RNA–Protein interactions for RNA: ENSMUST00000078409.4

Trim61-201, Transcript of MCG22896, isoform CRA_b, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim61, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim61-201ENSMUST00000078409 Sirt2Q8VDQ8 389 aa12.27□□□□□ -0.45
Trim61-201ENSMUST00000078409 Mbd3Q9Z2D8 285 aaKnown RBP12.27□□□□□ -0.45
Trim61-201ENSMUST00000078409 Homer1Q9Z2Y3 366 aa12.27□□□□□ -0.45
Trim61-201ENSMUST00000078409 Ankrd13cQ3UX43 541 aa12.26□□□□□ -0.45
Trim61-201ENSMUST00000078409 Mpp4Q6P7F1 635 aa12.26□□□□□ -0.45
Trim61-201ENSMUST00000078409 Triml1Q8BVP1 470 aa12.26□□□□□ -0.45
Trim61-201ENSMUST00000078409 Bicd2Q921C5 820 aa12.26□□□□□ -0.45
Trim61-201ENSMUST00000078409 CenpqQ9CPQ5 267 aa12.26□□□□□ -0.45
Trim61-201ENSMUST00000078409 Foxp4Q9DBY0 795 aaKnown RBP12.26□□□□□ -0.45
Trim61-201ENSMUST00000078409 Il20Q9JKV9 176 aa12.26□□□□□ -0.45
Trim61-201ENSMUST00000078409 Itgb1bp2Q9R000 350 aa12.26□□□□□ -0.45
Trim61-201ENSMUST00000078409 Gja10Q9WUS4 505 aa12.26□□□□□ -0.45
Trim61-201ENSMUST00000078409 Myh1Q5SX40 1942 aa12.25□□□□□ -0.45
Trim61-201ENSMUST00000078409 Znf541Q0GGX2 1363 aa12.25□□□□□ -0.45
Trim61-201ENSMUST00000078409 Gm15262A0A140LIQ5 728 aa12.25□□□□□ -0.45
Trim61-201ENSMUST00000078409 Ttll7A4Q9F0 912 aa12.25□□□□□ -0.45
Trim61-201ENSMUST00000078409 Myl1P05977 188 aa12.25□□□□□ -0.45
Trim61-201ENSMUST00000078409 NyxP83503 476 aa12.25□□□□□ -0.45
Trim61-201ENSMUST00000078409 Bach1P97302 739 aa12.25□□□□□ -0.45
Trim61-201ENSMUST00000078409 Q32P12 615 aa12.25□□□□□ -0.45
Trim61-201ENSMUST00000078409 OsbpQ3B7Z2 805 aa12.25□□□□□ -0.45
Trim61-201ENSMUST00000078409 Kmt5bQ3U8K7 883 aa12.25□□□□□ -0.45
Trim61-201ENSMUST00000078409 Lysmd1Q9D0E3 226 aa12.25□□□□□ -0.45
Trim61-201ENSMUST00000078409 Arih1Q9Z1K5 555 aa12.25□□□□□ -0.45
Trim61-201ENSMUST00000078409 Lrrcc1Q69ZB0 1026 aa12.25□□□□□ -0.45
Trim61-201ENSMUST00000078409 Trak2Q6P9N8 913 aa12.25□□□□□ -0.45
Trim61-201ENSMUST00000078409 Glis3Q6XP49 780 aa12.25□□□□□ -0.45
Trim61-201ENSMUST00000078409 Ttc7aQ8BGB2 858 aa12.25□□□□□ -0.45
Trim61-201ENSMUST00000078409 Skor1Q8BX46 964 aa12.25□□□□□ -0.45
Trim61-201ENSMUST00000078409 Tor1aip2Q8BYU6 502 aa12.25□□□□□ -0.45
Trim61-201ENSMUST00000078409 Tpd52l2Q9CYZ2 220 aaKnown RBP12.25□□□□□ -0.45
Trim61-201ENSMUST00000078409 Telo2Q9DC40 840 aaKnown RBP12.25□□□□□ -0.45
Trim61-201ENSMUST00000078409 Plcb2A3KGF7 1181 aa12.24□□□□□ -0.45
Trim61-201ENSMUST00000078409 Ccdc191J3QQ27 883 aa12.24□□□□□ -0.45
Trim61-201ENSMUST00000078409 Pmm1O35621 262 aa12.24□□□□□ -0.45
Trim61-201ENSMUST00000078409 Rps12P63323 132 aaKnown RBP12.24□□□□□ -0.45
Trim61-201ENSMUST00000078409 Ppp4cP97470 307 aa12.24□□□□□ -0.45
Trim61-201ENSMUST00000078409 Rsrp1Q3UC65 298 aa12.24□□□□□ -0.45
Trim61-201ENSMUST00000078409 Chpf2Q3UU43 768 aa12.24□□□□□ -0.45
Trim61-201ENSMUST00000078409 PsapQ61207 557 aaKnown RBP12.24□□□□□ -0.45
Trim61-201ENSMUST00000078409 ChpfQ6IQX7 774 aa12.24□□□□□ -0.45
Trim61-201ENSMUST00000078409 Ankle2Q6P1H6 964 aa12.24□□□□□ -0.45
Trim61-201ENSMUST00000078409 Ube2q1Q7TSS2 422 aa12.24□□□□□ -0.45
Trim61-201ENSMUST00000078409 Ccdc80Q8R2G6 949 aa12.24□□□□□ -0.45
Trim61-201ENSMUST00000078409 Hoxa10P31310 416 aa12.23□□□□□ -0.45
Trim61-201ENSMUST00000078409 Kif22Q3V300 660 aa12.23□□□□□ -0.45
Trim61-201ENSMUST00000078409 Cnot7Q60809 285 aa12.23□□□□□ -0.45
Trim61-201ENSMUST00000078409 Tmem130Q6NXM3 419 aa12.23□□□□□ -0.45
Trim61-201ENSMUST00000078409 Msantd4Q91YU3 345 aa12.23□□□□□ -0.45
Trim61-201ENSMUST00000078409 Ccdc83Q9D4V3 305 aa12.23□□□□□ -0.45
Trim61-201ENSMUST00000078409 Myo3bQ1EG27 1305 aa12.23□□□□□ -0.45
Trim61-201ENSMUST00000078409 BcorQ8CGN4 1759 aa12.23□□□□□ -0.45
Trim61-201ENSMUST00000078409 Apaf1O88879 1249 aa12.23□□□□□ -0.45
Trim61-201ENSMUST00000078409 Nat3P50296 290 aa12.23□□□□□ -0.45
Trim61-201ENSMUST00000078409 Best3Q6H1V1 669 aa12.23□□□□□ -0.45
Trim61-201ENSMUST00000078409 Recql4Q75NR7 1216 aaKnown RBP12.23□□□□□ -0.45
Trim61-201ENSMUST00000078409 Ccdc186Q8C9S4 917 aa12.23□□□□□ -0.45
Trim61-201ENSMUST00000078409 NaspQ99MD9 773 aaKnown RBP12.23□□□□□ -0.45
Trim61-201ENSMUST00000078409 Pbx4Q99NE9 378 aa12.23□□□□□ -0.45
Trim61-201ENSMUST00000078409 Tanc1Q0VGY8 1856 aa12.23□□□□□ -0.45
Trim61-201ENSMUST00000078409 NrapQ80XB4 1728 aa12.22□□□□□ -0.45
Trim61-201ENSMUST00000078409 Psme4Q5SSW2 1843 aa12.22□□□□□ -0.45
Trim61-201ENSMUST00000078409 Birc5O70201 140 aa12.22□□□□□ -0.45
Trim61-201ENSMUST00000078409 Itgb7P26011 806 aa12.22□□□□□ -0.45
Trim61-201ENSMUST00000078409 Phf8Q80TJ7 1023 aa12.22□□□□□ -0.45
Trim61-201ENSMUST00000078409 Gpt2Q8BGT5 522 aa12.22□□□□□ -0.45
Trim61-201ENSMUST00000078409 Ascc2Q91WR3 749 aa12.22□□□□□ -0.45
Trim61-201ENSMUST00000078409 Kif2cQ922S8 721 aa12.22□□□□□ -0.45
Trim61-201ENSMUST00000078409 Slc39a3Q99K24 317 aa12.22□□□□□ -0.45
Trim61-201ENSMUST00000078409 Ino80bQ99PT3 375 aaKnown RBP12.22□□□□□ -0.45
Trim61-201ENSMUST00000078409 Chmp5Q9D7S9 219 aa12.22□□□□□ -0.45
Trim61-201ENSMUST00000078409 Ccdc70Q9D9B0 223 aa12.22□□□□□ -0.45
Trim61-201ENSMUST00000078409 Polr2aP08775 1970 aaKnown RBP12.22□□□□□ -0.45
Trim61-201ENSMUST00000078409 Ank1Q02357 1862 aa12.22□□□□□ -0.45
Trim61-201ENSMUST00000078409 Pibf1E9Q6K3 756 aa12.21□□□□□ -0.45
Trim61-201ENSMUST00000078409 Oas2E9Q9A9 742 aa12.21□□□□□ -0.45
Trim61-201ENSMUST00000078409 Ccdc146E9Q9F7 977 aa12.21□□□□□ -0.45
Trim61-201ENSMUST00000078409 HunkO88866 714 aa12.21□□□□□ -0.45
Trim61-201ENSMUST00000078409 NfixP70257 488 aa12.21□□□□□ -0.45
Trim61-201ENSMUST00000078409 Cdkl5Q3UTQ8 938 aa12.21□□□□□ -0.45
Trim61-201ENSMUST00000078409 Podnl1Q6P3Y9 559 aa12.21□□□□□ -0.45
Trim61-201ENSMUST00000078409 Rexo4Q6PAQ4 432 aaKnown RBP12.21□□□□□ -0.45
Trim61-201ENSMUST00000078409 Pxylp1Q8BHA9 480 aa12.21□□□□□ -0.45
Trim61-201ENSMUST00000078409 Tmem67Q8BR76 992 aa12.21□□□□□ -0.45
Trim61-201ENSMUST00000078409 Slc51aQ8R000 340 aa12.21□□□□□ -0.45
Trim61-201ENSMUST00000078409 Sf3b3Q921M3 1217 aaKnown RBP12.21□□□□□ -0.45
Trim61-201ENSMUST00000078409 Dydc2Q9D3X8 139 aa12.21□□□□□ -0.45
Trim61-201ENSMUST00000078409 Atp11cQ9QZW0 1129 aa12.21□□□□□ -0.45
Trim61-201ENSMUST00000078409 Akap8lQ9R0L7 642 aaKnown RBP12.21□□□□□ -0.45
Trim61-201ENSMUST00000078409 Ldlrad1D3YYZ1 218 aa12.21□□□□□ -0.46
Trim61-201ENSMUST00000078409 Gm21969J3QJZ1 289 aa12.21□□□□□ -0.46
Trim61-201ENSMUST00000078409 Zfp850J3QPC5 689 aa12.21□□□□□ -0.46
Trim61-201ENSMUST00000078409 Krt18P05784 423 aa12.21□□□□□ -0.46
Trim61-201ENSMUST00000078409 Hspa2P17156 633 aa12.21□□□□□ -0.46
Trim61-201ENSMUST00000078409 Ranbp1P34022 203 aaKnown RBP12.21□□□□□ -0.46
Trim61-201ENSMUST00000078409 LeprP48356 1162 aa12.21□□□□□ -0.46
Trim61-201ENSMUST00000078409 L3mbtl2P59178 703 aa12.21□□□□□ -0.46
Trim61-201ENSMUST00000078409 Nxf2Q4ZGD8 691 aa12.21□□□□□ -0.46
Trim61-201ENSMUST00000078409 Zbtb40Q6PCS8 1258 aa12.21□□□□□ -0.46
Trim61-201ENSMUST00000078409 Ankrd24Q80VM7 985 aa12.21□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 35 ms