RNA–Protein interactions for RNA: ENSMUST00000168162.4

Pdgfra-202, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pdgfra, Length 6,834 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-202ENSMUST00000168162 Prex2Q3LAC4 1598 aa11.48□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Psmd14O35593 310 aa11.48□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Tnfaip1O70479 316 aa11.48□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Rab3gap2Q8BMG7 1366 aa11.48□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 P4hbP09103 509 aaKnown RBP11.48□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Cacnb3P54285 484 aa11.48□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Utp14bQ6EJB6 756 aaKnown RBP11.48□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Zmynd10Q99ML0 440 aa11.48□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Them5Q9CQJ0 248 aa11.48□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Tbc1d8bA3KGB4 1114 aa11.48□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Kctd12bQ8C7J6 292 aa11.48□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 SltmQ8CH25 1031 aaKnown RBP11.48□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Abcg4Q91WA9 646 aa11.48□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Arid5bQ8BM75 1188 aaKnown RBP11.48□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Cfap36Q8C6E0 343 aa11.48□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Mdh1bQ5F204 500 aa11.48□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Ctnna3Q65CL1 895 aa11.48□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Prr18Q6PAN7 307 aa11.48□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Pknox2Q8BG99 474 aa11.48□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Lrit1Q8K099 624 aa11.48□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Smc3Q9CW03 1217 aaKnown RBP11.48□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Cracr2aQ3UP38 310 aa11.47□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Man1c1Q6NXK9 625 aa11.47□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Ano6Q6P9J9 911 aa11.47□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Zkscan8Q8BSL0 588 aa11.47□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Col23a1Q8K4G2 532 aa11.47□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Acsl1P41216 699 aa11.47□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Disp1Q3TDN0 1521 aa11.47□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Znhit6Q3UFB2 460 aaKnown RBP11.47□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Oxr1Q4KMM3 866 aa11.47□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Pde1aQ61481 565 aa11.47□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Slc13a5Q67BT3 572 aa11.47□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Zbtb1Q91VL9 713 aa11.47□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Mipol1Q9D9F8 279 aa11.47□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Strn3Q9ERG2 796 aa11.47□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Unc13aQ4KUS2 1712 aa11.47□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Mybbp1aQ7TPV4 1344 aaKnown RBP11.47□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Rnf19aP50636 840 aa11.47□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Ankrd45Q810N6 248 aa11.47□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Ddx27Q921N6 760 aaKnown RBP11.47□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Calcoco2A2A6M5 331 aa11.47□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Stn1Q8K2X3 378 aa11.47□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Atp6v0a2P15920 856 aa11.46□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Uba5Q8VE47 403 aa11.46□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Man1b1A2AJ15 658 aa11.46□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Metap2O08663 478 aaKnown RBP11.46□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Mctp2Q5RJH2 878 aa11.46□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Knop1Q9Z2Q2 478 aaKnown RBP11.46□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Slc32a1O35633 525 aa11.46□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Nck2O55033 380 aa11.46□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Pde6bP23440 856 aa11.46□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Zfp444Q3TDV8 331 aaKnown RBP11.46□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 SdhbQ9CQA3 282 aa11.46□□□□□ -0.57
Pdgfra-202ENSMUST00000168162 Esx1O88933 382 aa11.46□□□□□ -0.58
Pdgfra-202ENSMUST00000168162 Ercc3P49135 783 aa11.46□□□□□ -0.58
Pdgfra-202ENSMUST00000168162 CstaP56567 97 aa11.46□□□□□ -0.58
Pdgfra-202ENSMUST00000168162 Ankrd13aQ80UP5 588 aa11.46□□□□□ -0.58
Pdgfra-202ENSMUST00000168162 Ces1fQ91WU0 561 aa11.46□□□□□ -0.58
Pdgfra-202ENSMUST00000168162 Echdc1Q9D9V3 322 aa11.46□□□□□ -0.58
Pdgfra-202ENSMUST00000168162 Ces1bD3Z5G7 567 aa11.46□□□□□ -0.58
Pdgfra-202ENSMUST00000168162 Wdr70Q3TWF6 657 aa11.46□□□□□ -0.58
Pdgfra-202ENSMUST00000168162 Leo1Q5XJE5 667 aa11.46□□□□□ -0.58
Pdgfra-202ENSMUST00000168162 Acap3Q6NXL5 833 aa11.46□□□□□ -0.58
Pdgfra-202ENSMUST00000168162 Luzp1Q8R4U7 1068 aaKnown RBP11.46□□□□□ -0.58
Pdgfra-202ENSMUST00000168162 Yaf2Q99LW6 179 aa11.46□□□□□ -0.58
Pdgfra-202ENSMUST00000168162 Ylpm1Q9R0I7 1386 aaKnown RBP11.46□□□□□ -0.58
Pdgfra-202ENSMUST00000168162 Abcc2Q8VI47 1543 aa11.46□□□□□ -0.58
Pdgfra-202ENSMUST00000168162 Ctnnbl1Q9CWL8 563 aaKnown RBP11.46□□□□□ -0.58
Pdgfra-202ENSMUST00000168162 Polr3eQ9CZT4 710 aa11.46□□□□□ -0.58
Pdgfra-202ENSMUST00000168162 Taf7lQ9D3R9 471 aa11.45□□□□□ -0.58
Pdgfra-202ENSMUST00000168162 Zfyve16Q80U44 1528 aa11.45□□□□□ -0.58
Pdgfra-202ENSMUST00000168162 Nid2O88322 1403 aa11.45□□□□□ -0.58
Pdgfra-202ENSMUST00000168162 Surf1P09925 306 aa11.45□□□□□ -0.58
Pdgfra-202ENSMUST00000168162 SelpQ01102 768 aa11.45□□□□□ -0.58
Pdgfra-202ENSMUST00000168162 DeptorQ570Y9 409 aa11.45□□□□□ -0.58
Pdgfra-202ENSMUST00000168162 Col20a1Q923P0 1320 aa11.45□□□□□ -0.58
Pdgfra-202ENSMUST00000168162 Pfkfb3A7UAK5 555 aa11.45□□□□□ -0.58
Pdgfra-202ENSMUST00000168162 Zfp957Q3UT76 567 aa11.45□□□□□ -0.58
Pdgfra-202ENSMUST00000168162 Phf20Q8BLG0 1010 aaKnown RBP11.45□□□□□ -0.58
Pdgfra-202ENSMUST00000168162 SetQ9EQU5 289 aaKnown RBP11.45□□□□□ -0.58
Pdgfra-202ENSMUST00000168162 Gm4924A0A1B0GR71 966 aa11.45□□□□□ -0.58
Pdgfra-202ENSMUST00000168162 Atp5c1Q91VR2 298 aaKnown RBP11.45□□□□□ -0.58
Pdgfra-202ENSMUST00000168162 Stxbp2Q64324 593 aa11.45□□□□□ -0.58
Pdgfra-202ENSMUST00000168162 Fam160b1Q8CDM8 764 aa11.45□□□□□ -0.58
Pdgfra-202ENSMUST00000168162 Rab30Q923S9 203 aa11.45□□□□□ -0.58
Pdgfra-202ENSMUST00000168162 Ccdc70Q9D9B0 223 aa11.45□□□□□ -0.58
Pdgfra-202ENSMUST00000168162 Gja10Q9WUS4 505 aa11.45□□□□□ -0.58
Pdgfra-202ENSMUST00000168162 Eif5P59325 429 aaKnown RBP11.44□□□□□ -0.58
Pdgfra-202ENSMUST00000168162 Fam198bQ3UPI1 517 aa11.44□□□□□ -0.58
Pdgfra-202ENSMUST00000168162 Cyp2c23E9Q5K4 494 aa11.44□□□□□ -0.58
Pdgfra-202ENSMUST00000168162 Irf6P97431 467 aa11.44□□□□□ -0.58
Pdgfra-202ENSMUST00000168162 Uimc1Q5U5Q9 727 aa11.44□□□□□ -0.58
Pdgfra-202ENSMUST00000168162 Rnf19bA2A7Q9 732 aa11.44□□□□□ -0.58
Pdgfra-202ENSMUST00000168162 Slc35g1Q8BY79 368 aa11.44□□□□□ -0.58
Pdgfra-202ENSMUST00000168162 Lmbr1Q9JIT0 490 aa11.44□□□□□ -0.58
Pdgfra-202ENSMUST00000168162 Dapk3O54784 448 aa11.44□□□□□ -0.58
Pdgfra-202ENSMUST00000168162 Axin2O88566 840 aa11.44□□□□□ -0.58
Pdgfra-202ENSMUST00000168162 Pde1cQ64338 706 aa11.44□□□□□ -0.58
Pdgfra-202ENSMUST00000168162 Trappc6aQ78XR0 159 aa11.44□□□□□ -0.58
Pdgfra-202ENSMUST00000168162 Ccdc6D3YZP9 469 aa11.44□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 28.6 ms