RNA–Protein interactions for RNA: ENST00000637667.1

CLN6-222, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 874 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-222ENST00000637667 AHNAK2Q8IVF2 5795 aa6.97□□□□□ -1.29
CLN6-222ENST00000637667 ANAPC13Q9BS18 74 aa6.93□□□□□ -1.3
CLN6-222ENST00000637667 KRTAP5-4Q6L8H1 288 aa6.92□□□□□ -1.3
CLN6-222ENST00000637667 PRR15LQ9BU68 103 aa6.89□□□□□ -1.31
CLN6-222ENST00000637667 CCDC179H3BU77 68 aa6.81□□□□□ -1.32
CLN6-222ENST00000637667 KRTAP5-7Q6L8G8 165 aa6.81□□□□□ -1.32
CLN6-222ENST00000637667 KRTAP4-6Q9BYQ5 205 aa6.81□□□□□ -1.32
CLN6-222ENST00000637667 KRTAP12-3P60328 96 aa6.8□□□□□ -1.32
CLN6-222ENST00000637667 ATP5EP56381 51 aaPredicted RBP6.79□□□□□ -1.32
CLN6-222ENST00000637667 KRTAP4-7Q9BYR0 210 aa6.78□□□□□ -1.32
CLN6-222ENST00000637667 LINC01558Q9Y6Z2 57 aa6.78□□□□□ -1.32
CLN6-222ENST00000637667 KRTAP5-3Q6L8H2 238 aa6.68□□□□□ -1.34
CLN6-222ENST00000637667 SPRR5A0A1B0GTR4 108 aa6.66□□□□□ -1.34
CLN6-222ENST00000637667 UQCR11O14957 56 aa6.65□□□□□ -1.34
CLN6-222ENST00000637667 KRTAP5-5Q701N2 237 aaPredicted RBP6.57□□□□□ -1.36
CLN6-222ENST00000637667 KRTAP25-1Q3LHN0 102 aa6.55□□□□□ -1.36
CLN6-222ENST00000637667 KRTAP20-2Q3LI61 65 aa6.54□□□□□ -1.36
CLN6-222ENST00000637667 TMEM258P61165 79 aa6.53□□□□□ -1.36
CLN6-222ENST00000637667 MIR22HGQ0VDD5 57 aa6.49□□□□□ -1.37
CLN6-222ENST00000637667 KRTAP12-4P60329 112 aa6.46□□□□□ -1.38
CLN6-222ENST00000637667 LOC100996750A0A140TA64 210 aa6.43□□□□□ -1.38
CLN6-222ENST00000637667 K7ERS5 55 aa6.4□□□□□ -1.38
CLN6-222ENST00000637667 KRTAP19-4Q3LI73 84 aa6.39□□□□□ -1.39
CLN6-222ENST00000637667 SYNE1Q8NF91 8797 aaKnown RBP6.35□□□□□ -1.39
CLN6-222ENST00000637667 KRTAP23-1A1A580 65 aa6.29□□□□□ -1.4
CLN6-222ENST00000637667 KRTAP15-1Q3LI76 137 aa6.29□□□□□ -1.4
CLN6-222ENST00000637667 PSPHP1O15172 72 aa6.26□□□□□ -1.41
CLN6-222ENST00000637667 LCE3CQ5T5A8 94 aa6.23□□□□□ -1.41
CLN6-222ENST00000637667 V9GYY9 64 aa6.23□□□□□ -1.41
CLN6-222ENST00000637667 Q1T7F1 81 aa6.17□□□□□ -1.42
CLN6-222ENST00000637667 MT1AP04731 61 aa6.07□□□□□ -1.44
CLN6-222ENST00000637667 KRTAP6-1Q3LI64 71 aa6.05□□□□□ -1.44
CLN6-222ENST00000637667 KRTAP5-2Q701N4 177 aa6.04□□□□□ -1.44
CLN6-222ENST00000637667 CDC42SE1Q9NRR8 79 aa6.04□□□□□ -1.44
CLN6-222ENST00000637667 A6NED7 52 aa6.03□□□□□ -1.44
CLN6-222ENST00000637667 KRTAP4-11Q9BYQ6 195 aa6.03□□□□□ -1.44
CLN6-222ENST00000637667 AHNAKQ09666 5890 aaKnown RBP5.95□□□□□ -1.46
CLN6-222ENST00000637667 ROMO1P60602 79 aa5.93□□□□□ -1.46
CLN6-222ENST00000637667 RPS28P62857 69 aaKnown RBP5.92□□□□□ -1.46
CLN6-222ENST00000637667 MUC5ACP98088 5654 aa5.92□□□□□ -1.46
CLN6-222ENST00000637667 KRTAP9-6A8MVA2 160 aa5.9□□□□□ -1.46
CLN6-222ENST00000637667 KRTAP9-4Q9BYQ2 154 aa5.88□□□□□ -1.47
CLN6-222ENST00000637667 KRTAP5-8O75690 187 aa5.83□□□□□ -1.48
CLN6-222ENST00000637667 MUC5BQ9HC84 5762 aaPredicted RBP5.81□□□□□ -1.48
CLN6-222ENST00000637667 KRTAP6-2Q3LI66 62 aa5.81□□□□□ -1.48
CLN6-222ENST00000637667 KRTAP9-9Q9BYP9 154 aa5.67□□□□□ -1.5
CLN6-222ENST00000637667 OBSCNQ5VST9 7968 aa5.66□□□□□ -1.5
CLN6-222ENST00000637667 MT3P25713 68 aa5.56□□□□□ -1.52
CLN6-222ENST00000637667 KRTAP5-1Q6L8H4 278 aa5.45□□□□□ -1.54
CLN6-222ENST00000637667 PCP4P48539 62 aa5.3□□□□□ -1.56
CLN6-222ENST00000637667 LCE1EQ5T753 118 aa5.15□□□□□ -1.59
CLN6-222ENST00000637667 BRK1Q8WUW1 75 aa4.91□□□□□ -1.62
CLN6-222ENST00000637667 KRTAP4-2Q9BYR5 136 aa4.89□□□□□ -1.63
CLN6-222ENST00000637667 LCE1BQ5T7P3 118 aa4.87□□□□□ -1.63
CLN6-222ENST00000637667 LCE1CQ5T751 118 aa4.77□□□□□ -1.65
CLN6-222ENST00000637667 PMAIP1Q13794 54 aa4.59□□□□□ -1.67
CLN6-222ENST00000637667 PRAC1Q96KF2 57 aa4.52□□□□□ -1.69
CLN6-222ENST00000637667 KRTAP4-12Q9BQ66 201 aa4.49□□□□□ -1.69
CLN6-222ENST00000637667 LCE3DQ9BYE3 92 aa4.45□□□□□ -1.7
CLN6-222ENST00000637667 KRTAP5-11Q6L8G4 156 aa4.35□□□□□ -1.71
CLN6-222ENST00000637667 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.32□□□□□ -1.72
CLN6-222ENST00000637667 LCE1FQ5T754 118 aa4.26□□□□□ -1.73
CLN6-222ENST00000637667 LCE3EQ5T5B0 92 aa4.16□□□□□ -1.74
CLN6-222ENST00000637667 PHGR1C9JFL3 82 aa4.15□□□□□ -1.75
CLN6-222ENST00000637667 PRO0628Q9UI54 55 aa4□□□□□ -1.77
CLN6-222ENST00000637667 KRTAP21-2Q3LI59 83 aa3.98□□□□□ -1.77
CLN6-222ENST00000637667 KTN1-AS1Q86SY8 53 aa3.91□□□□□ -1.78
CLN6-222ENST00000637667 LUZP6Q538Z0 58 aa3.85□□□□□ -1.79
CLN6-222ENST00000637667 SVIPQ8NHG7 77 aa3.82□□□□□ -1.8
CLN6-222ENST00000637667 KRTAP4-4Q9BYR3 166 aa3.68□□□□□ -1.82
CLN6-222ENST00000637667 MUC19Q7Z5P9 8384 aa3.53□□□□□ -1.85
CLN6-222ENST00000637667 KRTAP21-1Q3LI58 79 aa3.15□□□□□ -1.91
CLN6-222ENST00000637667 PRM1P04553 51 aa3.02□□□□□ -1.93
CLN6-222ENST00000637667 NDUFAF8A1L188 74 aa2.79□□□□□ -1.96
CLN6-222ENST00000637667 H3BS24 57 aa2.53□□□□□ -2
CLN6-222ENST00000637667 MUC16Q8WXI7 14507 aa2.52□□□□□ -2.01
CLN6-222ENST00000637667 INE1O15225 51 aa2.24□□□□□ -2.05
CLN6-222ENST00000637667 A0A0A0MQY5 61 aa2.22□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 71.5 ms