RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 TAF1DQ9H5J8 278 aaPredicted RBP13.07□□□□□ -0.32
TNFAIP3-201ENST00000237289 ANGEL1Q9UNK9 670 aaKnown RBP13.07□□□□□ -0.32
TNFAIP3-201ENST00000237289 TCRBV5S4A2TA0A5A2 114 aa13.07□□□□□ -0.32
TNFAIP3-201ENST00000237289 NFIAQ12857 509 aa13.07□□□□□ -0.32
TNFAIP3-201ENST00000237289 GNL2Q13823 731 aaKnown RBP13.07□□□□□ -0.32
TNFAIP3-201ENST00000237289 ALX1Q15699 326 aa13.07□□□□□ -0.32
TNFAIP3-201ENST00000237289 CCAR1Q8IX12 1150 aaKnown RBP13.07□□□□□ -0.32
TNFAIP3-201ENST00000237289 FAM184AQ8NB25 1140 aa13.07□□□□□ -0.32
TNFAIP3-201ENST00000237289 DYNLL2Q96FJ2 89 aa13.07□□□□□ -0.32
TNFAIP3-201ENST00000237289 ZNF341Q9BYN7 854 aa13.07□□□□□ -0.32
TNFAIP3-201ENST00000237289 SLKQ9H2G2 1235 aaPredicted RBP13.07□□□□□ -0.32
TNFAIP3-201ENST00000237289 SEC24BO95487 1268 aa13.06□□□□□ -0.32
TNFAIP3-201ENST00000237289 ABCB5Q2M3G0 1257 aa13.06□□□□□ -0.32
TNFAIP3-201ENST00000237289 PRAMEF18Q5VWM3 479 aa13.06□□□□□ -0.32
TNFAIP3-201ENST00000237289 MAP1SQ66K74 1059 aaPredicted RBP13.06□□□□□ -0.32
TNFAIP3-201ENST00000237289 CTCFLQ8NI51 663 aaPredicted RBP13.06□□□□□ -0.32
TNFAIP3-201ENST00000237289 CYP2D6P10635 497 aa13.06□□□□□ -0.32
TNFAIP3-201ENST00000237289 HSPA4P34932 840 aa13.06□□□□□ -0.32
TNFAIP3-201ENST00000237289 FAM47AQ5JRC9 791 aa13.06□□□□□ -0.32
TNFAIP3-201ENST00000237289 CTR9Q6PD62 1173 aa13.06□□□□□ -0.32
TNFAIP3-201ENST00000237289 DHX32Q7L7V1 743 aaKnown RBP13.06□□□□□ -0.32
TNFAIP3-201ENST00000237289 SHTN1A0MZ66 631 aa13.06□□□□□ -0.32
TNFAIP3-201ENST00000237289 E7EWF7 191 aa13.06□□□□□ -0.32
TNFAIP3-201ENST00000237289 ZNF280AP59817 542 aaPredicted RBP13.06□□□□□ -0.32
TNFAIP3-201ENST00000237289 CHST3Q7LGC8 479 aa13.06□□□□□ -0.32
TNFAIP3-201ENST00000237289 ZC3H15Q8WU90 426 aaKnown RBP13.06□□□□□ -0.32
TNFAIP3-201ENST00000237289 ZKSCAN3Q9BRR0 538 aa13.06□□□□□ -0.32
TNFAIP3-201ENST00000237289 AS3MTQ9HBK9 375 aa13.06□□□□□ -0.32
TNFAIP3-201ENST00000237289 HERC5Q9UII4 1024 aaKnown RBP13.06□□□□□ -0.32
TNFAIP3-201ENST00000237289 ABT1Q9ULW3 272 aaKnown RBP13.06□□□□□ -0.32
TNFAIP3-201ENST00000237289 CASZ1Q86V15 1759 aa13.06□□□□□ -0.32
TNFAIP3-201ENST00000237289 FAM83AQ86UY5 434 aa13.06□□□□□ -0.32
TNFAIP3-201ENST00000237289 SLC4A3P48751 1232 aa13.05□□□□□ -0.32
TNFAIP3-201ENST00000237289 CDK8P49336 464 aa13.05□□□□□ -0.32
TNFAIP3-201ENST00000237289 STK3Q13188 491 aa13.05□□□□□ -0.32
TNFAIP3-201ENST00000237289 LRRC2Q9BYS8 371 aa13.05□□□□□ -0.32
TNFAIP3-201ENST00000237289 PCDHAC2Q9Y5I4 1007 aa13.05□□□□□ -0.32
TNFAIP3-201ENST00000237289 PPP2R3BQ9Y5P8 575 aa13.05□□□□□ -0.32
TNFAIP3-201ENST00000237289 FKBP1CQ5VVH2 108 aa13.05□□□□□ -0.32
TNFAIP3-201ENST00000237289 TCEANC2Q96MN5 208 aa13.05□□□□□ -0.32
TNFAIP3-201ENST00000237289 CYP21A2P08686 494 aa13.05□□□□□ -0.32
TNFAIP3-201ENST00000237289 LDHDQ86WU2 507 aa13.05□□□□□ -0.32
TNFAIP3-201ENST00000237289 WRNIP1Q96S55 665 aa13.05□□□□□ -0.32
TNFAIP3-201ENST00000237289 NMRK2Q9NPI5 230 aa13.05□□□□□ -0.32
TNFAIP3-201ENST00000237289 LAMB2P55268 1798 aa13.05□□□□□ -0.32
TNFAIP3-201ENST00000237289 C12orf60Q5U649 245 aa13.04□□□□□ -0.32
TNFAIP3-201ENST00000237289 IDI2Q9BXS1 227 aa13.04□□□□□ -0.32
TNFAIP3-201ENST00000237289 SNX14Q9Y5W7 946 aa13.04□□□□□ -0.32
TNFAIP3-201ENST00000237289 SPEF2Q9C093 1822 aa13.04□□□□□ -0.32
TNFAIP3-201ENST00000237289 ANKRD31Q8N7Z5 1873 aa13.04□□□□□ -0.32
TNFAIP3-201ENST00000237289 CCDC196A0A1B0GTZ2 297 aa13.04□□□□□ -0.32
TNFAIP3-201ENST00000237289 GDF11O95390 407 aa13.04□□□□□ -0.32
TNFAIP3-201ENST00000237289 SLC10A4Q96EP9 437 aa13.04□□□□□ -0.32
TNFAIP3-201ENST00000237289 GMLQ99445 158 aa13.04□□□□□ -0.32
TNFAIP3-201ENST00000237289 TMOD4Q9NZQ9 345 aa13.04□□□□□ -0.32
TNFAIP3-201ENST00000237289 FAM196BA6NMK8 535 aa13.04□□□□□ -0.32
TNFAIP3-201ENST00000237289 MTMR14Q8NCE2 650 aa13.04□□□□□ -0.32
TNFAIP3-201ENST00000237289 TBC1D32Q96NH3 1257 aa13.04□□□□□ -0.32
TNFAIP3-201ENST00000237289 KIF5BP33176 963 aa13.04□□□□□ -0.32
TNFAIP3-201ENST00000237289 SBK1Q52WX2 424 aa13.04□□□□□ -0.32
TNFAIP3-201ENST00000237289 BRF1Q92994 677 aa13.04□□□□□ -0.32
TNFAIP3-201ENST00000237289 TMEM87BQ96K49 555 aa13.04□□□□□ -0.32
TNFAIP3-201ENST00000237289 ZSCAN31Q96LW9 406 aaPredicted RBP13.04□□□□□ -0.32
TNFAIP3-201ENST00000237289 IRS2Q9Y4H2 1338 aa13.03□□□□□ -0.32
TNFAIP3-201ENST00000237289 NRXN2Q9P2S2 1712 aa13.03□□□□□ -0.32
TNFAIP3-201ENST00000237289 GLIS2Q9BZE0 524 aaPredicted RBP13.03□□□□□ -0.32
TNFAIP3-201ENST00000237289 FOXD4L1Q9NU39 408 aa13.03□□□□□ -0.32
TNFAIP3-201ENST00000237289 TRIM22Q8IYM9 498 aa13.03□□□□□ -0.32
TNFAIP3-201ENST00000237289 CELF2O95319 508 aaKnown RBP13.03□□□□□ -0.32
TNFAIP3-201ENST00000237289 ASNSP08243 561 aa13.03□□□□□ -0.32
TNFAIP3-201ENST00000237289 RHBDL3P58872 404 aa13.03□□□□□ -0.32
TNFAIP3-201ENST00000237289 ICA1Q05084 483 aa13.03□□□□□ -0.32
TNFAIP3-201ENST00000237289 TRIM29Q14134 588 aa13.03□□□□□ -0.32
TNFAIP3-201ENST00000237289 ZYXQ15942 572 aaKnown RBP13.03□□□□□ -0.32
TNFAIP3-201ENST00000237289 Q6ZUG5 572 aa13.03□□□□□ -0.32
TNFAIP3-201ENST00000237289 CLIP2Q9UDT6 1046 aa13.03□□□□□ -0.32
TNFAIP3-201ENST00000237289 GOLGA8BA8MQT2 603 aa13.02□□□□□ -0.32
TNFAIP3-201ENST00000237289 MICU3Q86XE3 530 aa13.02□□□□□ -0.32
TNFAIP3-201ENST00000237289 RBM19Q9Y4C8 960 aaKnown RBP13.02□□□□□ -0.32
TNFAIP3-201ENST00000237289 CHADLQ6NUI6 762 aa13.02□□□□□ -0.33
TNFAIP3-201ENST00000237289 RUFY3Q7L099 469 aa13.02□□□□□ -0.33
TNFAIP3-201ENST00000237289 IL27Q8NEV9 243 aa13.02□□□□□ -0.33
TNFAIP3-201ENST00000237289 GOLGA8AA7E2F4 631 aa13.02□□□□□ -0.33
TNFAIP3-201ENST00000237289 ADM5C9JUS6 153 aa13.02□□□□□ -0.33
TNFAIP3-201ENST00000237289 CDKL5O76039 1030 aa13.02□□□□□ -0.33
TNFAIP3-201ENST00000237289 PLCD1P51178 756 aa13.02□□□□□ -0.33
TNFAIP3-201ENST00000237289 SLC44A5Q8NCS7 719 aa13.02□□□□□ -0.33
TNFAIP3-201ENST00000237289 KANSL2Q9H9L4 492 aa13.02□□□□□ -0.33
TNFAIP3-201ENST00000237289 KLF18A0A0U1RQI7 1052 aa13.02□□□□□ -0.33
TNFAIP3-201ENST00000237289 NT5C2P49902 561 aa13.02□□□□□ -0.33
TNFAIP3-201ENST00000237289 NECTIN1Q15223 517 aa13.02□□□□□ -0.33
TNFAIP3-201ENST00000237289 L3MBTL3Q96JM7 780 aaPredicted RBP13.02□□□□□ -0.33
TNFAIP3-201ENST00000237289 EPB41L4AQ9HCS5 686 aaPredicted RBP13.02□□□□□ -0.33
TNFAIP3-201ENST00000237289 SMC3Q9UQE7 1217 aa13.02□□□□□ -0.33
TNFAIP3-201ENST00000237289 XBP1P17861 261 aa13.01□□□□□ -0.33
TNFAIP3-201ENST00000237289 NBPF12Q5TAG4 269 aaPredicted RBP13.01□□□□□ -0.33
TNFAIP3-201ENST00000237289 SMC1BQ8NDV3 1235 aa13.01□□□□□ -0.33
TNFAIP3-201ENST00000237289 ZBTB43O43298 467 aa13.01□□□□□ -0.33
TNFAIP3-201ENST00000237289 GH2P01242 217 aa13.01□□□□□ -0.33
TNFAIP3-201ENST00000237289 STAG1Q8WVM7 1258 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms