 aa12.06□□□□□ -0.48
SYNPO2-201ENST00000307142 RPS6KA4O75676 772 aa12.06□□□□□ -0.48
SYNPO2-201ENST00000307142 GPR101Q96P66 508 aaPredicted RBP12.06□□□□□ -0.48
SYNPO2-201ENST00000307142 RNF17Q9BXT8 1623 aaKnown RBP12.06□□□□□ -0.48
SYNPO2-201ENST00000307142 FER1L4A9Z1Z3 1794 aa12.06□□□□□ -0.48
SYNPO2-201ENST00000307142 ERVV-1B6SEH8 477 aa12.05□□□□□ -0.48
SYNPO2-201ENST00000307142 SPICE1Q8N0Z3 855 aa12.05□□□□□ -0.48
SYNPO2-201ENST00000307142 MRPL11Q9Y3B7 192 aaKnown RBP12.05□□□□□ -0.48
SYNPO2-201ENST00000307142 STK24Q9Y6E0 443 aa12.05□□□□□ -0.48
SYNPO2-201ENST00000307142 PHKBQ93100 1093 aa12.05□□□□□ -0.48
SYNPO2-201ENST00000307142 PDE8BO95263 885 aa12.05□□□□□ -0.48
SYNPO2-201ENST00000307142 EPB41P11171 864 aaKnown RBP12.05□□□□□ -0.48
SYNPO2-201ENST00000307142 UBASH3AP57075 661 aa12.05□□□□□ -0.48
SYNPO2-201ENST00000307142 SMC1AQ14683 1233 aaKnown RBP12.05□□□□□ -0.48
SYNPO2-201ENST00000307142 RNF34Q969K3 372 aa12.05□□□□□ -0.48
SYNPO2-201ENST00000307142 ARID4AP29374 1257 aaPredicted RBP12.05□□□□□ -0.48
SYNPO2-201ENST00000307142 GRAPQ13588 217 aa12.05□□□□□ -0.48
SYNPO2-201ENST00000307142 OTUD6AQ7L8S5 288 aa12.05□□□□□ -0.48
SYNPO2-201ENST00000307142 CCDC91Q7Z6B0 441 aa12.05□□□□□ -0.48
SYNPO2-201ENST00000307142 GRAPLQ8TC17 118 aaPredicted RBP12.05□□□□□ -0.48
SYNPO2-201ENST00000307142 EDC3Q96F86 508 aaKnown RBP12.05□□□□□ -0.48
SYNPO2-201ENST00000307142 NCOA5Q9HCD5 579 aaKnown RBP12.05□□□□□ -0.48
SYNPO2-201ENST00000307142 ATP10DQ9P241 1426 aa12.05□□□□□ -0.48
SYNPO2-201ENST00000307142 ADORA1P30542 326 aa12.05□□□□□ -0.48
SYNPO2-201ENST00000307142 PHKA1P46020 1223 aa12.05□□□□□ -0.48
SYNPO2-201ENST00000307142 GIMAP6Q6P9H5 292 aa12.05□□□□□ -0.48
SYNPO2-201ENST00000307142 MCF2L2Q86YR7 1114 aa12.05□□□□□ -0.48
SYNPO2-201ENST00000307142 EXOC7Q9UPT5 735 aa12.05□□□□□ -0.48
SYNPO2-201ENST00000307142 AK9Q5TCS8 1911 aa12.05□□□□□ -0.48
SYNPO2-201ENST00000307142 GCOM1H8Y6P7 765 aaPredicted RBP12.04□□□□□ -0.48
SYNPO2-201ENST00000307142 POLR2MP0CAP2 368 aa12.04□□□□□ -0.48
SYNPO2-201ENST00000307142 ATP5JP18859 108 aa12.04□□□□□ -0.48
SYNPO2-201ENST00000307142 RPL13P26373 211 aaKnown RBP12.04□□□□□ -0.48
SYNPO2-201ENST00000307142 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.04□□□□□ -0.48
SYNPO2-201ENST00000307142 KCTD2Q14681 263 aa12.04□□□□□ -0.48
SYNPO2-201ENST00000307142 PUS3Q9BZE2 481 aaKnown RBP12.04□□□□□ -0.48
SYNPO2-201ENST00000307142 ZMYND15Q9H091 742 aa12.04□□□□□ -0.48
SYNPO2-201ENST00000307142 F13A1P00488 732 aa12.04□□□□□ -0.48
SYNPO2-201ENST00000307142 ZNF165P49910 485 aa12.04□□□□□ -0.48
SYNPO2-201ENST00000307142 AOC3Q16853 763 aa12.04□□□□□ -0.48
SYNPO2-201ENST00000307142 IFNL3Q8IZI9 196 aa12.04□□□□□ -0.48
SYNPO2-201ENST00000307142 MAP7D2Q96T17 732 aa12.04□□□□□ -0.48
SYNPO2-201ENST00000307142 AP5M1Q9H0R1 490 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms