RNA–Protein interactions for RNA: ENSMUST00000115659.5

Pcdha9-201, Transcript of Protocadherin alpha-9, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha9, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9-201ENSMUST00000115659 Gm6040Q4QY32 63 aa12.23□□□□□ -0.45
Pcdha9-201ENSMUST00000115659 Ighv1-4A0A075B5T4 117 aa12.23□□□□□ -0.45
Pcdha9-201ENSMUST00000115659 Tmem210Q9D2F0 147 aa12.23□□□□□ -0.45
Pcdha9-201ENSMUST00000115659 Ubl5Q9EPV8 73 aa12.23□□□□□ -0.45
Pcdha9-201ENSMUST00000115659 Rnf114Q9ET26 229 aa12.23□□□□□ -0.45
Pcdha9-201ENSMUST00000115659 Smim10l1A0A087WNQ7 89 aa12.23□□□□□ -0.45
Pcdha9-201ENSMUST00000115659 Ly6g5bQ8K1T4 194 aa12.23□□□□□ -0.45
Pcdha9-201ENSMUST00000115659 P01794 123 aa12.22□□□□□ -0.45
Pcdha9-201ENSMUST00000115659 Ighv1-50A0A075B5W1 117 aa12.22□□□□□ -0.45
Pcdha9-201ENSMUST00000115659 P06330 118 aa12.22□□□□□ -0.45
Pcdha9-201ENSMUST00000115659 Klhdc3Q8VEM9 382 aa12.22□□□□□ -0.45
Pcdha9-201ENSMUST00000115659 Igkv4-68A0A0B4J1I7 117 aa12.21□□□□□ -0.45
Pcdha9-201ENSMUST00000115659 Gm15217A2CG07 155 aa12.21□□□□□ -0.45
Pcdha9-201ENSMUST00000115659 Cd24P24807 76 aa12.21□□□□□ -0.45
Pcdha9-201ENSMUST00000115659 CtsbP10605 339 aa12.21□□□□□ -0.45
Pcdha9-201ENSMUST00000115659 Pcdh15Q99PJ1 1943 aa12.21□□□□□ -0.46
Pcdha9-201ENSMUST00000115659 Ighv6-7A0A0A6YWU3 119 aa12.21□□□□□ -0.46
Pcdha9-201ENSMUST00000115659 Znf740Q6NZQ6 180 aa12.21□□□□□ -0.46
Pcdha9-201ENSMUST00000115659 Ndufa3Q9CQ91 84 aa12.2□□□□□ -0.46
Pcdha9-201ENSMUST00000115659 Fam241bQ9D882 120 aa12.2□□□□□ -0.46
Pcdha9-201ENSMUST00000115659 P01739 132 aa12.2□□□□□ -0.46
Pcdha9-201ENSMUST00000115659 Ighv1-77A0A0G2JGS9 117 aa12.2□□□□□ -0.46
Pcdha9-201ENSMUST00000115659 Reg3gO09049 174 aa12.2□□□□□ -0.46
Pcdha9-201ENSMUST00000115659 Gm5941Q497P9 117 aa12.2□□□□□ -0.46
Pcdha9-201ENSMUST00000115659 Dad1P61804 113 aa12.19□□□□□ -0.46
Pcdha9-201ENSMUST00000115659 Cd99Q8VCN6 175 aa12.19□□□□□ -0.46
Pcdha9-201ENSMUST00000115659 Pfn2Q9JJV2 140 aa12.19□□□□□ -0.46
Pcdha9-201ENSMUST00000115659 Cox7cP17665 63 aa12.19□□□□□ -0.46
Pcdha9-201ENSMUST00000115659 Tmem263Q9DAM7 115 aa12.19□□□□□ -0.46
Pcdha9-201ENSMUST00000115659 P04943 107 aa12.19□□□□□ -0.46
Pcdha9-201ENSMUST00000115659 Gatd1Q8BFQ8 220 aa12.19□□□□□ -0.46
Pcdha9-201ENSMUST00000115659 Prdm6Q3UZD5 596 aa12.19□□□□□ -0.46
Pcdha9-201ENSMUST00000115659 Gm9961Q8BNV2 113 aa12.19□□□□□ -0.46
Pcdha9-201ENSMUST00000115659 Gm9513B3GLJ6 99 aa12.18□□□□□ -0.46
Pcdha9-201ENSMUST00000115659 Gp9O88186 177 aa12.18□□□□□ -0.46
Pcdha9-201ENSMUST00000115659 Sp5Q9JHX2 398 aa12.18□□□□□ -0.46
Pcdha9-201ENSMUST00000115659 Reg3dQ9QUS9 175 aa12.18□□□□□ -0.46
Pcdha9-201ENSMUST00000115659 Pet100P0DJE0 76 aa12.18□□□□□ -0.46
Pcdha9-201ENSMUST00000115659 Mrps12O35680 139 aa12.18□□□□□ -0.46
Pcdha9-201ENSMUST00000115659 Rpl32P62911 135 aaKnown RBP12.18□□□□□ -0.46
Pcdha9-201ENSMUST00000115659 Trbv14A0A140T8L9 115 aa12.17□□□□□ -0.46
Pcdha9-201ENSMUST00000115659 Wfdc2Q9DAU7 174 aa12.17□□□□□ -0.46
Pcdha9-201ENSMUST00000115659 Gm19684G3UZ45 117 aa12.17□□□□□ -0.46
Pcdha9-201ENSMUST00000115659 Clec4b2Q67DU8 208 aa12.17□□□□□ -0.46
Pcdha9-201ENSMUST00000115659 MyofQ69ZN7 2048 aaKnown RBP12.17□□□□□ -0.46
Pcdha9-201ENSMUST00000115659 Lgals4Q8K419 326 aa12.17□□□□□ -0.46
Pcdha9-201ENSMUST00000115659 Sigmar1O55242 223 aa12.17□□□□□ -0.46
Pcdha9-201ENSMUST00000115659 MylkQ6PDN3 1941 aaKnown RBP12.16□□□□□ -0.46
Pcdha9-201ENSMUST00000115659 Plscr4P58196 326 aa12.16□□□□□ -0.46
Pcdha9-201ENSMUST00000115659 Ncor1Q60974 2453 aa12.16□□□□□ -0.46
Pcdha9-201ENSMUST00000115659 Trav14d-3-dv8A0A075B619 120 aa12.16□□□□□ -0.46
Pcdha9-201ENSMUST00000115659 Ighv1-52A0A0A6YXC3 117 aa12.16□□□□□ -0.46
Pcdha9-201ENSMUST00000115659 Igkv2-137A0A0B4J1H6 120 aa12.16□□□□□ -0.46
Pcdha9-201ENSMUST00000115659 E030018B13RikJ3QMS9 113 aa12.16□□□□□ -0.46
Pcdha9-201ENSMUST00000115659 E130218I03RikA0A0U1RNU5 63 aa12.15□□□□□ -0.46
Pcdha9-201ENSMUST00000115659 Lyrm9Q3UN90 78 aa12.15□□□□□ -0.46
Pcdha9-201ENSMUST00000115659 Greb1Q3UHK3 1954 aa12.15□□□□□ -0.46
Pcdha9-201ENSMUST00000115659 P01750 117 aa12.15□□□□□ -0.46
Pcdha9-201ENSMUST00000115659 Igkv8-16A0A0G2JDG9 121 aa12.15□□□□□ -0.46
Pcdha9-201ENSMUST00000115659 Igkv4-61A0A0G2JH00 117 aa12.15□□□□□ -0.46
Pcdha9-201ENSMUST00000115659 Inafm2A0A1L1STD6 152 aa12.15□□□□□ -0.46
Pcdha9-201ENSMUST00000115659 GfyJ3KML8 504 aa12.15□□□□□ -0.46
Pcdha9-201ENSMUST00000115659 P01756 117 aa12.15□□□□□ -0.46
Pcdha9-201ENSMUST00000115659 P01757 117 aa12.15□□□□□ -0.46
Pcdha9-201ENSMUST00000115659 Gm9936Q8C864 160 aa12.15□□□□□ -0.46
Pcdha9-201ENSMUST00000115659 Olfr311Q5NC59 308 aa12.15□□□□□ -0.46
Pcdha9-201ENSMUST00000115659 Bex1Q9R224 128 aa12.15□□□□□ -0.46
Pcdha9-201ENSMUST00000115659 Igkv8-34A0A0G2JDU0 121 aa12.14□□□□□ -0.47
Pcdha9-201ENSMUST00000115659 PkigO70139 76 aa12.14□□□□□ -0.47
Pcdha9-201ENSMUST00000115659 Igkv4-59A0A0B4J1I8 117 aa12.14□□□□□ -0.47
Pcdha9-201ENSMUST00000115659 Ccl21aP84444 133 aa12.14□□□□□ -0.47
Pcdha9-201ENSMUST00000115659 Ccl21bP86792 133 aa12.14□□□□□ -0.47
Pcdha9-201ENSMUST00000115659 Ccl21cP86793 133 aa12.14□□□□□ -0.47
Pcdha9-201ENSMUST00000115659 Dand5Q76LW6 185 aa12.14□□□□□ -0.47
Pcdha9-201ENSMUST00000115659 Ccl24Q9JKC0 119 aa12.14□□□□□ -0.47
Pcdha9-201ENSMUST00000115659 Prpf8Q99PV0 2335 aaKnown RBP12.14□□□□□ -0.47
Pcdha9-201ENSMUST00000115659 P04944 107 aa12.14□□□□□ -0.47
Pcdha9-201ENSMUST00000115659 NpsP0C0P8 89 aa12.14□□□□□ -0.47
Pcdha9-201ENSMUST00000115659 Tm2d1Q99MB3 208 aa12.13□□□□□ -0.47
Pcdha9-201ENSMUST00000115659 Gm15080A2BI02 449 aa12.13□□□□□ -0.47
Pcdha9-201ENSMUST00000115659 BB014433Q8C5R5 389 aa12.13□□□□□ -0.47
Pcdha9-201ENSMUST00000115659 Sec16aA2AIX1 2377 aa12.13□□□□□ -0.47
Pcdha9-201ENSMUST00000115659 NpbQ8K4P1 119 aa12.13□□□□□ -0.47
Pcdha9-201ENSMUST00000115659 Mrpl55Q9CZ83 127 aa12.13□□□□□ -0.47
Pcdha9-201ENSMUST00000115659 Nxph4G3X9N5 304 aa12.13□□□□□ -0.47
Pcdha9-201ENSMUST00000115659 Runx1Q03347 451 aa12.13□□□□□ -0.47
Pcdha9-201ENSMUST00000115659 Crlf1Q9JM58 425 aa12.13□□□□□ -0.47
Pcdha9-201ENSMUST00000115659 Sslp1Q3UN54 99 aa12.11□□□□□ -0.47
Pcdha9-201ENSMUST00000115659 4930415O20RikQ8CDT5 131 aa12.11□□□□□ -0.47
Pcdha9-201ENSMUST00000115659 Bub3Q9WVA3 326 aa12.11□□□□□ -0.47
Pcdha9-201ENSMUST00000115659 Trav9d-4A0A0G2JG37 103 aa12.11□□□□□ -0.47
Pcdha9-201ENSMUST00000115659 Ndufa12Q7TMF3 145 aaKnown RBP12.11□□□□□ -0.47
Pcdha9-201ENSMUST00000115659 Trav4d-3A0A075B625 110 aa12.11□□□□□ -0.47
Pcdha9-201ENSMUST00000115659 A230072I06RikQ3UUJ8 172 aa12.11□□□□□ -0.47
Pcdha9-201ENSMUST00000115659 1500011B03RikQ3TTH7 73 aa12.11□□□□□ -0.47
Pcdha9-201ENSMUST00000115659 Mapk1ip1lQ8BH93 242 aa12.11□□□□□ -0.47
Pcdha9-201ENSMUST00000115659 Chchd5Q9CQP3 110 aa12.11□□□□□ -0.47
Pcdha9-201ENSMUST00000115659 Nckap5E9QAE1 1909 aa12.11□□□□□ -0.47
Pcdha9-201ENSMUST00000115659 FancmQ8BGE5 2021 aa12.1□□□□□ -0.47
Pcdha9-201ENSMUST00000115659 Mlst8Q9DCJ1 326 aa12.1□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 124.9 ms