RNA–Protein interactions for RNA: ENST00000638913.1

PAX6-244, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,390 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-244ENST00000638913 KRTAP5-3Q6L8H2 238 aa3.88□□□□□ -1.79
PAX6-244ENST00000638913 KRTAP19-5Q3LI72 72 aa3.87□□□□□ -1.79
PAX6-244ENST00000638913 KRTAP4-11Q9BYQ6 195 aa3.8□□□□□ -1.8
PAX6-244ENST00000638913 SSPOA2VEC9 5147 aa3.75□□□□□ -1.81
PAX6-244ENST00000638913 LCE3CQ5T5A8 94 aa3.75□□□□□ -1.81
PAX6-244ENST00000638913 FSIP2Q5CZC0 6907 aa3.75□□□□□ -1.81
PAX6-244ENST00000638913 KRTAP9-6A8MVA2 160 aa3.68□□□□□ -1.82
PAX6-244ENST00000638913 KRTAP19-7Q3SYF9 63 aa3.65□□□□□ -1.83
PAX6-244ENST00000638913 INE1O15225 51 aa3.63□□□□□ -1.83
PAX6-244ENST00000638913 KRTAP19-6Q3LI70 58 aa3.55□□□□□ -1.84
PAX6-244ENST00000638913 MT1EP04732 61 aa3.54□□□□□ -1.84
PAX6-244ENST00000638913 MT1LQ93083 61 aa3.54□□□□□ -1.84
PAX6-244ENST00000638913 FCGBPQ9Y6R7 5405 aaPredicted RBP3.53□□□□□ -1.84
PAX6-244ENST00000638913 MUC12Q9UKN1 5478 aa3.48□□□□□ -1.85
PAX6-244ENST00000638913 KRTAP4-3Q9BYR4 195 aa3.47□□□□□ -1.85
PAX6-244ENST00000638913 LCE5AQ5TCM9 118 aa3.46□□□□□ -1.86
PAX6-244ENST00000638913 KRTAP2-3P0C7H8 128 aa3.46□□□□□ -1.86
PAX6-244ENST00000638913 KRTAP2-4Q9BYR9 128 aa3.46□□□□□ -1.86
PAX6-244ENST00000638913 KRTAP2-1Q9BYU5 128 aa3.46□□□□□ -1.86
PAX6-244ENST00000638913 CRCT1Q9UGL9 99 aa3.4□□□□□ -1.86
PAX6-244ENST00000638913 MT1GP13640 62 aa3.39□□□□□ -1.87
PAX6-244ENST00000638913 LCE4AQ5TA78 99 aa3.39□□□□□ -1.87
PAX6-244ENST00000638913 DSTQ03001 7570 aaKnown RBP3.38□□□□□ -1.87
PAX6-244ENST00000638913 MACF1Q9UPN3 7388 aaKnown RBP3.34□□□□□ -1.87
PAX6-244ENST00000638913 KRTAP19-4Q3LI73 84 aa3.32□□□□□ -1.88
PAX6-244ENST00000638913 MT1MQ8N339 61 aa3.31□□□□□ -1.88
PAX6-244ENST00000638913 KRTAP19-3Q7Z4W3 81 aa3.29□□□□□ -1.88
PAX6-244ENST00000638913 SYNE2Q8WXH0 6885 aaKnown RBP3.26□□□□□ -1.89
PAX6-244ENST00000638913 SPRR2FQ96RM1 72 aa3.24□□□□□ -1.89
PAX6-244ENST00000638913 KRTAP9-7A8MTY7 169 aa3.23□□□□□ -1.89
PAX6-244ENST00000638913 MDN1Q9NU22 5596 aa3.19□□□□□ -1.9
PAX6-244ENST00000638913 SYNE1Q8NF91 8797 aaKnown RBP3.15□□□□□ -1.9
PAX6-244ENST00000638913 KRTAP12-4P60329 112 aa3.15□□□□□ -1.91
PAX6-244ENST00000638913 KRTAP5-9P26371 169 aa3.09□□□□□ -1.92
PAX6-244ENST00000638913 LCE1AQ5T7P2 110 aa3.06□□□□□ -1.92
PAX6-244ENST00000638913 KRTAP6-1Q3LI64 71 aa3.05□□□□□ -1.92
PAX6-244ENST00000638913 HMCN1Q96RW7 5635 aa3.01□□□□□ -1.93
PAX6-244ENST00000638913 SPRR2EP22531 72 aa2.98□□□□□ -1.93
PAX6-244ENST00000638913 SPRR2BP35325 72 aa2.98□□□□□ -1.93
PAX6-244ENST00000638913 SPRR2AP35326 72 aa2.98□□□□□ -1.93
PAX6-244ENST00000638913 MT1AP04731 61 aa2.93□□□□□ -1.94
PAX6-244ENST00000638913 OBSCNQ5VST9 7968 aa2.92□□□□□ -1.94
PAX6-244ENST00000638913 KRTAP6-3Q3LI67 103 aa2.92□□□□□ -1.94
PAX6-244ENST00000638913 LCE3DQ9BYE3 92 aa2.9□□□□□ -1.94
PAX6-244ENST00000638913 LCE1FQ5T754 118 aa2.89□□□□□ -1.95
PAX6-244ENST00000638913 KRTAP5-5Q701N2 237 aaPredicted RBP2.88□□□□□ -1.95
PAX6-244ENST00000638913 SPRR2DP22532 72 aa2.86□□□□□ -1.95
PAX6-244ENST00000638913 LCE3EQ5T5B0 92 aa2.86□□□□□ -1.95
PAX6-244ENST00000638913 KRTAP2-2Q9BYT5 123 aa2.85□□□□□ -1.95
PAX6-244ENST00000638913 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.83□□□□□ -1.96
PAX6-244ENST00000638913 NEBP20929 6669 aa2.8□□□□□ -1.96
PAX6-244ENST00000638913 PRM1P04553 51 aa2.8□□□□□ -1.96
PAX6-244ENST00000638913 KRTAP6-2Q3LI66 62 aa2.74□□□□□ -1.97
PAX6-244ENST00000638913 KRTAP20-1Q3LI63 56 aa2.69□□□□□ -1.98
PAX6-244ENST00000638913 MT3P25713 68 aa2.65□□□□□ -1.99
PAX6-244ENST00000638913 KRTAP5-4Q6L8H1 288 aa2.63□□□□□ -1.99
PAX6-244ENST00000638913 MT4P47944 62 aa2.54□□□□□ -2
PAX6-244ENST00000638913 LCE1EQ5T753 118 aa2.52□□□□□ -2.01
PAX6-244ENST00000638913 KRTAP5-11Q6L8G4 156 aa2.52□□□□□ -2.01
PAX6-244ENST00000638913 KRTAP20-2Q3LI61 65 aa2.47□□□□□ -2.01
PAX6-244ENST00000638913 GPR98Q8WXG9 6306 aa2.45□□□□□ -2.02
PAX6-244ENST00000638913 KRTAP5-2Q701N4 177 aa2.42□□□□□ -2.02
PAX6-244ENST00000638913 KRTAP5-1Q6L8H4 278 aa2.37□□□□□ -2.03
PAX6-244ENST00000638913 MUC5BQ9HC84 5762 aaPredicted RBP2.33□□□□□ -2.04
PAX6-244ENST00000638913 KRTAP4-4Q9BYR3 166 aa2.32□□□□□ -2.04
PAX6-244ENST00000638913 MUC5ACP98088 5654 aa2.31□□□□□ -2.04
PAX6-244ENST00000638913 LCE1BQ5T7P3 118 aa2.24□□□□□ -2.05
PAX6-244ENST00000638913 AHNAK2Q8IVF2 5795 aa2.14□□□□□ -2.07
PAX6-244ENST00000638913 KRTAP5-10Q6L8G5 202 aa2.1□□□□□ -2.07
PAX6-244ENST00000638913 KRTAP5-8O75690 187 aa2.03□□□□□ -2.08
PAX6-244ENST00000638913 KRTAP5-7Q6L8G8 165 aa2□□□□□ -2.09
PAX6-244ENST00000638913 LCE1CQ5T751 118 aa2□□□□□ -2.09
PAX6-244ENST00000638913 KRTAP21-2Q3LI59 83 aa1.93□□□□□ -2.1
PAX6-244ENST00000638913 AHNAKQ09666 5890 aaKnown RBP1.92□□□□□ -2.1
PAX6-244ENST00000638913 MUC19Q7Z5P9 8384 aa1.84□□□□□ -2.11
PAX6-244ENST00000638913 KRTAP21-1Q3LI58 79 aa1.69□□□□□ -2.14
PAX6-244ENST00000638913 PHGR1C9JFL3 82 aa1.52□□□□□ -2.17
PAX6-244ENST00000638913 MUC16Q8WXI7 14507 aa1.02□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 71.4 ms