RNA–Protein interactions for RNA: ENST00000638295.1

SCARB2-207, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-207ENST00000638295 SYNE2Q8WXH0 6885 aaKnown RBP2.38□□□□□ -2.03
SCARB2-207ENST00000638295 KRTAP4-8A0A0G2JLE6 195 aa2.36□□□□□ -2.03
SCARB2-207ENST00000638295 KRTAP4-8Q9BYQ9 185 aa2.36□□□□□ -2.03
SCARB2-207ENST00000638295 KRTAP2-3P0C7H8 128 aa2.36□□□□□ -2.03
SCARB2-207ENST00000638295 KRTAP2-4Q9BYR9 128 aa2.36□□□□□ -2.03
SCARB2-207ENST00000638295 LCE3BQ5TA77 95 aa2.34□□□□□ -2.04
SCARB2-207ENST00000638295 MUC2Q02817 5179 aa2.33□□□□□ -2.04
SCARB2-207ENST00000638295 KRTAP19-3Q7Z4W3 81 aa2.32□□□□□ -2.04
SCARB2-207ENST00000638295 LCE1AQ5T7P2 110 aa2.29□□□□□ -2.04
SCARB2-207ENST00000638295 KRTAP2-2Q9BYT5 123 aa2.28□□□□□ -2.04
SCARB2-207ENST00000638295 KRTAP2-1Q9BYU5 128 aa2.28□□□□□ -2.04
SCARB2-207ENST00000638295 MT1EP04732 61 aa2.24□□□□□ -2.05
SCARB2-207ENST00000638295 MT1LQ93083 61 aa2.24□□□□□ -2.05
SCARB2-207ENST00000638295 USH2AO75445 5202 aa2.24□□□□□ -2.05
SCARB2-207ENST00000638295 LOC100996750A0A140TA64 210 aa2.22□□□□□ -2.05
SCARB2-207ENST00000638295 KRTAP4-6Q9BYQ5 205 aa2.22□□□□□ -2.05
SCARB2-207ENST00000638295 MT4P47944 62 aa2.21□□□□□ -2.06
SCARB2-207ENST00000638295 MT1MQ8N339 61 aa2.18□□□□□ -2.06
SCARB2-207ENST00000638295 SSPOA2VEC9 5147 aa2.18□□□□□ -2.06
SCARB2-207ENST00000638295 FCGBPQ9Y6R7 5405 aaPredicted RBP2.17□□□□□ -2.06
SCARB2-207ENST00000638295 NEBP20929 6669 aa2.16□□□□□ -2.06
SCARB2-207ENST00000638295 MACF1Q9UPN3 7388 aaKnown RBP2.14□□□□□ -2.07
SCARB2-207ENST00000638295 KRTAP5-9P26371 169 aa2.14□□□□□ -2.07
SCARB2-207ENST00000638295 LCE4AQ5TA78 99 aa2.13□□□□□ -2.07
SCARB2-207ENST00000638295 SPRR5A0A1B0GTR4 108 aa2.13□□□□□ -2.07
SCARB2-207ENST00000638295 MT3P25713 68 aa2.13□□□□□ -2.07
SCARB2-207ENST00000638295 KMT2DO14686 5537 aa2.13□□□□□ -2.07
SCARB2-207ENST00000638295 SYNE1Q8NF91 8797 aaKnown RBP2.13□□□□□ -2.07
SCARB2-207ENST00000638295 KRTAP19-7Q3SYF9 63 aa2.11□□□□□ -2.07
SCARB2-207ENST00000638295 LCE3DQ9BYE3 92 aa2.11□□□□□ -2.07
SCARB2-207ENST00000638295 LCE3EQ5T5B0 92 aa2.08□□□□□ -2.08
SCARB2-207ENST00000638295 LCE5AQ5TCM9 118 aa2.06□□□□□ -2.08
SCARB2-207ENST00000638295 KRTAP4-9Q9BYQ8 210 aa2.06□□□□□ -2.08
SCARB2-207ENST00000638295 KRTAP4-7Q9BYR0 210 aa2.04□□□□□ -2.08
SCARB2-207ENST00000638295 MT1AP04731 61 aa2.03□□□□□ -2.08
SCARB2-207ENST00000638295 GPR98Q8WXG9 6306 aa2.02□□□□□ -2.09
SCARB2-207ENST00000638295 KRTAP4-3Q9BYR4 195 aa2.02□□□□□ -2.09
SCARB2-207ENST00000638295 MDN1Q9NU22 5596 aa1.98□□□□□ -2.09
SCARB2-207ENST00000638295 DSTQ03001 7570 aaKnown RBP1.96□□□□□ -2.1
SCARB2-207ENST00000638295 KRTAP9-9Q9BYP9 154 aa1.94□□□□□ -2.1
SCARB2-207ENST00000638295 KRTAP9-4Q9BYQ2 154 aa1.94□□□□□ -2.1
SCARB2-207ENST00000638295 LCE1DQ5T752 114 aa1.92□□□□□ -2.1
SCARB2-207ENST00000638295 KRTAP4-12Q9BQ66 201 aa1.9□□□□□ -2.1
SCARB2-207ENST00000638295 LCE1BQ5T7P3 118 aa1.9□□□□□ -2.11
SCARB2-207ENST00000638295 OBSCNQ5VST9 7968 aa1.88□□□□□ -2.11
SCARB2-207ENST00000638295 MUC12Q9UKN1 5478 aa1.86□□□□□ -2.11
SCARB2-207ENST00000638295 KRTAP6-2Q3LI66 62 aa1.82□□□□□ -2.12
SCARB2-207ENST00000638295 KRTAP6-1Q3LI64 71 aa1.81□□□□□ -2.12
SCARB2-207ENST00000638295 KRTAP20-2Q3LI61 65 aa1.79□□□□□ -2.12
SCARB2-207ENST00000638295 KRTAP4-2Q9BYR5 136 aa1.76□□□□□ -2.13
SCARB2-207ENST00000638295 KRTAP5-4Q6L8H1 288 aa1.75□□□□□ -2.13
SCARB2-207ENST00000638295 PRM1P04553 51 aa1.75□□□□□ -2.13
SCARB2-207ENST00000638295 KRTAP9-6A8MVA2 160 aa1.71□□□□□ -2.14
SCARB2-207ENST00000638295 KRTAP4-11Q9BYQ6 195 aa1.7□□□□□ -2.14
SCARB2-207ENST00000638295 KRTAP5-3Q6L8H2 238 aa1.69□□□□□ -2.14
SCARB2-207ENST00000638295 AHNAK2Q8IVF2 5795 aa1.68□□□□□ -2.14
SCARB2-207ENST00000638295 LCE1CQ5T751 118 aa1.63□□□□□ -2.15
SCARB2-207ENST00000638295 LCE1EQ5T753 118 aa1.63□□□□□ -2.15
SCARB2-207ENST00000638295 LCE1FQ5T754 118 aa1.63□□□□□ -2.15
SCARB2-207ENST00000638295 HMCN1Q96RW7 5635 aa1.63□□□□□ -2.15
SCARB2-207ENST00000638295 KRTAP5-5Q701N2 237 aaPredicted RBP1.57□□□□□ -2.16
SCARB2-207ENST00000638295 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.5□□□□□ -2.17
SCARB2-207ENST00000638295 AHNAKQ09666 5890 aaKnown RBP1.49□□□□□ -2.17
SCARB2-207ENST00000638295 KRTAP5-8O75690 187 aa1.47□□□□□ -2.17
SCARB2-207ENST00000638295 MUC5ACP98088 5654 aa1.46□□□□□ -2.18
SCARB2-207ENST00000638295 KRTAP5-7Q6L8G8 165 aa1.45□□□□□ -2.18
SCARB2-207ENST00000638295 KRTAP5-10Q6L8G5 202 aa1.45□□□□□ -2.18
SCARB2-207ENST00000638295 MUC19Q7Z5P9 8384 aa1.44□□□□□ -2.18
SCARB2-207ENST00000638295 KRTAP5-2Q701N4 177 aa1.41□□□□□ -2.18
SCARB2-207ENST00000638295 MUC5BQ9HC84 5762 aaPredicted RBP1.3□□□□□ -2.2
SCARB2-207ENST00000638295 KRTAP5-1Q6L8H4 278 aa1.26□□□□□ -2.21
SCARB2-207ENST00000638295 KRTAP4-4Q9BYR3 166 aa1.25□□□□□ -2.21
SCARB2-207ENST00000638295 PHGR1C9JFL3 82 aa1.23□□□□□ -2.21
SCARB2-207ENST00000638295 KRTAP5-11Q6L8G4 156 aa1.18□□□□□ -2.22
SCARB2-207ENST00000638295 KRTAP21-2Q3LI59 83 aa1.01□□□□□ -2.25
SCARB2-207ENST00000638295 KRTAP21-1Q3LI58 79 aa0.93□□□□□ -2.26
SCARB2-207ENST00000638295 MUC16Q8WXI7 14507 aa0.7□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 102.6 ms