RNA–Protein interactions for RNA: ENST00000636861.1

CHD2-225, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 146 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-225ENST00000636861 KRTAP9-8Q9BYQ0 159 aa1.79□□□□□ -2.12
CHD2-225ENST00000636861 SPRR2EP22531 72 aa1.76□□□□□ -2.13
CHD2-225ENST00000636861 SPRR2BP35325 72 aa1.76□□□□□ -2.13
CHD2-225ENST00000636861 SPRR2AP35326 72 aa1.76□□□□□ -2.13
CHD2-225ENST00000636861 KRTAP9-3Q9BYQ3 159 aa1.76□□□□□ -2.13
CHD2-225ENST00000636861 M0R2T5 61 aa1.75□□□□□ -2.13
CHD2-225ENST00000636861 MUC5ACP98088 5654 aa1.75□□□□□ -2.13
CHD2-225ENST00000636861 LCE3BQ5TA77 95 aa1.72□□□□□ -2.13
CHD2-225ENST00000636861 SPRR2DP22532 72 aa1.71□□□□□ -2.14
CHD2-225ENST00000636861 LCE1DQ5T752 114 aa1.71□□□□□ -2.14
CHD2-225ENST00000636861 KRTAP5-3Q6L8H2 238 aa1.71□□□□□ -2.14
CHD2-225ENST00000636861 LCE1AQ5T7P2 110 aa1.7□□□□□ -2.14
CHD2-225ENST00000636861 MT1FP04733 61 aa1.69□□□□□ -2.14
CHD2-225ENST00000636861 MT2AP02795 61 aa1.68□□□□□ -2.14
CHD2-225ENST00000636861 SPRR2FQ96RM1 72 aa1.64□□□□□ -2.15
CHD2-225ENST00000636861 KRTAP8-1Q8IUC2 63 aa1.62□□□□□ -2.15
CHD2-225ENST00000636861 KRTAP10-10P60014 251 aa1.61□□□□□ -2.15
CHD2-225ENST00000636861 LCE3AQ5TA76 89 aa1.6□□□□□ -2.15
CHD2-225ENST00000636861 MT4P47944 62 aa1.58□□□□□ -2.16
CHD2-225ENST00000636861 KRTAP12-3P60328 96 aa1.56□□□□□ -2.16
CHD2-225ENST00000636861 KRTAP19-4Q3LI73 84 aa1.55□□□□□ -2.16
CHD2-225ENST00000636861 KRTAP4-7Q9BYR0 210 aa1.55□□□□□ -2.16
CHD2-225ENST00000636861 SPRR2GQ9BYE4 73 aa1.54□□□□□ -2.16
CHD2-225ENST00000636861 KRTAP10-12P60413 245 aa1.53□□□□□ -2.16
CHD2-225ENST00000636861 KRTAP5-4Q6L8H1 288 aa1.51□□□□□ -2.17
CHD2-225ENST00000636861 KRTAP4-6Q9BYQ5 205 aa1.51□□□□□ -2.17
CHD2-225ENST00000636861 KRTAP10-5P60370 271 aa1.5□□□□□ -2.17
CHD2-225ENST00000636861 LCE3CQ5T5A8 94 aa1.47□□□□□ -2.17
CHD2-225ENST00000636861 KRTAP5-8O75690 187 aa1.45□□□□□ -2.18
CHD2-225ENST00000636861 KRTAP4-8A0A0G2JLE6 195 aa1.43□□□□□ -2.18
CHD2-225ENST00000636861 LCE4AQ5TA78 99 aa1.43□□□□□ -2.18
CHD2-225ENST00000636861 KRTAP19-8Q3LI54 63 aa1.42□□□□□ -2.18
CHD2-225ENST00000636861 KRTAP9-9Q9BYP9 154 aa1.4□□□□□ -2.19
CHD2-225ENST00000636861 LOC100996750A0A140TA64 210 aa1.39□□□□□ -2.19
CHD2-225ENST00000636861 KRTAP10-7P60409 375 aaPredicted RBP1.38□□□□□ -2.19
CHD2-225ENST00000636861 MT1XP80297 61 aa1.38□□□□□ -2.19
CHD2-225ENST00000636861 KRTAP4-2Q9BYR5 136 aa1.38□□□□□ -2.19
CHD2-225ENST00000636861 SYNE1Q8NF91 8797 aaKnown RBP1.37□□□□□ -2.19
CHD2-225ENST00000636861 MT1BP07438 61 aa1.37□□□□□ -2.19
CHD2-225ENST00000636861 KRTAP4-11Q9BYQ6 195 aa1.36□□□□□ -2.19
CHD2-225ENST00000636861 KRTAP19-5Q3LI72 72 aa1.35□□□□□ -2.19
CHD2-225ENST00000636861 KRTAP12-4P60329 112 aa1.34□□□□□ -2.19
CHD2-225ENST00000636861 KRTAP20-2Q3LI61 65 aa1.33□□□□□ -2.2
CHD2-225ENST00000636861 KRTAP5-2Q701N4 177 aa1.33□□□□□ -2.2
CHD2-225ENST00000636861 KRTAP4-8Q9BYQ9 185 aa1.31□□□□□ -2.2
CHD2-225ENST00000636861 KRTAP9-6A8MVA2 160 aa1.3□□□□□ -2.2
CHD2-225ENST00000636861 MT1EP04732 61 aa1.27□□□□□ -2.21
CHD2-225ENST00000636861 MT1LQ93083 61 aa1.26□□□□□ -2.21
CHD2-225ENST00000636861 MT1AP04731 61 aa1.25□□□□□ -2.21
CHD2-225ENST00000636861 OBSCNQ5VST9 7968 aa1.24□□□□□ -2.21
CHD2-225ENST00000636861 LCE5AQ5TCM9 118 aa1.23□□□□□ -2.21
CHD2-225ENST00000636861 PRM1P04553 51 aa1.22□□□□□ -2.21
CHD2-225ENST00000636861 LCE3EQ5T5B0 92 aa1.22□□□□□ -2.21
CHD2-225ENST00000636861 KRTAP19-7Q3SYF9 63 aa1.21□□□□□ -2.22
CHD2-225ENST00000636861 LCE3DQ9BYE3 92 aa1.19□□□□□ -2.22
CHD2-225ENST00000636861 MT1GP13640 62 aa1.14□□□□□ -2.23
CHD2-225ENST00000636861 MT3P25713 68 aa1.13□□□□□ -2.23
CHD2-225ENST00000636861 PHGR1C9JFL3 82 aa1.12□□□□□ -2.23
CHD2-225ENST00000636861 KRTAP5-1Q6L8H4 278 aa1.12□□□□□ -2.23
CHD2-225ENST00000636861 KRTAP5-5Q701N2 237 aaPredicted RBP1.12□□□□□ -2.23
CHD2-225ENST00000636861 KRTAP19-3Q7Z4W3 81 aa1.11□□□□□ -2.23
CHD2-225ENST00000636861 MT1MQ8N339 61 aa1.11□□□□□ -2.23
CHD2-225ENST00000636861 KRTAP6-2Q3LI66 62 aa1.09□□□□□ -2.23
CHD2-225ENST00000636861 KRTAP4-3Q9BYR4 195 aa1.09□□□□□ -2.23
CHD2-225ENST00000636861 LCE1EQ5T753 118 aa1.06□□□□□ -2.24
CHD2-225ENST00000636861 KRTAP4-12Q9BQ66 201 aa1.03□□□□□ -2.24
CHD2-225ENST00000636861 KRTAP6-1Q3LI64 71 aa1□□□□□ -2.25
CHD2-225ENST00000636861 LCE1FQ5T754 118 aa0.98□□□□□ -2.25
CHD2-225ENST00000636861 KRTAP9-4Q9BYQ2 154 aa0.98□□□□□ -2.25
CHD2-225ENST00000636861 KRTAP5-11Q6L8G4 156 aa0.96□□□□□ -2.26
CHD2-225ENST00000636861 MUC19Q7Z5P9 8384 aa0.85□□□□□ -2.27
CHD2-225ENST00000636861 KRTAP21-1Q3LI58 79 aa0.83□□□□□ -2.28
CHD2-225ENST00000636861 LCE1BQ5T7P3 118 aa0.77□□□□□ -2.29
CHD2-225ENST00000636861 LCE1CQ5T751 118 aa0.74□□□□□ -2.29
CHD2-225ENST00000636861 KRTAP4-4Q9BYR3 166 aa0.71□□□□□ -2.3
CHD2-225ENST00000636861 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.68□□□□□ -2.3
CHD2-225ENST00000636861 KRTAP21-2Q3LI59 83 aa0.66□□□□□ -2.3
CHD2-225ENST00000636861 MUC16Q8WXI7 14507 aa0.55□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 11.4 ms