RNA–Protein interactions for RNA: ENST00000247003.8

DDX49-201, Transcript of DEAD-box helicase 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX49, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-201ENST00000247003 LEMD3Q9Y2U8 911 aa17.51■□□□□ 0.39
DDX49-201ENST00000247003 BAZ2AQ9UIF9 1905 aaKnown RBP17.51■□□□□ 0.39
DDX49-201ENST00000247003 ZBTB22O15209 634 aa17.51■□□□□ 0.39
DDX49-201ENST00000247003 ST5P78524 1137 aa17.51■□□□□ 0.39
DDX49-201ENST00000247003 AKAP17AQ02040 695 aaKnown RBP17.51■□□□□ 0.39
DDX49-201ENST00000247003 NFIXQ14938 502 aa17.51■□□□□ 0.39
DDX49-201ENST00000247003 AMIGO3Q86WK7 504 aa17.51■□□□□ 0.39
DDX49-201ENST00000247003 FMR1NBQ8N0W7 255 aaPredicted RBP17.51■□□□□ 0.39
DDX49-201ENST00000247003 ZSCAN10Q96SZ4 725 aaPredicted RBP17.51■□□□□ 0.39
DDX49-201ENST00000247003 ANO10Q9NW15 660 aa17.51■□□□□ 0.39
DDX49-201ENST00000247003 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.51■□□□□ 0.39
DDX49-201ENST00000247003 ARPP21Q9UBL0 812 aaPredicted RBP17.51■□□□□ 0.39
DDX49-201ENST00000247003 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.51■□□□□ 0.39
DDX49-201ENST00000247003 XDHP47989 1333 aa17.51■□□□□ 0.39
DDX49-201ENST00000247003 A0A1B0GVL5 298 aa17.5■□□□□ 0.39
DDX49-201ENST00000247003 PPP6R2O75170 966 aa17.5■□□□□ 0.39
DDX49-201ENST00000247003 CALM1P0DP23 149 aa17.5■□□□□ 0.39
DDX49-201ENST00000247003 CALM2P0DP24 149 aa17.5■□□□□ 0.39
DDX49-201ENST00000247003 CALM3P0DP25 149 aa17.5■□□□□ 0.39
DDX49-201ENST00000247003 XBP1P17861 261 aa17.5■□□□□ 0.39
DDX49-201ENST00000247003 U2AF2P26368 475 aaKnown RBP eCLIP17.5■□□□□ 0.39
DDX49-201ENST00000247003 TM4SF1P30408 202 aa17.5■□□□□ 0.39
DDX49-201ENST00000247003 SLC39A14Q15043 492 aa17.5■□□□□ 0.39
DDX49-201ENST00000247003 IFIT1BQ5T764 474 aaKnown RBP17.5■□□□□ 0.39
DDX49-201ENST00000247003 CATIPQ7Z7H3 387 aa17.5■□□□□ 0.39
DDX49-201ENST00000247003 FANCBQ8NB91 859 aa17.5■□□□□ 0.39
DDX49-201ENST00000247003 TDRD7Q8NHU6 1098 aaKnown RBP17.5■□□□□ 0.39
DDX49-201ENST00000247003 NAT10Q9H0A0 1025 aaKnown RBP17.5■□□□□ 0.39
DDX49-201ENST00000247003 ATP8A2Q9NTI2 1148 aa17.5■□□□□ 0.39
DDX49-201ENST00000247003 AATFQ9NY61 560 aaKnown RBP eCLIP17.5■□□□□ 0.39
DDX49-201ENST00000247003 ZNF772Q68DY9 489 aaPredicted RBP17.49■□□□□ 0.39
DDX49-201ENST00000247003 ZNF804AQ7Z570 1209 aa17.49■□□□□ 0.39
DDX49-201ENST00000247003 WDR66Q8TBY9 1149 aa17.49■□□□□ 0.39
DDX49-201ENST00000247003 EP400Q96L91 3159 aa17.49■□□□□ 0.39
DDX49-201ENST00000247003 DLEC1Q9Y238 1755 aa17.49■□□□□ 0.39
DDX49-201ENST00000247003 UBR3Q6ZT12 1888 aa17.49■□□□□ 0.39
DDX49-201ENST00000247003 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.49■□□□□ 0.39
DDX49-201ENST00000247003 MMP1P03956 469 aa17.49■□□□□ 0.39
DDX49-201ENST00000247003 PRDX5P30044 214 aa17.49■□□□□ 0.39
DDX49-201ENST00000247003 NDUFA8P51970 172 aa17.49■□□□□ 0.39
DDX49-201ENST00000247003 CTR9Q6PD62 1173 aa17.49■□□□□ 0.39
DDX49-201ENST00000247003 CEP57L1Q8IYX8 460 aa17.49■□□□□ 0.39
DDX49-201ENST00000247003 ZNF384Q8TF68 577 aa17.49■□□□□ 0.39
DDX49-201ENST00000247003 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.49■□□□□ 0.39
DDX49-201ENST00000247003 RBM28Q9NW13 759 aaKnown RBP17.49■□□□□ 0.39
DDX49-201ENST00000247003 USP17L12C9JPN9 530 aa17.48■□□□□ 0.39
DDX49-201ENST00000247003 USP17L21D6R901 530 aa17.48■□□□□ 0.39
DDX49-201ENST00000247003 CMA1P23946 247 aa17.48■□□□□ 0.39
DDX49-201ENST00000247003 GSTO1P78417 241 aa17.48■□□□□ 0.39
DDX49-201ENST00000247003 SEC23AQ15436 765 aa17.48■□□□□ 0.39
DDX49-201ENST00000247003 NOSTRINQ8IVI9 506 aa17.48■□□□□ 0.39
DDX49-201ENST00000247003 CRACR2BQ8N4Y2 399 aaPredicted RBP17.48■□□□□ 0.39
DDX49-201ENST00000247003 NOL10Q9BSC4 688 aaKnown RBP17.48■□□□□ 0.39
DDX49-201ENST00000247003 RNF26Q9BY78 433 aaPredicted RBP17.48■□□□□ 0.39
DDX49-201ENST00000247003 BECN2A8MW95 431 aa17.47■□□□□ 0.39
DDX49-201ENST00000247003 LDHBP07195 334 aaKnown RBP17.47■□□□□ 0.39
DDX49-201ENST00000247003 HMGB2P26583 209 aaKnown RBP17.47■□□□□ 0.39
DDX49-201ENST00000247003 PDE4BQ07343 736 aa17.47■□□□□ 0.39
DDX49-201ENST00000247003 SLC27A3Q5K4L6 730 aa17.47■□□□□ 0.39
DDX49-201ENST00000247003 AMOTL1Q8IY63 956 aa17.47■□□□□ 0.39
DDX49-201ENST00000247003 ENAHQ8N8S7 591 aaPredicted RBP17.47■□□□□ 0.39
DDX49-201ENST00000247003 DCP1AQ9NPI6 582 aaPredicted RBP17.47■□□□□ 0.39
DDX49-201ENST00000247003 CYP2D7A0A087X1C5 515 aa17.47■□□□□ 0.39
DDX49-201ENST00000247003 OFD1O75665 1012 aa17.47■□□□□ 0.39
DDX49-201ENST00000247003 FGRP09769 529 aa17.47■□□□□ 0.39
DDX49-201ENST00000247003 NT5C2P49902 561 aa17.47■□□□□ 0.39
DDX49-201ENST00000247003 PRR5LQ6MZQ0 368 aa17.47■□□□□ 0.39
DDX49-201ENST00000247003 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.47■□□□□ 0.39
DDX49-201ENST00000247003 DIS3L2Q8IYB7 885 aaKnown RBP17.47■□□□□ 0.39
DDX49-201ENST00000247003 TRIM5Q9C035 493 aa17.47■□□□□ 0.39
DDX49-201ENST00000247003 FOXP1Q9H334 677 aaPredicted RBP17.47■□□□□ 0.39
DDX49-201ENST00000247003 BRWD3Q6RI45 1802 aa17.46■□□□□ 0.39
DDX49-201ENST00000247003 MYH6P13533 1939 aa17.46■□□□□ 0.39
DDX49-201ENST00000247003 MYH2Q9UKX2 1941 aa17.46■□□□□ 0.39
DDX49-201ENST00000247003 ORC4O43929 436 aa17.46■□□□□ 0.39
DDX49-201ENST00000247003 DDAH1O94760 285 aa17.46■□□□□ 0.39
DDX49-201ENST00000247003 PFKFB1P16118 471 aa17.46■□□□□ 0.39
DDX49-201ENST00000247003 MARCKSP29966 332 aaPredicted RBP17.46■□□□□ 0.39
DDX49-201ENST00000247003 NBPF11Q86T75 865 aa17.46■□□□□ 0.39
DDX49-201ENST00000247003 DRC7Q8IY82 874 aa17.46■□□□□ 0.39
DDX49-201ENST00000247003 CCDC82Q8N4S0 544 aa17.46■□□□□ 0.39
DDX49-201ENST00000247003 RBM17Q96I25 401 aaKnown RBP17.46■□□□□ 0.39
DDX49-201ENST00000247003 LRRC4BQ9NT99 713 aa17.46■□□□□ 0.39
DDX49-201ENST00000247003 IRS2Q9Y4H2 1338 aa17.45■□□□□ 0.38
DDX49-201ENST00000247003 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.45■□□□□ 0.38
DDX49-201ENST00000247003 AP5Z1O43299 807 aa17.45■□□□□ 0.38
DDX49-201ENST00000247003 PRDM1O75626 825 aa17.45■□□□□ 0.38
DDX49-201ENST00000247003 SBK1Q52WX2 424 aa17.45■□□□□ 0.38
DDX49-201ENST00000247003 RILPL1Q5EBL4 403 aa17.45■□□□□ 0.38
DDX49-201ENST00000247003 TXNRD3Q86VQ6 643 aa17.45■□□□□ 0.38
DDX49-201ENST00000247003 CUTAO60888 179 aa17.44■□□□□ 0.38
DDX49-201ENST00000247003 ZNF202O95125 648 aa17.44■□□□□ 0.38
DDX49-201ENST00000247003 BAG3O95817 575 aa17.44■□□□□ 0.38
DDX49-201ENST00000247003 GUCY1A2P33402 732 aa17.44■□□□□ 0.38
DDX49-201ENST00000247003 SYKP43405 635 aa17.44■□□□□ 0.38
DDX49-201ENST00000247003 USP5P45974 858 aa17.44■□□□□ 0.38
DDX49-201ENST00000247003 AXDND1Q5T1B0 1012 aaPredicted RBP17.44■□□□□ 0.38
DDX49-201ENST00000247003 C11orf57Q6ZUT1 292 aaPredicted RBP17.44■□□□□ 0.38
DDX49-201ENST00000247003 SPC24Q8NBT2 197 aa17.44■□□□□ 0.38
DDX49-201ENST00000247003 CEP131Q9UPN4 1083 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms