RNA–Protein interactions for RNA: ENST00000198939.6

CHERP-201, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 5 BASIC

Gene CHERP, Length 4,084 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-201ENST00000198939 RABGGTAQ92696 567 aa11.75□□□□□ -0.53
CHERP-201ENST00000198939 GOLPH3LQ9H4A5 285 aa11.75□□□□□ -0.53
CHERP-201ENST00000198939 GOLGA6L9A6NEM1 432 aa11.74□□□□□ -0.53
CHERP-201ENST00000198939 CT47A1Q5JQC4 288 aaPredicted RBP11.74□□□□□ -0.53
CHERP-201ENST00000198939 PRR5LQ6MZQ0 368 aa11.74□□□□□ -0.53
CHERP-201ENST00000198939 HDXQ7Z353 690 aa11.74□□□□□ -0.53
CHERP-201ENST00000198939 CCDC91Q7Z6B0 441 aa11.74□□□□□ -0.53
CHERP-201ENST00000198939 CCDC12Q8WUD4 166 aaPredicted RBP11.74□□□□□ -0.53
CHERP-201ENST00000198939 RPGRQ92834 1020 aaKnown RBP11.74□□□□□ -0.53
CHERP-201ENST00000198939 RBM17Q96I25 401 aaKnown RBP11.74□□□□□ -0.53
CHERP-201ENST00000198939 NBPF7P0C2Y1 421 aaPredicted RBP11.74□□□□□ -0.53
CHERP-201ENST00000198939 DPCR1Q3MIW9 517 aa11.74□□□□□ -0.53
CHERP-201ENST00000198939 ERFEQ4G0M1 354 aa11.74□□□□□ -0.53
CHERP-201ENST00000198939 ERC1Q8IUD2 1116 aa11.74□□□□□ -0.53
CHERP-201ENST00000198939 CDC5LQ99459 802 aaKnown RBP11.74□□□□□ -0.53
CHERP-201ENST00000198939 MKRN1Q9UHC7 482 aaKnown RBP11.74□□□□□ -0.53
CHERP-201ENST00000198939 RCOR1Q9UKL0 485 aa11.74□□□□□ -0.53
CHERP-201ENST00000198939 ATF5Q9Y2D1 282 aaPredicted RBP11.74□□□□□ -0.53
CHERP-201ENST00000198939 NUP98P52948 1817 aa11.74□□□□□ -0.53
CHERP-201ENST00000198939 RIC1Q4ADV7 1423 aa11.74□□□□□ -0.53
CHERP-201ENST00000198939 DDX46Q7L014 1031 aaKnown RBP11.74□□□□□ -0.53
CHERP-201ENST00000198939 USP28Q96RU2 1077 aa11.74□□□□□ -0.53
CHERP-201ENST00000198939 FUT8Q9BYC5 575 aa11.74□□□□□ -0.53
CHERP-201ENST00000198939 ANKRD18BA2A2Z9 1011 aa11.73□□□□□ -0.53
CHERP-201ENST00000198939 CCDC151A5D8V7 595 aa11.73□□□□□ -0.53
CHERP-201ENST00000198939 PPFIA3O75145 1194 aa11.73□□□□□ -0.53
CHERP-201ENST00000198939 CTSWP56202 376 aa11.73□□□□□ -0.53
CHERP-201ENST00000198939 IFIT5Q13325 482 aaKnown RBP11.73□□□□□ -0.53
CHERP-201ENST00000198939 KRT32Q14532 448 aa11.73□□□□□ -0.53
CHERP-201ENST00000198939 BRD3Q15059 726 aa11.73□□□□□ -0.53
CHERP-201ENST00000198939 MAP4K1Q92918 833 aa11.73□□□□□ -0.53
CHERP-201ENST00000198939 C4AP0C0L4 1744 aa11.73□□□□□ -0.53
CHERP-201ENST00000198939 H0YIN7 160 aa11.73□□□□□ -0.53
CHERP-201ENST00000198939 ALDH1B1P30837 517 aa11.73□□□□□ -0.53
CHERP-201ENST00000198939 DDR1Q08345 913 aa11.73□□□□□ -0.53
CHERP-201ENST00000198939 SF3B3Q15393 1217 aaKnown RBP11.73□□□□□ -0.53
CHERP-201ENST00000198939 TXLNAP40222 546 aa11.73□□□□□ -0.53
CHERP-201ENST00000198939 TMC4Q7Z404 712 aa11.73□□□□□ -0.53
CHERP-201ENST00000198939 PACS2Q86VP3 889 aa11.73□□□□□ -0.53
CHERP-201ENST00000198939 SUCLG2Q96I99 432 aa11.73□□□□□ -0.53
CHERP-201ENST00000198939 KIAA1468Q9P260 1216 aa11.73□□□□□ -0.53
CHERP-201ENST00000198939 PPP1R1BQ9UD71 204 aaPredicted RBP11.73□□□□□ -0.53
CHERP-201ENST00000198939 APOBRQ0VD83 1088 aa11.72□□□□□ -0.53
CHERP-201ENST00000198939 NEK1Q96PY6 1258 aa11.72□□□□□ -0.53
CHERP-201ENST00000198939 FBXO3Q9UK99 471 aa11.72□□□□□ -0.53
CHERP-201ENST00000198939 PPP2R2CQ9Y2T4 447 aa11.72□□□□□ -0.53
CHERP-201ENST00000198939 ANKRD36CQ5JPF3 1778 aa11.72□□□□□ -0.53
CHERP-201ENST00000198939 H3BQF6 201 aa11.72□□□□□ -0.53
CHERP-201ENST00000198939 CASP7P55210 303 aa11.72□□□□□ -0.53
CHERP-201ENST00000198939 TOB2Q14106 344 aaPredicted RBP11.72□□□□□ -0.53
CHERP-201ENST00000198939 Q6ZUG5 572 aa11.72□□□□□ -0.53
CHERP-201ENST00000198939 HMG20BQ9P0W2 317 aa11.72□□□□□ -0.53
CHERP-201ENST00000198939 PUF60Q9UHX1 559 aaKnown RBP11.72□□□□□ -0.53
CHERP-201ENST00000198939 FAN1Q9Y2M0 1017 aa11.72□□□□□ -0.53
CHERP-201ENST00000198939 CD2APQ9Y5K6 639 aa11.72□□□□□ -0.53
CHERP-201ENST00000198939 ARHGAP6O43182 974 aa11.72□□□□□ -0.53
CHERP-201ENST00000198939 ATP2B1P20020 1258 aa11.72□□□□□ -0.53
CHERP-201ENST00000198939 IGHMBP2P38935 993 aaKnown RBP11.72□□□□□ -0.53
CHERP-201ENST00000198939 TGFB2P61812 414 aa11.72□□□□□ -0.53
CHERP-201ENST00000198939 MTX1Q13505 466 aa11.72□□□□□ -0.53
CHERP-201ENST00000198939 LMBR1LQ6UX01 489 aa11.72□□□□□ -0.53
CHERP-201ENST00000198939 LRRC2Q9BYS8 371 aa11.72□□□□□ -0.53
CHERP-201ENST00000198939 POTEB2H3BUK9 544 aa11.71□□□□□ -0.53
CHERP-201ENST00000198939 KIAA0754O94854 1291 aa11.71□□□□□ -0.53
CHERP-201ENST00000198939 CSF1RP07333 972 aa11.71□□□□□ -0.53
CHERP-201ENST00000198939 CHMP4BP1P59074 171 aa11.71□□□□□ -0.53
CHERP-201ENST00000198939 GOLGA8FQ08AF8 430 aa11.71□□□□□ -0.53
CHERP-201ENST00000198939 GOLGA8DPQ0D2H9 430 aa11.71□□□□□ -0.53
CHERP-201ENST00000198939 RABL6Q3YEC7 729 aaPredicted RBP11.71□□□□□ -0.53
CHERP-201ENST00000198939 TRIM65Q6PJ69 517 aa11.71□□□□□ -0.53
CHERP-201ENST00000198939 UBXN6Q9BZV1 441 aa11.71□□□□□ -0.53
CHERP-201ENST00000198939 BOLA2Q9H3K6 86 aa11.71□□□□□ -0.53
CHERP-201ENST00000198939 BICC1Q9H694 974 aaKnown RBP11.71□□□□□ -0.53
CHERP-201ENST00000198939 PES1O00541 588 aaKnown RBP11.71□□□□□ -0.53
CHERP-201ENST00000198939 NPR1P16066 1061 aa11.71□□□□□ -0.53
CHERP-201ENST00000198939 OLFM4Q6UX06 510 aa11.71□□□□□ -0.53
CHERP-201ENST00000198939 IQUBQ8NA54 791 aa11.71□□□□□ -0.53
CHERP-201ENST00000198939 BRD2P25440 801 aaKnown RBP11.71□□□□□ -0.54
CHERP-201ENST00000198939 KARSQ15046 597 aaKnown RBP11.71□□□□□ -0.54
CHERP-201ENST00000198939 G3BP1Q13283 466 aaKnown RBP eCLIP11.71□□□□□ -0.542e-6■■□□□ 13.5
CHERP-201ENST00000198939 SYNE3Q6ZMZ3 975 aa11.71□□□□□ -0.54
CHERP-201ENST00000198939 CNKSR1Q969H4 720 aa11.71□□□□□ -0.54
CHERP-201ENST00000198939 MASTLQ96GX5 879 aa11.71□□□□□ -0.54
CHERP-201ENST00000198939 BAG1Q99933 345 aaPredicted RBP11.71□□□□□ -0.54
CHERP-201ENST00000198939 RTL9Q8NET4 1388 aa11.7□□□□□ -0.54
CHERP-201ENST00000198939 CCT2P78371 535 aaKnown RBP11.7□□□□□ -0.54
CHERP-201ENST00000198939 KCNB2Q92953 911 aa11.7□□□□□ -0.54
CHERP-201ENST00000198939 GBP3Q9H0R5 595 aa11.7□□□□□ -0.54
CHERP-201ENST00000198939 CCDC8Q9H0W5 538 aaPredicted RBP11.7□□□□□ -0.54
CHERP-201ENST00000198939 MAP3K9P80192 1104 aa11.7□□□□□ -0.54
CHERP-201ENST00000198939 FOXO4P98177 505 aa11.7□□□□□ -0.54
CHERP-201ENST00000198939 POLA2Q14181 598 aa11.7□□□□□ -0.54
CHERP-201ENST00000198939 GRIPAP1Q4V328 841 aa11.7□□□□□ -0.54
CHERP-201ENST00000198939 DNAJC21Q5F1R6 531 aaKnown RBP11.7□□□□□ -0.54
CHERP-201ENST00000198939 TTLL11Q8NHH1 800 aa11.7□□□□□ -0.54
CHERP-201ENST00000198939 CRAMP1Q96RY5 1269 aa11.7□□□□□ -0.54
CHERP-201ENST00000198939 RUFY1Q96T51 708 aa11.7□□□□□ -0.54
CHERP-201ENST00000198939 N4BP2Q86UW6 1770 aaPredicted RBP11.7□□□□□ -0.54
CHERP-201ENST00000198939 AFDNP55196 1824 aaKnown RBP11.7□□□□□ -0.54
CHERP-201ENST00000198939 WDHD1O75717 1129 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms