RNA–Protein interactions for RNA: ENST00000638826.1

SMG7-216, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG7, Length 219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-216ENST00000638826 C10orf95Q9H7T3 257 aa2.86□□□□□ -1.95
SMG7-216ENST00000638826 TNP1P09430 55 aa2.84□□□□□ -1.95
SMG7-216ENST00000638826 LCE3AQ5TA76 89 aa2.84□□□□□ -1.95
SMG7-216ENST00000638826 KRTAP4-11Q9BYQ6 195 aa2.84□□□□□ -1.95
SMG7-216ENST00000638826 SMIM26A0A096LP01 95 aa2.83□□□□□ -1.96
SMG7-216ENST00000638826 SERP2Q8N6R1 65 aa2.81□□□□□ -1.96
SMG7-216ENST00000638826 SPRR5A0A1B0GTR4 108 aa2.8□□□□□ -1.96
SMG7-216ENST00000638826 K7ERU9 68 aa2.8□□□□□ -1.96
SMG7-216ENST00000638826 KRTAP20-2Q3LI61 65 aa2.8□□□□□ -1.96
SMG7-216ENST00000638826 KRTAP12-4P60329 112 aa2.78□□□□□ -1.96
SMG7-216ENST00000638826 KRTAP19-4Q3LI73 84 aa2.78□□□□□ -1.96
SMG7-216ENST00000638826 KRTAP12-3P60328 96 aa2.76□□□□□ -1.97
SMG7-216ENST00000638826 A0A1B0GU69 56 aa2.75□□□□□ -1.97
SMG7-216ENST00000638826 KRTAP5-5Q701N2 237 aaPredicted RBP2.74□□□□□ -1.97
SMG7-216ENST00000638826 A8MU10 97 aa2.73□□□□□ -1.97
SMG7-216ENST00000638826 SYNE1Q8NF91 8797 aaKnown RBP2.7□□□□□ -1.98
SMG7-216ENST00000638826 COX7CP15954 63 aa2.66□□□□□ -1.98
SMG7-216ENST00000638826 H7BZZ5 65 aa2.65□□□□□ -1.99
SMG7-216ENST00000638826 PRR15LQ9BU68 103 aa2.65□□□□□ -1.99
SMG7-216ENST00000638826 AHNAKQ09666 5890 aaKnown RBP2.6□□□□□ -1.99
SMG7-216ENST00000638826 KRTAP25-1Q3LHN0 102 aa2.59□□□□□ -1.99
SMG7-216ENST00000638826 MUC5ACP98088 5654 aa2.57□□□□□ -2
SMG7-216ENST00000638826 MUC5BQ9HC84 5762 aaPredicted RBP2.56□□□□□ -2
SMG7-216ENST00000638826 KRTAP5-2Q701N4 177 aa2.56□□□□□ -2
SMG7-216ENST00000638826 UQCR11O14957 56 aa2.53□□□□□ -2
SMG7-216ENST00000638826 LINC01558Q9Y6Z2 57 aa2.52□□□□□ -2.01
SMG7-216ENST00000638826 KRTAP5-8O75690 187 aa2.51□□□□□ -2.01
SMG7-216ENST00000638826 MT1AP04731 61 aa2.51□□□□□ -2.01
SMG7-216ENST00000638826 KRTAP15-1Q3LI76 137 aa2.51□□□□□ -2.01
SMG7-216ENST00000638826 LCE3CQ5T5A8 94 aa2.51□□□□□ -2.01
SMG7-216ENST00000638826 KRTAP23-1A1A580 65 aa2.49□□□□□ -2.01
SMG7-216ENST00000638826 K7ERS5 55 aa2.49□□□□□ -2.01
SMG7-216ENST00000638826 ATP5EP56381 51 aaPredicted RBP2.49□□□□□ -2.01
SMG7-216ENST00000638826 KRTAP6-1Q3LI64 71 aa2.48□□□□□ -2.01
SMG7-216ENST00000638826 ANAPC13Q9BS18 74 aa2.46□□□□□ -2.02
SMG7-216ENST00000638826 MIR22HGQ0VDD5 57 aa2.44□□□□□ -2.02
SMG7-216ENST00000638826 OBSCNQ5VST9 7968 aa2.43□□□□□ -2.02
SMG7-216ENST00000638826 KRTAP6-2Q3LI66 62 aa2.42□□□□□ -2.02
SMG7-216ENST00000638826 H3BS24 57 aa2.4□□□□□ -2.03
SMG7-216ENST00000638826 CCDC179H3BU77 68 aa2.37□□□□□ -2.03
SMG7-216ENST00000638826 MT3P25713 68 aa2.33□□□□□ -2.04
SMG7-216ENST00000638826 TMEM258P61165 79 aa2.33□□□□□ -2.04
SMG7-216ENST00000638826 RPS28P62857 69 aaKnown RBP2.33□□□□□ -2.04
SMG7-216ENST00000638826 KRTAP9-6A8MVA2 160 aa2.32□□□□□ -2.04
SMG7-216ENST00000638826 KRTAP5-1Q6L8H4 278 aa2.32□□□□□ -2.04
SMG7-216ENST00000638826 CDC42SE1Q9NRR8 79 aa2.3□□□□□ -2.04
SMG7-216ENST00000638826 V9GYY9 64 aa2.29□□□□□ -2.04
SMG7-216ENST00000638826 Q1T7F1 81 aa2.26□□□□□ -2.05
SMG7-216ENST00000638826 PSPHP1O15172 72 aa2.25□□□□□ -2.05
SMG7-216ENST00000638826 ROMO1P60602 79 aa2.23□□□□□ -2.05
SMG7-216ENST00000638826 LCE1EQ5T753 118 aa2.2□□□□□ -2.06
SMG7-216ENST00000638826 A6NED7 52 aa2.19□□□□□ -2.06
SMG7-216ENST00000638826 LCE1BQ5T7P3 118 aa2.05□□□□□ -2.08
SMG7-216ENST00000638826 LCE1CQ5T751 118 aa2.03□□□□□ -2.08
SMG7-216ENST00000638826 KRTAP5-6Q6L8G9 129 aaPredicted RBP2□□□□□ -2.09
SMG7-216ENST00000638826 KRTAP5-11Q6L8G4 156 aa1.89□□□□□ -2.11
SMG7-216ENST00000638826 LCE1FQ5T754 118 aa1.86□□□□□ -2.11
SMG7-216ENST00000638826 LCE3DQ9BYE3 92 aa1.79□□□□□ -2.12
SMG7-216ENST00000638826 PHGR1C9JFL3 82 aa1.76□□□□□ -2.13
SMG7-216ENST00000638826 LCE3EQ5T5B0 92 aa1.65□□□□□ -2.15
SMG7-216ENST00000638826 KRTAP4-4Q9BYR3 166 aa1.65□□□□□ -2.15
SMG7-216ENST00000638826 KRTAP21-2Q3LI59 83 aa1.64□□□□□ -2.15
SMG7-216ENST00000638826 BRK1Q8WUW1 75 aa1.64□□□□□ -2.15
SMG7-216ENST00000638826 PCP4P48539 62 aa1.61□□□□□ -2.15
SMG7-216ENST00000638826 PMAIP1Q13794 54 aa1.53□□□□□ -2.16
SMG7-216ENST00000638826 MUC19Q7Z5P9 8384 aa1.52□□□□□ -2.17
SMG7-216ENST00000638826 PRAC1Q96KF2 57 aa1.48□□□□□ -2.17
SMG7-216ENST00000638826 LUZP6Q538Z0 58 aa1.38□□□□□ -2.19
SMG7-216ENST00000638826 KRTAP21-1Q3LI58 79 aa1.36□□□□□ -2.19
SMG7-216ENST00000638826 KTN1-AS1Q86SY8 53 aa1.21□□□□□ -2.22
SMG7-216ENST00000638826 SVIPQ8NHG7 77 aa1.21□□□□□ -2.22
SMG7-216ENST00000638826 PRO0628Q9UI54 55 aa1.19□□□□□ -2.22
SMG7-216ENST00000638826 PRM1P04553 51 aa1.1□□□□□ -2.23
SMG7-216ENST00000638826 MUC16Q8WXI7 14507 aa1.09□□□□□ -2.23
SMG7-216ENST00000638826 NDUFAF8A1L188 74 aa0.94□□□□□ -2.26
SMG7-216ENST00000638826 A0A0A0MQY5 61 aa0.86□□□□□ -2.27
SMG7-216ENST00000638826 INE1O15225 51 aa0.63□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 99.7 ms