RNA–Protein interactions for RNA: ENSMUST00000190193.7

Col6a5-203, Transcript of Collagen alpha-5(VI) chain, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Col6a5, Length 9,289 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5-203ENSMUST00000190193 Krt18P05784 423 aa11.17□□□□□ -0.62
Col6a5-203ENSMUST00000190193 Drc3Q9D5E4 523 aa11.17□□□□□ -0.62
Col6a5-203ENSMUST00000190193 Zscan18E9PUD6 809 aa11.17□□□□□ -0.62
Col6a5-203ENSMUST00000190193 Krt13P08730 437 aa11.17□□□□□ -0.62
Col6a5-203ENSMUST00000190193 Pde11aP0C1Q2 933 aa11.17□□□□□ -0.62
Col6a5-203ENSMUST00000190193 NesQ6P5H2 1864 aaKnown RBP11.17□□□□□ -0.62
Col6a5-203ENSMUST00000190193 Fam50bQ9WTJ8 334 aa11.17□□□□□ -0.62
Col6a5-203ENSMUST00000190193 Ppp2r5bQ6PD28 497 aa11.17□□□□□ -0.62
Col6a5-203ENSMUST00000190193 Tsr1Q5SWD9 803 aa11.17□□□□□ -0.62
Col6a5-203ENSMUST00000190193 Ccdc70Q9D9B0 223 aa11.17□□□□□ -0.62
Col6a5-203ENSMUST00000190193 Serpini1O35684 410 aa11.17□□□□□ -0.62
Col6a5-203ENSMUST00000190193 Actn3O88990 900 aaKnown RBP11.17□□□□□ -0.62
Col6a5-203ENSMUST00000190193 Nucks1Q80XU3 234 aaKnown RBP11.17□□□□□ -0.62
Col6a5-203ENSMUST00000190193 ParvgQ9ERD8 331 aa11.17□□□□□ -0.62
Col6a5-203ENSMUST00000190193 Ptpn14Q62130 1189 aa11.16□□□□□ -0.62
Col6a5-203ENSMUST00000190193 Stk38lQ7TSE6 464 aa11.16□□□□□ -0.62
Col6a5-203ENSMUST00000190193 Dtnbp1Q91WZ8 352 aa11.16□□□□□ -0.62
Col6a5-203ENSMUST00000190193 Rnf216P58283 853 aa11.16□□□□□ -0.62
Col6a5-203ENSMUST00000190193 Dcaf17Q3TUL7 519 aa11.16□□□□□ -0.62
Col6a5-203ENSMUST00000190193 Ccdc40Q8BI79 1192 aa11.16□□□□□ -0.62
Col6a5-203ENSMUST00000190193 Klhl40Q9D783 621 aa11.16□□□□□ -0.62
Col6a5-203ENSMUST00000190193 Myh15E9Q264 1925 aa11.16□□□□□ -0.62
Col6a5-203ENSMUST00000190193 Tnrc6bQ8BKI2 1810 aaKnown RBP11.16□□□□□ -0.62
Col6a5-203ENSMUST00000190193 Rbm12b2Q66JV4 834 aaKnown RBP11.16□□□□□ -0.62
Col6a5-203ENSMUST00000190193 Anks6Q6GQX6 883 aa11.16□□□□□ -0.62
Col6a5-203ENSMUST00000190193 Cep104Q80V31 926 aa11.16□□□□□ -0.62
Col6a5-203ENSMUST00000190193 Fam228aQ8CDW1 299 aa11.16□□□□□ -0.62
Col6a5-203ENSMUST00000190193 IkbkgO88522 412 aa11.16□□□□□ -0.62
Col6a5-203ENSMUST00000190193 Rps6ka1P18653 724 aa11.16□□□□□ -0.62
Col6a5-203ENSMUST00000190193 Lin9Q8C735 542 aa11.16□□□□□ -0.62
Col6a5-203ENSMUST00000190193 Kif2cQ922S8 721 aa11.16□□□□□ -0.62
Col6a5-203ENSMUST00000190193 RbsnQ80Y56 783 aa11.16□□□□□ -0.62
Col6a5-203ENSMUST00000190193 Arhgef11Q68FM7 1552 aa11.16□□□□□ -0.62
Col6a5-203ENSMUST00000190193 Myo1aO88329 1043 aa11.16□□□□□ -0.62
Col6a5-203ENSMUST00000190193 Rab34Q64008 259 aa11.16□□□□□ -0.62
Col6a5-203ENSMUST00000190193 Iws1Q8C1D8 766 aa11.16□□□□□ -0.62
Col6a5-203ENSMUST00000190193 Prr16A3KMN5 304 aa11.16□□□□□ -0.62
Col6a5-203ENSMUST00000190193 AU019823E9PUQ3 292 aa11.15□□□□□ -0.62
Col6a5-203ENSMUST00000190193 Mast3Q3U214 1321 aa11.15□□□□□ -0.62
Col6a5-203ENSMUST00000190193 Ccne1Q61457 408 aa11.15□□□□□ -0.62
Col6a5-203ENSMUST00000190193 Ccdc189Q6NZQ0 333 aa11.15□□□□□ -0.62
Col6a5-203ENSMUST00000190193 Traf1P39428 409 aa11.15□□□□□ -0.62
Col6a5-203ENSMUST00000190193 Q3UJC8 639 aa11.15□□□□□ -0.62
Col6a5-203ENSMUST00000190193 Tekt2Q922G7 430 aa11.15□□□□□ -0.62
Col6a5-203ENSMUST00000190193 Mrps22Q9CXW2 359 aa11.15□□□□□ -0.62
Col6a5-203ENSMUST00000190193 Calr3Q9D9Q6 380 aa11.15□□□□□ -0.62
Col6a5-203ENSMUST00000190193 Tpcn1Q9EQJ0 817 aa11.15□□□□□ -0.62
Col6a5-203ENSMUST00000190193 Pacsin2Q9WVE8 486 aaKnown RBP11.15□□□□□ -0.62
Col6a5-203ENSMUST00000190193 Psma7Q9Z2U0 248 aa11.15□□□□□ -0.62
Col6a5-203ENSMUST00000190193 Bpifb4A2BGH0 617 aa11.15□□□□□ -0.62
Col6a5-203ENSMUST00000190193 Parp2O88554 559 aa11.15□□□□□ -0.62
Col6a5-203ENSMUST00000190193 F2rP30558 430 aa11.15□□□□□ -0.62
Col6a5-203ENSMUST00000190193 Homer2Q9QWW1 354 aa11.15□□□□□ -0.62
Col6a5-203ENSMUST00000190193 3425401B19RikD3Z1D3 1412 aa11.15□□□□□ -0.62
Col6a5-203ENSMUST00000190193 Abca16E9PWJ7 1678 aa11.15□□□□□ -0.62
Col6a5-203ENSMUST00000190193 Lmnb2P21619 596 aaKnown RBP11.15□□□□□ -0.62
Col6a5-203ENSMUST00000190193 Mum1l1Q4VA55 681 aa11.15□□□□□ -0.62
Col6a5-203ENSMUST00000190193 Leo1Q5XJE5 667 aa11.15□□□□□ -0.62
Col6a5-203ENSMUST00000190193 Cnnm4Q69ZF7 771 aa11.15□□□□□ -0.62
Col6a5-203ENSMUST00000190193 Rabgap1A2AWA9 1064 aa11.15□□□□□ -0.63
Col6a5-203ENSMUST00000190193 Rapgef1Q3UHC1 1224 aa11.15□□□□□ -0.63
Col6a5-203ENSMUST00000190193 Trim37Q6PCX9 961 aa11.15□□□□□ -0.63
Col6a5-203ENSMUST00000190193 Ppp2r2cQ8BG02 447 aa11.15□□□□□ -0.63
Col6a5-203ENSMUST00000190193 Skor2A7M7C7 1008 aa11.14□□□□□ -0.63
Col6a5-203ENSMUST00000190193 Slc26a7Q8R2Z3 656 aa11.14□□□□□ -0.63
Col6a5-203ENSMUST00000190193 Psmd6Q99JI4 389 aa11.14□□□□□ -0.63
Col6a5-203ENSMUST00000190193 Slc4a4O88343 1079 aa11.14□□□□□ -0.63
Col6a5-203ENSMUST00000190193 Mcm7Q61881 719 aaKnown RBP11.14□□□□□ -0.63
Col6a5-203ENSMUST00000190193 Frmpd2A0A140LI67 1392 aa11.14□□□□□ -0.63
Col6a5-203ENSMUST00000190193 ChkbO55229 394 aa11.14□□□□□ -0.63
Col6a5-203ENSMUST00000190193 Ca8P28651 291 aa11.14□□□□□ -0.63
Col6a5-203ENSMUST00000190193 Scaf1Q5U4C3 1256 aaKnown RBP11.14□□□□□ -0.63
Col6a5-203ENSMUST00000190193 Fgd5Q80UZ0 1219 aa11.14□□□□□ -0.63
Col6a5-203ENSMUST00000190193 GlmnQ8BZM1 596 aa11.14□□□□□ -0.63
Col6a5-203ENSMUST00000190193 Stk10O55098 966 aa11.14□□□□□ -0.63
Col6a5-203ENSMUST00000190193 Zbtb3Q91X45 518 aa11.14□□□□□ -0.63
Col6a5-203ENSMUST00000190193 Uggt2E9Q4X2 1504 aa11.14□□□□□ -0.63
Col6a5-203ENSMUST00000190193 Gm6121L7MUF1 212 aa11.14□□□□□ -0.63
Col6a5-203ENSMUST00000190193 Cage1Q5IR70 849 aa11.14□□□□□ -0.63
Col6a5-203ENSMUST00000190193 Rsad2Q8CBB9 362 aa11.14□□□□□ -0.63
Col6a5-203ENSMUST00000190193 Igf1rQ60751 1373 aa11.14□□□□□ -0.63
Col6a5-203ENSMUST00000190193 Cabs1Q8C633 391 aa11.14□□□□□ -0.63
Col6a5-203ENSMUST00000190193 Amotl2Q8K371 772 aa11.14□□□□□ -0.63
Col6a5-203ENSMUST00000190193 Cep85lA0A1W2P884 806 aa11.14□□□□□ -0.63
Col6a5-203ENSMUST00000190193 NsmfQ99NF2 532 aa11.14□□□□□ -0.63
Col6a5-203ENSMUST00000190193 Rab11fip4Q8BQP8 635 aa11.13□□□□□ -0.63
Col6a5-203ENSMUST00000190193 Etf1Q8BWY3 437 aaKnown RBP11.13□□□□□ -0.63
Col6a5-203ENSMUST00000190193 NelfbQ8C4Y3 580 aa11.13□□□□□ -0.63
Col6a5-203ENSMUST00000190193 Tceanc2Q8R2M0 207 aa11.13□□□□□ -0.63
Col6a5-203ENSMUST00000190193 PpardP35396 440 aa11.13□□□□□ -0.63
Col6a5-203ENSMUST00000190193 Plb1Q3TTY0 1478 aa11.13□□□□□ -0.63
Col6a5-203ENSMUST00000190193 Mroh7A2AVR2 1279 aa11.13□□□□□ -0.63
Col6a5-203ENSMUST00000190193 Zfp651E9PZ11 729 aa11.13□□□□□ -0.63
Col6a5-203ENSMUST00000190193 Nub1P54729 614 aa11.13□□□□□ -0.63
Col6a5-203ENSMUST00000190193 Atp2b3Q0VF55 1220 aa11.13□□□□□ -0.63
Col6a5-203ENSMUST00000190193 Tmx1Q8VBT0 278 aa11.13□□□□□ -0.63
Col6a5-203ENSMUST00000190193 Ythdc2B2RR83 1445 aaKnown RBP11.13□□□□□ -0.63
Col6a5-203ENSMUST00000190193 VeztQ3ZK22 780 aa11.13□□□□□ -0.63
Col6a5-203ENSMUST00000190193 P3h4Q8K2B0 443 aa11.13□□□□□ -0.63
Col6a5-203ENSMUST00000190193 Fam133bQ9CVI2 245 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 51.8 ms