RNA–Protein interactions for RNA: ENST00000640657.1

HNRNPU-230, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 4,323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-230ENST00000640657 LCE4AQ5TA78 99 aa1.93□□□□□ -2.1
HNRNPU-230ENST00000640657 KRTAP19-8Q3LI54 63 aa1.93□□□□□ -2.1
HNRNPU-230ENST00000640657 LCE3CQ5T5A8 94 aa1.92□□□□□ -2.1
HNRNPU-230ENST00000640657 MT2AP02795 61 aa1.9□□□□□ -2.11
HNRNPU-230ENST00000640657 MT1HP80294 61 aa1.87□□□□□ -2.11
HNRNPU-230ENST00000640657 KRTAP19-2Q3LHN2 52 aa1.87□□□□□ -2.11
HNRNPU-230ENST00000640657 MT1FP04733 61 aa1.86□□□□□ -2.11
HNRNPU-230ENST00000640657 KRTAP19-5Q3LI72 72 aa1.85□□□□□ -2.11
HNRNPU-230ENST00000640657 KRTAP10-5P60370 271 aa1.83□□□□□ -2.12
HNRNPU-230ENST00000640657 MT1XP80297 61 aa1.83□□□□□ -2.12
HNRNPU-230ENST00000640657 KRTAP6-3Q3LI67 103 aa1.82□□□□□ -2.12
HNRNPU-230ENST00000640657 KMT2DO14686 5537 aa1.82□□□□□ -2.12
HNRNPU-230ENST00000640657 KRTAP20-1Q3LI63 56 aa1.8□□□□□ -2.12
HNRNPU-230ENST00000640657 SSPOA2VEC9 5147 aa1.8□□□□□ -2.12
HNRNPU-230ENST00000640657 MT1BP07438 61 aa1.8□□□□□ -2.12
HNRNPU-230ENST00000640657 KRTAP10-7P60409 375 aaPredicted RBP1.8□□□□□ -2.12
HNRNPU-230ENST00000640657 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.77□□□□□ -2.13
HNRNPU-230ENST00000640657 KRTAP2-3P0C7H8 128 aa1.72□□□□□ -2.13
HNRNPU-230ENST00000640657 KRTAP2-4Q9BYR9 128 aa1.72□□□□□ -2.13
HNRNPU-230ENST00000640657 KRTAP2-1Q9BYU5 128 aa1.72□□□□□ -2.13
HNRNPU-230ENST00000640657 KRTAP12-4P60329 112 aa1.7□□□□□ -2.14
HNRNPU-230ENST00000640657 DSTQ03001 7570 aaKnown RBP1.69□□□□□ -2.14
HNRNPU-230ENST00000640657 SYNE2Q8WXH0 6885 aaKnown RBP1.69□□□□□ -2.14
HNRNPU-230ENST00000640657 MACF1Q9UPN3 7388 aaKnown RBP1.67□□□□□ -2.14
HNRNPU-230ENST00000640657 MT1LQ93083 61 aa1.67□□□□□ -2.14
HNRNPU-230ENST00000640657 MUC12Q9UKN1 5478 aa1.66□□□□□ -2.14
HNRNPU-230ENST00000640657 FCGBPQ9Y6R7 5405 aaPredicted RBP1.66□□□□□ -2.14
HNRNPU-230ENST00000640657 MT1EP04732 61 aa1.65□□□□□ -2.15
HNRNPU-230ENST00000640657 NEBP20929 6669 aa1.64□□□□□ -2.15
HNRNPU-230ENST00000640657 MT1GP13640 62 aa1.63□□□□□ -2.15
HNRNPU-230ENST00000640657 KRTAP2-2Q9BYT5 123 aa1.62□□□□□ -2.15
HNRNPU-230ENST00000640657 MDN1Q9NU22 5596 aa1.62□□□□□ -2.15
HNRNPU-230ENST00000640657 OBSCNQ5VST9 7968 aa1.61□□□□□ -2.15
HNRNPU-230ENST00000640657 GPR98Q8WXG9 6306 aa1.6□□□□□ -2.15
HNRNPU-230ENST00000640657 LCE3EQ5T5B0 92 aa1.6□□□□□ -2.15
HNRNPU-230ENST00000640657 LCE3DQ9BYE3 92 aa1.59□□□□□ -2.16
HNRNPU-230ENST00000640657 KRTAP19-6Q3LI70 58 aa1.59□□□□□ -2.16
HNRNPU-230ENST00000640657 KRTAP19-7Q3SYF9 63 aa1.58□□□□□ -2.16
HNRNPU-230ENST00000640657 KRTAP9-6A8MVA2 160 aa1.57□□□□□ -2.16
HNRNPU-230ENST00000640657 KRTAP19-3Q7Z4W3 81 aa1.57□□□□□ -2.16
HNRNPU-230ENST00000640657 MT1AP04731 61 aa1.54□□□□□ -2.16
HNRNPU-230ENST00000640657 KRTAP5-9P26371 169 aa1.54□□□□□ -2.16
HNRNPU-230ENST00000640657 MT1MQ8N339 61 aa1.53□□□□□ -2.16
HNRNPU-230ENST00000640657 KRTAP5-7Q6L8G8 165 aa1.52□□□□□ -2.17
HNRNPU-230ENST00000640657 SPRR2FQ96RM1 72 aa1.52□□□□□ -2.17
HNRNPU-230ENST00000640657 SYNE1Q8NF91 8797 aaKnown RBP1.51□□□□□ -2.17
HNRNPU-230ENST00000640657 KRTAP5-11Q6L8G4 156 aa1.51□□□□□ -2.17
HNRNPU-230ENST00000640657 PRM1P04553 51 aa1.49□□□□□ -2.17
HNRNPU-230ENST00000640657 LCE1AQ5T7P2 110 aa1.48□□□□□ -2.17
HNRNPU-230ENST00000640657 KRTAP5-4Q6L8H1 288 aa1.45□□□□□ -2.18
HNRNPU-230ENST00000640657 AHNAKQ09666 5890 aaKnown RBP1.45□□□□□ -2.18
HNRNPU-230ENST00000640657 KRTAP4-3Q9BYR4 195 aa1.43□□□□□ -2.18
HNRNPU-230ENST00000640657 MT3P25713 68 aa1.43□□□□□ -2.18
HNRNPU-230ENST00000640657 SPRR2AP35326 72 aa1.41□□□□□ -2.18
HNRNPU-230ENST00000640657 KRTAP5-10Q6L8G5 202 aa1.39□□□□□ -2.19
HNRNPU-230ENST00000640657 SPRR2EP22531 72 aa1.38□□□□□ -2.19
HNRNPU-230ENST00000640657 SPRR2BP35325 72 aa1.38□□□□□ -2.19
HNRNPU-230ENST00000640657 KRTAP5-5Q701N2 237 aaPredicted RBP1.36□□□□□ -2.19
HNRNPU-230ENST00000640657 KRTAP6-2Q3LI66 62 aa1.36□□□□□ -2.19
HNRNPU-230ENST00000640657 KRTAP4-4Q9BYR3 166 aa1.36□□□□□ -2.19
HNRNPU-230ENST00000640657 KRTAP6-1Q3LI64 71 aa1.36□□□□□ -2.19
HNRNPU-230ENST00000640657 LCE1FQ5T754 118 aa1.34□□□□□ -2.19
HNRNPU-230ENST00000640657 KRTAP5-2Q701N4 177 aa1.34□□□□□ -2.19
HNRNPU-230ENST00000640657 SPRR2DP22532 72 aa1.34□□□□□ -2.2
HNRNPU-230ENST00000640657 KRTAP5-1Q6L8H4 278 aa1.33□□□□□ -2.2
HNRNPU-230ENST00000640657 AHNAK2Q8IVF2 5795 aa1.31□□□□□ -2.2
HNRNPU-230ENST00000640657 LCE1EQ5T753 118 aa1.31□□□□□ -2.2
HNRNPU-230ENST00000640657 KRTAP5-8O75690 187 aa1.18□□□□□ -2.22
HNRNPU-230ENST00000640657 LCE1BQ5T7P3 118 aa1.14□□□□□ -2.23
HNRNPU-230ENST00000640657 MUC5ACP98088 5654 aa1.13□□□□□ -2.23
HNRNPU-230ENST00000640657 MT4P47944 62 aa1.12□□□□□ -2.23
HNRNPU-230ENST00000640657 MUC19Q7Z5P9 8384 aa1.03□□□□□ -2.24
HNRNPU-230ENST00000640657 KRTAP20-2Q3LI61 65 aa1.03□□□□□ -2.24
HNRNPU-230ENST00000640657 LCE1CQ5T751 118 aa0.93□□□□□ -2.26
HNRNPU-230ENST00000640657 KRTAP21-1Q3LI58 79 aa0.87□□□□□ -2.27
HNRNPU-230ENST00000640657 KRTAP21-2Q3LI59 83 aa0.8□□□□□ -2.28
HNRNPU-230ENST00000640657 PHGR1C9JFL3 82 aa0.78□□□□□ -2.28
HNRNPU-230ENST00000640657 MUC16Q8WXI7 14507 aa0.57□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 64.9 ms