RNA–Protein interactions for RNA: ENST00000640414.1

MECP2-226, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5 BASIC

Gene MECP2, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-226ENST00000640414 BRK1Q8WUW1 75 aa4.61□□□□□ -1.67
MECP2-226ENST00000640414 K7ERS5 55 aa4.6□□□□□ -1.67
MECP2-226ENST00000640414 LCE1DQ5T752 114 aa4.6□□□□□ -1.67
MECP2-226ENST00000640414 AHNAK2Q8IVF2 5795 aa4.57□□□□□ -1.68
MECP2-226ENST00000640414 HMCN1Q96RW7 5635 aa4.56□□□□□ -1.68
MECP2-226ENST00000640414 KRTAP10-7P60409 375 aaPredicted RBP4.56□□□□□ -1.68
MECP2-226ENST00000640414 KRTAP5-10Q6L8G5 202 aa4.56□□□□□ -1.68
MECP2-226ENST00000640414 C10orf95Q9H7T3 257 aa4.53□□□□□ -1.68
MECP2-226ENST00000640414 KRTAP10-12P60413 245 aa4.52□□□□□ -1.69
MECP2-226ENST00000640414 KTN1-AS1Q86SY8 53 aa4.5□□□□□ -1.69
MECP2-226ENST00000640414 MT4P47944 62 aa4.48□□□□□ -1.69
MECP2-226ENST00000640414 KRTAP5-7Q6L8G8 165 aa4.45□□□□□ -1.7
MECP2-226ENST00000640414 LCE5AQ5TCM9 118 aa4.44□□□□□ -1.7
MECP2-226ENST00000640414 ROMO1P60602 79 aa4.41□□□□□ -1.7
MECP2-226ENST00000640414 LCE4AQ5TA78 99 aa4.41□□□□□ -1.7
MECP2-226ENST00000640414 TNP1P09430 55 aa4.39□□□□□ -1.71
MECP2-226ENST00000640414 KRTAP25-1Q3LHN0 102 aa4.34□□□□□ -1.71
MECP2-226ENST00000640414 KRTAP19-3Q7Z4W3 81 aa4.34□□□□□ -1.71
MECP2-226ENST00000640414 PRAC1Q96KF2 57 aa4.34□□□□□ -1.71
MECP2-226ENST00000640414 SPRR5A0A1B0GTR4 108 aa4.32□□□□□ -1.72
MECP2-226ENST00000640414 KRTAP5-3Q6L8H2 238 aa4.32□□□□□ -1.72
MECP2-226ENST00000640414 KRTAP4-6Q9BYQ5 205 aa4.3□□□□□ -1.72
MECP2-226ENST00000640414 KRTAP19-7Q3SYF9 63 aa4.28□□□□□ -1.72
MECP2-226ENST00000640414 MT1EP04732 61 aa4.27□□□□□ -1.73
MECP2-226ENST00000640414 LCE3AQ5TA76 89 aa4.25□□□□□ -1.73
MECP2-226ENST00000640414 KRTAP5-4Q6L8H1 288 aa4.24□□□□□ -1.73
MECP2-226ENST00000640414 MT1GP13640 62 aa4.17□□□□□ -1.74
MECP2-226ENST00000640414 KRTAP19-5Q3LI72 72 aa4.16□□□□□ -1.74
MECP2-226ENST00000640414 LUZP6Q538Z0 58 aa4.14□□□□□ -1.75
MECP2-226ENST00000640414 PP632Q6XCG6 107 aa4.13□□□□□ -1.75
MECP2-226ENST00000640414 LOC100996750A0A140TA64 210 aa4.12□□□□□ -1.75
MECP2-226ENST00000640414 MT1MQ8N339 61 aa4.11□□□□□ -1.75
MECP2-226ENST00000640414 KRTAP12-3P60328 96 aa4.09□□□□□ -1.75
MECP2-226ENST00000640414 KRTAP20-2Q3LI61 65 aa4.05□□□□□ -1.76
MECP2-226ENST00000640414 KRTAP4-3Q9BYR4 195 aa4.05□□□□□ -1.76
MECP2-226ENST00000640414 MT1LQ93083 61 aa3.98□□□□□ -1.77
MECP2-226ENST00000640414 AHNAKQ09666 5890 aaKnown RBP3.97□□□□□ -1.77
MECP2-226ENST00000640414 KRTAP15-1Q3LI76 137 aa3.96□□□□□ -1.78
MECP2-226ENST00000640414 MUC5ACP98088 5654 aa3.91□□□□□ -1.78
MECP2-226ENST00000640414 SYNE1Q8NF91 8797 aaKnown RBP3.84□□□□□ -1.79
MECP2-226ENST00000640414 KRTAP19-4Q3LI73 84 aa3.84□□□□□ -1.79
MECP2-226ENST00000640414 KRTAP4-7Q9BYR0 210 aa3.84□□□□□ -1.79
MECP2-226ENST00000640414 KRTAP12-4P60329 112 aa3.83□□□□□ -1.8
MECP2-226ENST00000640414 KRTAP4-11Q9BYQ6 195 aa3.83□□□□□ -1.8
MECP2-226ENST00000640414 KRTAP5-5Q701N2 237 aaPredicted RBP3.82□□□□□ -1.8
MECP2-226ENST00000640414 LCE3CQ5T5A8 94 aa3.81□□□□□ -1.8
MECP2-226ENST00000640414 MUC5BQ9HC84 5762 aaPredicted RBP3.79□□□□□ -1.8
MECP2-226ENST00000640414 NDUFAF8A1L188 74 aa3.79□□□□□ -1.8
MECP2-226ENST00000640414 KRTAP5-8O75690 187 aa3.77□□□□□ -1.81
MECP2-226ENST00000640414 KRTAP4-12Q9BQ66 201 aa3.74□□□□□ -1.81
MECP2-226ENST00000640414 KRTAP9-6A8MVA2 160 aa3.62□□□□□ -1.83
MECP2-226ENST00000640414 KRTAP5-2Q701N4 177 aa3.62□□□□□ -1.83
MECP2-226ENST00000640414 KRTAP9-9Q9BYP9 154 aa3.61□□□□□ -1.83
MECP2-226ENST00000640414 KRTAP9-4Q9BYQ2 154 aa3.57□□□□□ -1.84
MECP2-226ENST00000640414 OBSCNQ5VST9 7968 aa3.5□□□□□ -1.85
MECP2-226ENST00000640414 KRTAP6-1Q3LI64 71 aa3.4□□□□□ -1.87
MECP2-226ENST00000640414 MT1AP04731 61 aa3.37□□□□□ -1.87
MECP2-226ENST00000640414 KRTAP6-2Q3LI66 62 aa3.36□□□□□ -1.87
MECP2-226ENST00000640414 KRTAP5-1Q6L8H4 278 aa3.35□□□□□ -1.87
MECP2-226ENST00000640414 INE1O15225 51 aa3.25□□□□□ -1.89
MECP2-226ENST00000640414 KRTAP4-2Q9BYR5 136 aa3.2□□□□□ -1.9
MECP2-226ENST00000640414 MT3P25713 68 aa3.09□□□□□ -1.91
MECP2-226ENST00000640414 LCE1EQ5T753 118 aa2.98□□□□□ -1.93
MECP2-226ENST00000640414 LCE1BQ5T7P3 118 aa2.87□□□□□ -1.95
MECP2-226ENST00000640414 LCE3DQ9BYE3 92 aa2.83□□□□□ -1.96
MECP2-226ENST00000640414 LCE1CQ5T751 118 aa2.77□□□□□ -1.97
MECP2-226ENST00000640414 LCE3EQ5T5B0 92 aa2.73□□□□□ -1.97
MECP2-226ENST00000640414 LCE1FQ5T754 118 aa2.71□□□□□ -1.98
MECP2-226ENST00000640414 KRTAP5-11Q6L8G4 156 aa2.69□□□□□ -1.98
MECP2-226ENST00000640414 PHGR1C9JFL3 82 aa2.68□□□□□ -1.98
MECP2-226ENST00000640414 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.45□□□□□ -2.02
MECP2-226ENST00000640414 PRM1P04553 51 aa2.29□□□□□ -2.04
MECP2-226ENST00000640414 KRTAP21-2Q3LI59 83 aa2.25□□□□□ -2.05
MECP2-226ENST00000640414 MUC19Q7Z5P9 8384 aa2.23□□□□□ -2.05
MECP2-226ENST00000640414 KRTAP4-4Q9BYR3 166 aa2.16□□□□□ -2.06
MECP2-226ENST00000640414 KRTAP21-1Q3LI58 79 aa2.03□□□□□ -2.08
MECP2-226ENST00000640414 MUC16Q8WXI7 14507 aa1.5□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 99.2 ms