RNA–Protein interactions for RNA: ENST00000639920.1

PAX6-260, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 676 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-260ENST00000639920 PRO0628Q9UI54 55 aa3.64□□□□□ -1.83
PAX6-260ENST00000639920 PP632Q6XCG6 107 aa3.63□□□□□ -1.83
PAX6-260ENST00000639920 H3BS24 57 aa3.62□□□□□ -1.83
PAX6-260ENST00000639920 MT1MQ8N339 61 aa3.62□□□□□ -1.83
PAX6-260ENST00000639920 MIR22HGQ0VDD5 57 aa3.6□□□□□ -1.83
PAX6-260ENST00000639920 A0A0A0MQY5 61 aa3.59□□□□□ -1.83
PAX6-260ENST00000639920 RPS28P62857 69 aaKnown RBP3.58□□□□□ -1.84
PAX6-260ENST00000639920 Q1T7F1 81 aa3.56□□□□□ -1.84
PAX6-260ENST00000639920 PSPHP1O15172 72 aa3.55□□□□□ -1.84
PAX6-260ENST00000639920 KRTAP12-3P60328 96 aa3.54□□□□□ -1.84
PAX6-260ENST00000639920 KRTAP25-1Q3LHN0 102 aa3.52□□□□□ -1.85
PAX6-260ENST00000639920 KRTAP4-9Q9BYQ8 210 aa3.52□□□□□ -1.85
PAX6-260ENST00000639920 KRTAP4-3Q9BYR4 195 aa3.52□□□□□ -1.85
PAX6-260ENST00000639920 K7ERS5 55 aa3.51□□□□□ -1.85
PAX6-260ENST00000639920 LCE4AQ5TA78 99 aa3.48□□□□□ -1.85
PAX6-260ENST00000639920 PMAIP1Q13794 54 aa3.47□□□□□ -1.85
PAX6-260ENST00000639920 LCE1DQ5T752 114 aa3.47□□□□□ -1.85
PAX6-260ENST00000639920 KRTAP4-7Q9BYR0 210 aa3.46□□□□□ -1.86
PAX6-260ENST00000639920 KRTAP5-4Q6L8H1 288 aa3.45□□□□□ -1.86
PAX6-260ENST00000639920 HMCN1Q96RW7 5635 aa3.43□□□□□ -1.86
PAX6-260ENST00000639920 GPR98Q8WXG9 6306 aa3.43□□□□□ -1.86
PAX6-260ENST00000639920 A6NED7 52 aa3.42□□□□□ -1.86
PAX6-260ENST00000639920 MT4P47944 62 aa3.41□□□□□ -1.86
PAX6-260ENST00000639920 KRTAP23-1A1A580 65 aa3.4□□□□□ -1.87
PAX6-260ENST00000639920 KRTAP19-4Q3LI73 84 aa3.36□□□□□ -1.87
PAX6-260ENST00000639920 KRTAP5-5Q701N2 237 aaPredicted RBP3.34□□□□□ -1.87
PAX6-260ENST00000639920 KRTAP4-6Q9BYQ5 205 aa3.34□□□□□ -1.87
PAX6-260ENST00000639920 CDC42SE1Q9NRR8 79 aa3.34□□□□□ -1.87
PAX6-260ENST00000639920 KRTAP15-1Q3LI76 137 aa3.32□□□□□ -1.88
PAX6-260ENST00000639920 ROMO1P60602 79 aa3.29□□□□□ -1.88
PAX6-260ENST00000639920 AHNAK2Q8IVF2 5795 aa3.28□□□□□ -1.88
PAX6-260ENST00000639920 LOC100996750A0A140TA64 210 aa3.27□□□□□ -1.89
PAX6-260ENST00000639920 LCE3CQ5T5A8 94 aa3.26□□□□□ -1.89
PAX6-260ENST00000639920 KTN1-AS1Q86SY8 53 aa3.25□□□□□ -1.89
PAX6-260ENST00000639920 SYNE1Q8NF91 8797 aaKnown RBP3.24□□□□□ -1.89
PAX6-260ENST00000639920 SPRR5A0A1B0GTR4 108 aa3.23□□□□□ -1.89
PAX6-260ENST00000639920 KRTAP20-2Q3LI61 65 aa3.23□□□□□ -1.89
PAX6-260ENST00000639920 KRTAP5-10Q6L8G5 202 aa3.21□□□□□ -1.9
PAX6-260ENST00000639920 BRK1Q8WUW1 75 aa3.21□□□□□ -1.9
PAX6-260ENST00000639920 KRTAP12-4P60329 112 aa3.2□□□□□ -1.9
PAX6-260ENST00000639920 KRTAP5-3Q6L8H2 238 aa3.15□□□□□ -1.91
PAX6-260ENST00000639920 MT1AP04731 61 aa3.11□□□□□ -1.91
PAX6-260ENST00000639920 KRTAP9-6A8MVA2 160 aa3.1□□□□□ -1.91
PAX6-260ENST00000639920 KRTAP6-1Q3LI64 71 aa3.08□□□□□ -1.92
PAX6-260ENST00000639920 KRTAP5-7Q6L8G8 165 aa3.08□□□□□ -1.92
PAX6-260ENST00000639920 KRTAP5-2Q701N4 177 aa3.03□□□□□ -1.92
PAX6-260ENST00000639920 PRAC1Q96KF2 57 aa2.99□□□□□ -1.93
PAX6-260ENST00000639920 KRTAP9-4Q9BYQ2 154 aa2.98□□□□□ -1.93
PAX6-260ENST00000639920 KRTAP4-11Q9BYQ6 195 aa2.94□□□□□ -1.94
PAX6-260ENST00000639920 KRTAP6-2Q3LI66 62 aa2.93□□□□□ -1.94
PAX6-260ENST00000639920 LUZP6Q538Z0 58 aa2.93□□□□□ -1.94
PAX6-260ENST00000639920 KRTAP5-8O75690 187 aa2.85□□□□□ -1.95
PAX6-260ENST00000639920 MT3P25713 68 aa2.83□□□□□ -1.96
PAX6-260ENST00000639920 OBSCNQ5VST9 7968 aa2.83□□□□□ -1.96
PAX6-260ENST00000639920 KRTAP5-1Q6L8H4 278 aa2.71□□□□□ -1.98
PAX6-260ENST00000639920 MUC5BQ9HC84 5762 aaPredicted RBP2.71□□□□□ -1.98
PAX6-260ENST00000639920 NDUFAF8A1L188 74 aa2.7□□□□□ -1.98
PAX6-260ENST00000639920 MUC5ACP98088 5654 aa2.7□□□□□ -1.98
PAX6-260ENST00000639920 AHNAKQ09666 5890 aaKnown RBP2.69□□□□□ -1.98
PAX6-260ENST00000639920 KRTAP9-9Q9BYP9 154 aa2.67□□□□□ -1.98
PAX6-260ENST00000639920 LCE1EQ5T753 118 aa2.6□□□□□ -1.99
PAX6-260ENST00000639920 KRTAP4-2Q9BYR5 136 aa2.46□□□□□ -2.02
PAX6-260ENST00000639920 LCE1CQ5T751 118 aa2.42□□□□□ -2.02
PAX6-260ENST00000639920 LCE1BQ5T7P3 118 aa2.42□□□□□ -2.02
PAX6-260ENST00000639920 INE1O15225 51 aa2.39□□□□□ -2.03
PAX6-260ENST00000639920 LCE3DQ9BYE3 92 aa2.35□□□□□ -2.03
PAX6-260ENST00000639920 LCE3EQ5T5B0 92 aa2.22□□□□□ -2.05
PAX6-260ENST00000639920 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.22□□□□□ -2.05
PAX6-260ENST00000639920 KRTAP5-11Q6L8G4 156 aa2.19□□□□□ -2.06
PAX6-260ENST00000639920 KRTAP4-12Q9BQ66 201 aa2.18□□□□□ -2.06
PAX6-260ENST00000639920 LCE1FQ5T754 118 aa2.11□□□□□ -2.07
PAX6-260ENST00000639920 KRTAP21-2Q3LI59 83 aa2.04□□□□□ -2.08
PAX6-260ENST00000639920 PHGR1C9JFL3 82 aa1.89□□□□□ -2.11
PAX6-260ENST00000639920 KRTAP4-4Q9BYR3 166 aa1.83□□□□□ -2.12
PAX6-260ENST00000639920 MUC19Q7Z5P9 8384 aa1.75□□□□□ -2.13
PAX6-260ENST00000639920 PRM1P04553 51 aa1.68□□□□□ -2.14
PAX6-260ENST00000639920 KRTAP21-1Q3LI58 79 aa1.41□□□□□ -2.18
PAX6-260ENST00000639920 MUC16Q8WXI7 14507 aa1.26□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 103.2 ms