RNA–Protein interactions for RNA: ENST00000640615.1

HLA-B-258, Transcript of major histocompatibility complex, class I, B, humanhuman

BASIC

Gene HLA-B, Length 240 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-258ENST00000640615 SPRR2AP35326 72 aa3.27□□□□□ -1.89
HLA-B-258ENST00000640615 SPRR2FQ96RM1 72 aa3.27□□□□□ -1.89
HLA-B-258ENST00000640615 KRTAP2-2Q9BYT5 123 aa3.27□□□□□ -1.89
HLA-B-258ENST00000640615 KRTAP2-1Q9BYU5 128 aa3.27□□□□□ -1.89
HLA-B-258ENST00000640615 LCE1AQ5T7P2 110 aa3.26□□□□□ -1.89
HLA-B-258ENST00000640615 KRTAP19-7Q3SYF9 63 aa3.25□□□□□ -1.89
HLA-B-258ENST00000640615 KRTAP12-3P60328 96 aa3.24□□□□□ -1.89
HLA-B-258ENST00000640615 MT1EP04732 61 aa3.21□□□□□ -1.9
HLA-B-258ENST00000640615 SPRR2DP22532 72 aa3.16□□□□□ -1.9
HLA-B-258ENST00000640615 SVIPQ8NHG7 77 aa3.15□□□□□ -1.91
HLA-B-258ENST00000640615 KRTAP15-1Q3LI76 137 aa3.14□□□□□ -1.91
HLA-B-258ENST00000640615 MT1LQ93083 61 aa3.13□□□□□ -1.91
HLA-B-258ENST00000640615 KRTAP19-3Q7Z4W3 81 aa3.12□□□□□ -1.91
HLA-B-258ENST00000640615 LCE3BQ5TA77 95 aa3.11□□□□□ -1.91
HLA-B-258ENST00000640615 MT1GP13640 62 aa3.08□□□□□ -1.92
HLA-B-258ENST00000640615 LCE5AQ5TCM9 118 aa3.07□□□□□ -1.92
HLA-B-258ENST00000640615 KRTAP19-4Q3LI73 84 aa3.04□□□□□ -1.92
HLA-B-258ENST00000640615 MT1MQ8N339 61 aa3.03□□□□□ -1.92
HLA-B-258ENST00000640615 LCE3CQ5T5A8 94 aa3.02□□□□□ -1.93
HLA-B-258ENST00000640615 KRTAP4-7Q9BYR0 210 aa3.02□□□□□ -1.93
HLA-B-258ENST00000640615 GPR98Q8WXG9 6306 aa3.01□□□□□ -1.93
HLA-B-258ENST00000640615 KRTAP4-3Q9BYR4 195 aa2.97□□□□□ -1.93
HLA-B-258ENST00000640615 DSTQ03001 7570 aaKnown RBP2.93□□□□□ -1.94
HLA-B-258ENST00000640615 KRTAP4-9Q9BYQ8 210 aa2.92□□□□□ -1.94
HLA-B-258ENST00000640615 LCE1DQ5T752 114 aa2.87□□□□□ -1.95
HLA-B-258ENST00000640615 LOC100996750A0A140TA64 210 aa2.84□□□□□ -1.95
HLA-B-258ENST00000640615 SPRR5A0A1B0GTR4 108 aa2.84□□□□□ -1.95
HLA-B-258ENST00000640615 LCE4AQ5TA78 99 aa2.84□□□□□ -1.95
HLA-B-258ENST00000640615 KRTAP9-6A8MVA2 160 aa2.82□□□□□ -1.96
HLA-B-258ENST00000640615 HMCN1Q96RW7 5635 aa2.81□□□□□ -1.96
HLA-B-258ENST00000640615 KRTAP5-10Q6L8G5 202 aa2.8□□□□□ -1.96
HLA-B-258ENST00000640615 KRTAP5-4Q6L8H1 288 aa2.79□□□□□ -1.96
HLA-B-258ENST00000640615 AHNAK2Q8IVF2 5795 aa2.78□□□□□ -1.97
HLA-B-258ENST00000640615 MT4P47944 62 aa2.76□□□□□ -1.97
HLA-B-258ENST00000640615 LUZP6Q538Z0 58 aa2.73□□□□□ -1.97
HLA-B-258ENST00000640615 KRTAP5-7Q6L8G8 165 aa2.73□□□□□ -1.97
HLA-B-258ENST00000640615 KRTAP5-5Q701N2 237 aaPredicted RBP2.73□□□□□ -1.97
HLA-B-258ENST00000640615 KRTAP4-6Q9BYQ5 205 aa2.72□□□□□ -1.97
HLA-B-258ENST00000640615 KRTAP5-3Q6L8H2 238 aa2.67□□□□□ -1.98
HLA-B-258ENST00000640615 MT1AP04731 61 aa2.66□□□□□ -1.98
HLA-B-258ENST00000640615 KRTAP6-1Q3LI64 71 aa2.64□□□□□ -1.99
HLA-B-258ENST00000640615 KRTAP20-2Q3LI61 65 aa2.61□□□□□ -1.99
HLA-B-258ENST00000640615 KRTAP12-4P60329 112 aa2.6□□□□□ -1.99
HLA-B-258ENST00000640615 KRTAP9-4Q9BYQ2 154 aa2.55□□□□□ -2
HLA-B-258ENST00000640615 NDUFAF8A1L188 74 aa2.54□□□□□ -2
HLA-B-258ENST00000640615 SYNE1Q8NF91 8797 aaKnown RBP2.48□□□□□ -2.01
HLA-B-258ENST00000640615 KRTAP6-2Q3LI66 62 aa2.46□□□□□ -2.02
HLA-B-258ENST00000640615 MT3P25713 68 aa2.43□□□□□ -2.02
HLA-B-258ENST00000640615 KRTAP5-2Q701N4 177 aa2.42□□□□□ -2.02
HLA-B-258ENST00000640615 KRTAP4-11Q9BYQ6 195 aa2.42□□□□□ -2.02
HLA-B-258ENST00000640615 KRTAP5-8O75690 187 aa2.37□□□□□ -2.03
HLA-B-258ENST00000640615 AHNAKQ09666 5890 aaKnown RBP2.34□□□□□ -2.03
HLA-B-258ENST00000640615 MUC5ACP98088 5654 aa2.34□□□□□ -2.04
HLA-B-258ENST00000640615 MUC5BQ9HC84 5762 aaPredicted RBP2.3□□□□□ -2.04
HLA-B-258ENST00000640615 LCE3DQ9BYE3 92 aa2.25□□□□□ -2.05
HLA-B-258ENST00000640615 KRTAP9-9Q9BYP9 154 aa2.23□□□□□ -2.05
HLA-B-258ENST00000640615 OBSCNQ5VST9 7968 aa2.2□□□□□ -2.06
HLA-B-258ENST00000640615 A0A0A0MQY5 61 aa2.2□□□□□ -2.06
HLA-B-258ENST00000640615 KRTAP5-1Q6L8H4 278 aa2.19□□□□□ -2.06
HLA-B-258ENST00000640615 LCE3EQ5T5B0 92 aa2.17□□□□□ -2.06
HLA-B-258ENST00000640615 LCE1EQ5T753 118 aa2.13□□□□□ -2.07
HLA-B-258ENST00000640615 INE1O15225 51 aa2.09□□□□□ -2.07
HLA-B-258ENST00000640615 LCE1BQ5T7P3 118 aa2.03□□□□□ -2.08
HLA-B-258ENST00000640615 LCE1CQ5T751 118 aa1.98□□□□□ -2.09
HLA-B-258ENST00000640615 KRTAP4-2Q9BYR5 136 aa1.98□□□□□ -2.09
HLA-B-258ENST00000640615 H3BS24 57 aa1.97□□□□□ -2.09
HLA-B-258ENST00000640615 PRM1P04553 51 aa1.83□□□□□ -2.12
HLA-B-258ENST00000640615 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.83□□□□□ -2.12
HLA-B-258ENST00000640615 KRTAP5-11Q6L8G4 156 aa1.76□□□□□ -2.13
HLA-B-258ENST00000640615 KRTAP4-12Q9BQ66 201 aa1.75□□□□□ -2.13
HLA-B-258ENST00000640615 LCE1FQ5T754 118 aa1.73□□□□□ -2.13
HLA-B-258ENST00000640615 KRTAP21-2Q3LI59 83 aa1.72□□□□□ -2.13
HLA-B-258ENST00000640615 PHGR1C9JFL3 82 aa1.59□□□□□ -2.15
HLA-B-258ENST00000640615 KRTAP4-4Q9BYR3 166 aa1.56□□□□□ -2.16
HLA-B-258ENST00000640615 MUC19Q7Z5P9 8384 aa1.37□□□□□ -2.19
HLA-B-258ENST00000640615 KRTAP21-1Q3LI58 79 aa1.23□□□□□ -2.21
HLA-B-258ENST00000640615 MUC16Q8WXI7 14507 aa0.97□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 75.4 ms