RNA–Protein interactions for RNA: ENST00000638448.1

GYPB-216, Transcript of glycophorin B (MNS blood group), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GYPB, Length 363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-216ENST00000638448 TOMM7Q9P0U1 55 aa-0.59□□□□□ -2.5
GYPB-216ENST00000638448 CFAP54Q96N23 3096 aa-0.6□□□□□ -2.51
GYPB-216ENST00000638448 ATMQ13315 3056 aa-0.61□□□□□ -2.51
GYPB-216ENST00000638448 PRUNE2Q8WUY3 3088 aa-0.61□□□□□ -2.51
GYPB-216ENST00000638448 IQGAP2Q13576 1575 aa-0.62□□□□□ -2.51
GYPB-216ENST00000638448 RPS29P62273 56 aaKnown RBP-0.65□□□□□ -2.51
GYPB-216ENST00000638448 RPL39P62891 51 aaKnown RBP-0.65□□□□□ -2.51
GYPB-216ENST00000638448 LINC01590Q5TEZ4 76 aa-0.65□□□□□ -2.51
GYPB-216ENST00000638448 MYO15AQ9UKN7 3530 aa-0.65□□□□□ -2.51
GYPB-216ENST00000638448 SAMD9LQ8IVG5 1584 aa-0.66□□□□□ -2.51
GYPB-216ENST00000638448 ABCA13Q86UQ4 5058 aa-0.66□□□□□ -2.51
GYPB-216ENST00000638448 MT1BP07438 61 aa-0.66□□□□□ -2.52
GYPB-216ENST00000638448 DMDP11532 3685 aa-0.66□□□□□ -2.52
GYPB-216ENST00000638448 ATP7AQ04656 1500 aa-0.67□□□□□ -2.52
GYPB-216ENST00000638448 RHPN1-AS1Q9BWJ2 59 aa-0.68□□□□□ -2.52
GYPB-216ENST00000638448 FREM2Q5SZK8 3169 aa-0.68□□□□□ -2.52
GYPB-216ENST00000638448 FRYLO94915 3013 aa-0.68□□□□□ -2.52
GYPB-216ENST00000638448 RPL39LQ96EH5 51 aaKnown RBP-0.69□□□□□ -2.52
GYPB-216ENST00000638448 DUOX1Q9NRD9 1551 aa-0.7□□□□□ -2.52
GYPB-216ENST00000638448 WDFY3Q8IZQ1 3526 aa-0.71□□□□□ -2.52
GYPB-216ENST00000638448 PCNTO95613 3336 aa-0.71□□□□□ -2.52
GYPB-216ENST00000638448 BOD1L1Q8NFC6 3051 aa-0.73□□□□□ -2.53
GYPB-216ENST00000638448 CENPEQ02224 2701 aa-0.74□□□□□ -2.53
GYPB-216ENST00000638448 A0A096LNI7 61 aa-0.74□□□□□ -2.53
GYPB-216ENST00000638448 TOP2AP11388 1531 aaKnown RBP-0.74□□□□□ -2.53
GYPB-216ENST00000638448 DEFB133Q30KQ1 61 aa-0.75□□□□□ -2.53
GYPB-216ENST00000638448 HTN1P15515 57 aa-0.76□□□□□ -2.53
GYPB-216ENST00000638448 SZT2Q5T011 3432 aa-0.76□□□□□ -2.53
GYPB-216ENST00000638448 MT1FP04733 61 aa-0.77□□□□□ -2.53
GYPB-216ENST00000638448 CEP350Q5VT06 3117 aa-0.77□□□□□ -2.53
GYPB-216ENST00000638448 MROH2BQ7Z745 1585 aa-0.78□□□□□ -2.53
GYPB-216ENST00000638448 DEFB104AQ8WTQ1 72 aa-0.78□□□□□ -2.53
GYPB-216ENST00000638448 WDFY4Q6ZS81 3184 aa-0.79□□□□□ -2.54
GYPB-216ENST00000638448 TTTY10Q9BZA0 68 aa-0.8□□□□□ -2.54
GYPB-216ENST00000638448 DNAH12Q6ZR08 3092 aa-0.81□□□□□ -2.54
GYPB-216ENST00000638448 SPEGQ15772 3267 aa-0.81□□□□□ -2.54
GYPB-216ENST00000638448 DEFB124Q8NES8 71 aa-0.81□□□□□ -2.54
GYPB-216ENST00000638448 CD52P31358 61 aa-0.82□□□□□ -2.54
GYPB-216ENST00000638448 KRTAP20-1Q3LI63 56 aa-0.83□□□□□ -2.54
GYPB-216ENST00000638448 MUC3AQ02505 3323 aa-0.84□□□□□ -2.54
GYPB-216ENST00000638448 MKI67P46013 3256 aaKnown RBP-0.84□□□□□ -2.54
GYPB-216ENST00000638448 SNRPGP62308 76 aaKnown RBP-0.85□□□□□ -2.55
GYPB-216ENST00000638448 XIRP2A4UGR9 3374 aa-0.85□□□□□ -2.55
GYPB-216ENST00000638448 H3BUX3 64 aa-0.88□□□□□ -2.55
GYPB-216ENST00000638448 USP34Q70CQ2 3546 aa-0.88□□□□□ -2.55
GYPB-216ENST00000638448 K7EIM0 57 aa-0.89□□□□□ -2.55
GYPB-216ENST00000638448 DCHS1Q96JQ0 3298 aa-0.9□□□□□ -2.55
GYPB-216ENST00000638448 EP400Q96L91 3159 aa-0.9□□□□□ -2.55
GYPB-216ENST00000638448 ARHGAP5-AS1Q96IT6 56 aa-0.92□□□□□ -2.56
GYPB-216ENST00000638448 DNAH14Q0VDD8 3507 aa-0.93□□□□□ -2.56
GYPB-216ENST00000638448 GCC2Q8IWJ2 1684 aa-0.93□□□□□ -2.56
GYPB-216ENST00000638448 PRCDQ00LT1 54 aa-0.93□□□□□ -2.56
GYPB-216ENST00000638448 LOC400499M0QZD8 3231 aa-0.94□□□□□ -2.56
GYPB-216ENST00000638448 UNC80Q8N2C7 3258 aa-0.95□□□□□ -2.56
GYPB-216ENST00000638448 LINC01556Q5JQF7 62 aa-0.96□□□□□ -2.56
GYPB-216ENST00000638448 ASPMQ8IZT6 3477 aa-0.98□□□□□ -2.57
GYPB-216ENST00000638448 KRTAP19-6Q3LI70 58 aa-0.98□□□□□ -2.57
GYPB-216ENST00000638448 CFAP47Q6ZTR5 3102 aa-1□□□□□ -2.57
GYPB-216ENST00000638448 VCANP13611 3396 aa-1.01□□□□□ -2.57
GYPB-216ENST00000638448 KRTAP19-2Q3LHN2 52 aa-1.01□□□□□ -2.57
GYPB-216ENST00000638448 TMEM167AQ8TBQ9 72 aa-1.02□□□□□ -2.57
GYPB-216ENST00000638448 BRCA2P51587 3418 aa-1.04□□□□□ -2.58
GYPB-216ENST00000638448 H3BSH0 61 aa-1.05□□□□□ -2.58
GYPB-216ENST00000638448 A0A096LPF7 62 aa-1.06□□□□□ -2.58
GYPB-216ENST00000638448 APELAP0DMC3 54 aa-1.06□□□□□ -2.58
GYPB-216ENST00000638448 RPL39P5Q59GN2 51 aa-1.09□□□□□ -2.58
GYPB-216ENST00000638448 DEFB108AA8MXU0 73 aa-1.11□□□□□ -2.59
GYPB-216ENST00000638448 CENPFP49454 3210 aa-1.12□□□□□ -2.59
GYPB-216ENST00000638448 CDH23Q9H251 3354 aa-1.14□□□□□ -2.59
GYPB-216ENST00000638448 HTN3P15516 51 aa-1.18□□□□□ -2.6
GYPB-216ENST00000638448 VPS13AQ96RL7 3174 aa-1.2□□□□□ -2.6
GYPB-216ENST00000638448 Q9Y3F1 56 aa-1.21□□□□□ -2.6
GYPB-216ENST00000638448 UTRNP46939 3433 aa-1.25□□□□□ -2.61
GYPB-216ENST00000638448 DEFB108BQ8NET1 73 aa-1.34□□□□□ -2.62
GYPB-216ENST00000638448 COX14Q96I36 57 aa-1.35□□□□□ -2.63
GYPB-216ENST00000638448 GOLGB1Q14789 3259 aaKnown RBP-1.39□□□□□ -2.63
GYPB-216ENST00000638448 STATHP02808 62 aa-1.53□□□□□ -2.65
Retrieved 77 of 20,778 RNA–protein pairs in 85.9 ms