RNA–Protein interactions for RNA: ENST00000201963.3

DNMT3B-201, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-201ENST00000201963 TMEM87AQ8NBN3 555 aa13.05□□□□□ -0.32
DNMT3B-201ENST00000201963 NAA15Q9BXJ9 866 aaKnown RBP13.05□□□□□ -0.32
DNMT3B-201ENST00000201963 GBP2P32456 591 aaPredicted RBP13.05□□□□□ -0.32
DNMT3B-201ENST00000201963 GBP6Q6ZN66 633 aa13.05□□□□□ -0.32
DNMT3B-201ENST00000201963 ZNF710Q8N1W2 664 aa13.05□□□□□ -0.32
DNMT3B-201ENST00000201963 NAPGQ99747 312 aaPredicted RBP13.05□□□□□ -0.32
DNMT3B-201ENST00000201963 KCNH3Q9ULD8 1083 aa13.05□□□□□ -0.32
DNMT3B-201ENST00000201963 KRT86O43790 486 aa13.05□□□□□ -0.32
DNMT3B-201ENST00000201963 UFL1O94874 794 aa13.05□□□□□ -0.32
DNMT3B-201ENST00000201963 PARP10Q53GL7 1025 aa13.05□□□□□ -0.32
DNMT3B-201ENST00000201963 DZIP1Q86YF9 867 aaKnown RBP13.05□□□□□ -0.32
DNMT3B-201ENST00000201963 DBNDD2Q9BQY9 259 aa13.05□□□□□ -0.32
DNMT3B-201ENST00000201963 TMOD2Q9NZR1 351 aa13.05□□□□□ -0.32
DNMT3B-201ENST00000201963 NDUFAB1O14561 156 aa13.04□□□□□ -0.32
DNMT3B-201ENST00000201963 TAF5LO75529 589 aa13.04□□□□□ -0.32
DNMT3B-201ENST00000201963 CNGA4Q8IV77 575 aa13.04□□□□□ -0.32
DNMT3B-201ENST00000201963 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.04□□□□□ -0.32
DNMT3B-201ENST00000201963 NLRP5P59047 1200 aa13.04□□□□□ -0.32
DNMT3B-201ENST00000201963 GOLGA8FQ08AF8 430 aa13.04□□□□□ -0.32
DNMT3B-201ENST00000201963 GOLGA8DPQ0D2H9 430 aa13.04□□□□□ -0.32
DNMT3B-201ENST00000201963 CCDC122Q5T0U0 273 aa13.04□□□□□ -0.32
DNMT3B-201ENST00000201963 KRI1Q8N9T8 703 aaKnown RBP13.04□□□□□ -0.32
DNMT3B-201ENST00000201963 PDE11AQ9HCR9 933 aa13.04□□□□□ -0.32
DNMT3B-201ENST00000201963 PPP2R2CQ9Y2T4 447 aa13.04□□□□□ -0.32
DNMT3B-201ENST00000201963 RPS6KA4O75676 772 aa13.04□□□□□ -0.32
DNMT3B-201ENST00000201963 IL6STP40189 918 aaPredicted RBP13.04□□□□□ -0.32
DNMT3B-201ENST00000201963 UBA7P41226 1012 aa13.04□□□□□ -0.32
DNMT3B-201ENST00000201963 KIF5AQ12840 1032 aa13.04□□□□□ -0.32
DNMT3B-201ENST00000201963 ADALQ6DHV7 355 aa13.04□□□□□ -0.32
DNMT3B-201ENST00000201963 KCNF1Q9H3M0 494 aa13.04□□□□□ -0.32
DNMT3B-201ENST00000201963 SLC5A1P13866 664 aa13.03□□□□□ -0.32
DNMT3B-201ENST00000201963 TIMM10P62072 90 aa13.03□□□□□ -0.32
DNMT3B-201ENST00000201963 MAP2K1Q02750 393 aaPredicted RBP13.03□□□□□ -0.32
DNMT3B-201ENST00000201963 PPARDQ03181 441 aa13.03□□□□□ -0.32
DNMT3B-201ENST00000201963 DPCR1Q3MIW9 517 aa13.03□□□□□ -0.32
DNMT3B-201ENST00000201963 DPP8Q6V1X1 898 aaPredicted RBP13.03□□□□□ -0.32
DNMT3B-201ENST00000201963 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.03□□□□□ -0.32
DNMT3B-201ENST00000201963 VPS16Q9H269 839 aa13.03□□□□□ -0.32
DNMT3B-201ENST00000201963 SEPT11Q9NVA2 429 aaKnown RBP13.03□□□□□ -0.32
DNMT3B-201ENST00000201963 PRDM4Q9UKN5 801 aa13.03□□□□□ -0.32
DNMT3B-201ENST00000201963 CTDP1Q9Y5B0 961 aaPredicted RBP13.03□□□□□ -0.32
DNMT3B-201ENST00000201963 INPP5BP32019 993 aa13.03□□□□□ -0.32
DNMT3B-201ENST00000201963 TCIRG1Q13488 830 aa13.03□□□□□ -0.32
DNMT3B-201ENST00000201963 CCDC144BQ3MJ40 725 aa13.03□□□□□ -0.32
DNMT3B-201ENST00000201963 CTCFLQ8NI51 663 aaPredicted RBP13.03□□□□□ -0.32
DNMT3B-201ENST00000201963 GOLGA5Q8TBA6 731 aa13.03□□□□□ -0.32
DNMT3B-201ENST00000201963 RBM17Q96I25 401 aaKnown RBP13.03□□□□□ -0.32
DNMT3B-201ENST00000201963 METTL22Q9BUU2 404 aaPredicted RBP13.03□□□□□ -0.32
DNMT3B-201ENST00000201963 GOPCQ9HD26 462 aa13.03□□□□□ -0.32
DNMT3B-201ENST00000201963 BRD3Q15059 726 aa13.03□□□□□ -0.32
DNMT3B-201ENST00000201963 PCDHA7Q9UN72 937 aa13.03□□□□□ -0.32
DNMT3B-201ENST00000201963 RRP15Q9Y3B9 282 aaKnown RBP13.03□□□□□ -0.32
DNMT3B-201ENST00000201963 GOLGA6CA6NDK9 693 aa13.02□□□□□ -0.32
DNMT3B-201ENST00000201963 USP27XA6NNY8 438 aa13.02□□□□□ -0.32
DNMT3B-201ENST00000201963 TMCO5BA8MYB1 307 aa13.02□□□□□ -0.32
DNMT3B-201ENST00000201963 GOLGA6DP0CG33 693 aa13.02□□□□□ -0.32
DNMT3B-201ENST00000201963 IDEP14735 1019 aa13.02□□□□□ -0.32
DNMT3B-201ENST00000201963 GYS2P54840 703 aa13.02□□□□□ -0.32
DNMT3B-201ENST00000201963 UBXN1Q04323 297 aa13.02□□□□□ -0.32
DNMT3B-201ENST00000201963 IKQ13123 557 aaPredicted RBP13.02□□□□□ -0.32
DNMT3B-201ENST00000201963 EAF2Q96CJ1 260 aaPredicted RBP13.02□□□□□ -0.32
DNMT3B-201ENST00000201963 ZCCHC17Q9NP64 241 aaKnown RBP13.02□□□□□ -0.32
DNMT3B-201ENST00000201963 ST7Q9NRC1 585 aa13.02□□□□□ -0.32
DNMT3B-201ENST00000201963 GOLGA6AQ9NYA3 693 aa13.02□□□□□ -0.32
DNMT3B-201ENST00000201963 LUC7L2Q9Y383 392 aaKnown RBP13.02□□□□□ -0.32
DNMT3B-201ENST00000201963 CDK12Q9NYV4 1490 aaPredicted RBP13.02□□□□□ -0.32
DNMT3B-201ENST00000201963 HEG1Q9ULI3 1381 aa13.02□□□□□ -0.32
DNMT3B-201ENST00000201963 POLR2DO15514 142 aaKnown RBP13.02□□□□□ -0.32
DNMT3B-201ENST00000201963 NEFHP12036 1026 aa13.02□□□□□ -0.32
DNMT3B-201ENST00000201963 NDUFA8P51970 172 aa13.02□□□□□ -0.32
DNMT3B-201ENST00000201963 MAP3K12Q12852 859 aa13.02□□□□□ -0.32
DNMT3B-201ENST00000201963 ITPK1Q13572 414 aa13.02□□□□□ -0.32
DNMT3B-201ENST00000201963 HLFQ16534 295 aa13.02□□□□□ -0.32
DNMT3B-201ENST00000201963 EAPPQ56P03 285 aaPredicted RBP13.02□□□□□ -0.32
DNMT3B-201ENST00000201963 SOGA3Q5TF21 947 aa13.02□□□□□ -0.32
DNMT3B-201ENST00000201963 SPECC1LQ69YQ0 1117 aa13.02□□□□□ -0.32
DNMT3B-201ENST00000201963 CCDC114Q96M63 670 aa13.02□□□□□ -0.32
DNMT3B-201ENST00000201963 MKRN1Q9UHC7 482 aaKnown RBP13.02□□□□□ -0.32
DNMT3B-201ENST00000201963 TRIM75PA6NK02 468 aa13.02□□□□□ -0.33
DNMT3B-201ENST00000201963 TACC1O75410 805 aa13.02□□□□□ -0.33
DNMT3B-201ENST00000201963 ITGA6P23229 1130 aa13.02□□□□□ -0.33
DNMT3B-201ENST00000201963 PNOCQ13519 176 aa13.02□□□□□ -0.33
DNMT3B-201ENST00000201963 MFSD6Q6ZSS7 791 aa13.02□□□□□ -0.33
DNMT3B-201ENST00000201963 OGFOD1Q8N543 542 aa13.02□□□□□ -0.33
DNMT3B-201ENST00000201963 FANCLQ9NW38 375 aa13.02□□□□□ -0.33
DNMT3B-201ENST00000201963 ZNF853P0CG23 659 aa13.02□□□□□ -0.33
DNMT3B-201ENST00000201963 CDC25BP30305 580 aa13.02□□□□□ -0.33
DNMT3B-201ENST00000201963 MYSM1Q5VVJ2 828 aa13.02□□□□□ -0.33
DNMT3B-201ENST00000201963 SEC62Q99442 399 aaKnown RBP13.02□□□□□ -0.33
DNMT3B-201ENST00000201963 BMP2KQ9NSY1 1161 aaPredicted RBP13.02□□□□□ -0.33
DNMT3B-201ENST00000201963 MORC2Q9Y6X9 1032 aaPredicted RBP13.02□□□□□ -0.33
DNMT3B-201ENST00000201963 CPDO75976 1380 aa13.01□□□□□ -0.33
DNMT3B-201ENST00000201963 ANKRD65E5RJM6 399 aa13.01□□□□□ -0.33
DNMT3B-201ENST00000201963 PFKFB1P16118 471 aa13.01□□□□□ -0.33
DNMT3B-201ENST00000201963 NOP2P46087 812 aaKnown RBP13.01□□□□□ -0.33
DNMT3B-201ENST00000201963 KRT83P78385 493 aa13.01□□□□□ -0.33
DNMT3B-201ENST00000201963 SLC15A2Q16348 729 aa13.01□□□□□ -0.33
DNMT3B-201ENST00000201963 RTN1Q16799 776 aa13.01□□□□□ -0.33
DNMT3B-201ENST00000201963 LONRF2Q1L5Z9 754 aa13.01□□□□□ -0.33
DNMT3B-201ENST00000201963 IFT81Q8WYA0 676 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms