RNA–Protein interactions for RNA: ENST00000636554.1

THUMPD1-206, Transcript of THUMP domain containing 1, humanhuman

TSL 5

Gene THUMPD1, Length 2,567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-206ENST00000636554 MT1EP04732 61 aa5.07□□□□□ -1.6
THUMPD1-206ENST00000636554 CRCT1Q9UGL9 99 aa5.03□□□□□ -1.6
THUMPD1-206ENST00000636554 LOC100996750A0A140TA64 210 aa5.01□□□□□ -1.61
THUMPD1-206ENST00000636554 KRTAP4-6Q9BYQ5 205 aa5.01□□□□□ -1.61
THUMPD1-206ENST00000636554 SSPOA2VEC9 5147 aa4.98□□□□□ -1.61
THUMPD1-206ENST00000636554 KRTAP19-4Q3LI73 84 aa4.93□□□□□ -1.62
THUMPD1-206ENST00000636554 KRTAP4-3Q9BYR4 195 aa4.92□□□□□ -1.62
THUMPD1-206ENST00000636554 MT1GP13640 62 aa4.84□□□□□ -1.63
THUMPD1-206ENST00000636554 FCGBPQ9Y6R7 5405 aaPredicted RBP4.84□□□□□ -1.63
THUMPD1-206ENST00000636554 MUC12Q9UKN1 5478 aa4.82□□□□□ -1.64
THUMPD1-206ENST00000636554 SYNE2Q8WXH0 6885 aaKnown RBP4.77□□□□□ -1.65
THUMPD1-206ENST00000636554 MACF1Q9UPN3 7388 aaKnown RBP4.74□□□□□ -1.65
THUMPD1-206ENST00000636554 MT1MQ8N339 61 aa4.72□□□□□ -1.65
THUMPD1-206ENST00000636554 KRTAP19-6Q3LI70 58 aa4.71□□□□□ -1.65
THUMPD1-206ENST00000636554 DSTQ03001 7570 aaKnown RBP4.71□□□□□ -1.66
THUMPD1-206ENST00000636554 KRTAP12-4P60329 112 aa4.7□□□□□ -1.66
THUMPD1-206ENST00000636554 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.69□□□□□ -1.66
THUMPD1-206ENST00000636554 KRTAP19-3Q7Z4W3 81 aa4.67□□□□□ -1.66
THUMPD1-206ENST00000636554 KRTAP9-7A8MTY7 169 aa4.64□□□□□ -1.67
THUMPD1-206ENST00000636554 LCE3BQ5TA77 95 aa4.55□□□□□ -1.68
THUMPD1-206ENST00000636554 KRTAP4-9Q9BYQ8 210 aa4.54□□□□□ -1.68
THUMPD1-206ENST00000636554 LCE5AQ5TCM9 118 aa4.48□□□□□ -1.69
THUMPD1-206ENST00000636554 SYNE1Q8NF91 8797 aaKnown RBP4.46□□□□□ -1.69
THUMPD1-206ENST00000636554 SPRR2FQ96RM1 72 aa4.44□□□□□ -1.7
THUMPD1-206ENST00000636554 KRTAP6-1Q3LI64 71 aa4.37□□□□□ -1.71
THUMPD1-206ENST00000636554 MDN1Q9NU22 5596 aa4.36□□□□□ -1.71
THUMPD1-206ENST00000636554 MT1AP04731 61 aa4.32□□□□□ -1.72
THUMPD1-206ENST00000636554 LCE3DQ9BYE3 92 aa4.28□□□□□ -1.72
THUMPD1-206ENST00000636554 KRTAP6-3Q3LI67 103 aa4.26□□□□□ -1.73
THUMPD1-206ENST00000636554 KRTAP5-5Q701N2 237 aaPredicted RBP4.25□□□□□ -1.73
THUMPD1-206ENST00000636554 NEBP20929 6669 aa4.23□□□□□ -1.73
THUMPD1-206ENST00000636554 LCE3EQ5T5B0 92 aa4.23□□□□□ -1.73
THUMPD1-206ENST00000636554 PRM1P04553 51 aa4.22□□□□□ -1.73
THUMPD1-206ENST00000636554 OBSCNQ5VST9 7968 aa4.07□□□□□ -1.76
THUMPD1-206ENST00000636554 KRTAP5-9P26371 169 aa4.07□□□□□ -1.76
THUMPD1-206ENST00000636554 LCE1AQ5T7P2 110 aa4.07□□□□□ -1.76
THUMPD1-206ENST00000636554 KRTAP6-2Q3LI66 62 aa4.03□□□□□ -1.77
THUMPD1-206ENST00000636554 KRTAP20-1Q3LI63 56 aa4.02□□□□□ -1.77
THUMPD1-206ENST00000636554 SPRR2EP22531 72 aa3.99□□□□□ -1.77
THUMPD1-206ENST00000636554 SPRR2BP35325 72 aa3.99□□□□□ -1.77
THUMPD1-206ENST00000636554 SPRR2AP35326 72 aa3.99□□□□□ -1.77
THUMPD1-206ENST00000636554 KRTAP9-4Q9BYQ2 154 aa3.97□□□□□ -1.77
THUMPD1-206ENST00000636554 KRTAP9-9Q9BYP9 154 aa3.96□□□□□ -1.78
THUMPD1-206ENST00000636554 KRTAP5-3Q6L8H2 238 aa3.92□□□□□ -1.78
THUMPD1-206ENST00000636554 SPRR2DP22532 72 aa3.83□□□□□ -1.8
THUMPD1-206ENST00000636554 KRTAP4-12Q9BQ66 201 aa3.83□□□□□ -1.8
THUMPD1-206ENST00000636554 LCE1DQ5T752 114 aa3.81□□□□□ -1.8
THUMPD1-206ENST00000636554 KRTAP4-2Q9BYR5 136 aa3.81□□□□□ -1.8
THUMPD1-206ENST00000636554 MT3P25713 68 aa3.78□□□□□ -1.8
THUMPD1-206ENST00000636554 KRTAP2-2Q9BYT5 123 aa3.74□□□□□ -1.81
THUMPD1-206ENST00000636554 KRTAP4-11Q9BYQ6 195 aa3.52□□□□□ -1.85
THUMPD1-206ENST00000636554 HMCN1Q96RW7 5635 aa3.48□□□□□ -1.85
THUMPD1-206ENST00000636554 GPR98Q8WXG9 6306 aa3.48□□□□□ -1.85
THUMPD1-206ENST00000636554 MT4P47944 62 aa3.48□□□□□ -1.85
THUMPD1-206ENST00000636554 KRTAP5-4Q6L8H1 288 aa3.47□□□□□ -1.85
THUMPD1-206ENST00000636554 MUC5ACP98088 5654 aa3.33□□□□□ -1.88
THUMPD1-206ENST00000636554 KRTAP20-2Q3LI61 65 aa3.3□□□□□ -1.88
THUMPD1-206ENST00000636554 KRTAP5-2Q701N4 177 aa3.3□□□□□ -1.88
THUMPD1-206ENST00000636554 AHNAK2Q8IVF2 5795 aa3.28□□□□□ -1.88
THUMPD1-206ENST00000636554 LCE4AQ5TA78 99 aa3.24□□□□□ -1.89
THUMPD1-206ENST00000636554 LCE1EQ5T753 118 aa3.18□□□□□ -1.9
THUMPD1-206ENST00000636554 KRTAP5-10Q6L8G5 202 aa3.15□□□□□ -1.91
THUMPD1-206ENST00000636554 LCE1BQ5T7P3 118 aa3.1□□□□□ -1.91
THUMPD1-206ENST00000636554 KRTAP5-1Q6L8H4 278 aa3.02□□□□□ -1.93
THUMPD1-206ENST00000636554 KRTAP5-7Q6L8G8 165 aa2.96□□□□□ -1.94
THUMPD1-206ENST00000636554 LCE1CQ5T751 118 aa2.85□□□□□ -1.95
THUMPD1-206ENST00000636554 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.83□□□□□ -1.96
THUMPD1-206ENST00000636554 KRTAP21-2Q3LI59 83 aa2.79□□□□□ -1.96
THUMPD1-206ENST00000636554 KRTAP5-8O75690 187 aa2.78□□□□□ -1.96
THUMPD1-206ENST00000636554 MUC5BQ9HC84 5762 aaPredicted RBP2.78□□□□□ -1.96
THUMPD1-206ENST00000636554 MUC19Q7Z5P9 8384 aa2.65□□□□□ -1.98
THUMPD1-206ENST00000636554 KRTAP4-4Q9BYR3 166 aa2.64□□□□□ -1.99
THUMPD1-206ENST00000636554 AHNAKQ09666 5890 aaKnown RBP2.64□□□□□ -1.99
THUMPD1-206ENST00000636554 KRTAP21-1Q3LI58 79 aa2.63□□□□□ -1.99
THUMPD1-206ENST00000636554 LCE1FQ5T754 118 aa2.46□□□□□ -2.02
THUMPD1-206ENST00000636554 KRTAP5-11Q6L8G4 156 aa2.43□□□□□ -2.02
THUMPD1-206ENST00000636554 PHGR1C9JFL3 82 aa2.11□□□□□ -2.07
THUMPD1-206ENST00000636554 MUC16Q8WXI7 14507 aa1.5□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 124.7 ms