RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 LCE1BQ5T7P3 118 aa3.98□□□□□ -1.77
SYNGAP1-208ENST00000629380 HYDINQ4G0P3 5121 aa3.94□□□□□ -1.78
SYNGAP1-208ENST00000629380 LRP2P98164 4655 aa3.94□□□□□ -1.78
SYNGAP1-208ENST00000629380 KRTAP6-3Q3LI67 103 aa3.92□□□□□ -1.78
SYNGAP1-208ENST00000629380 KRTAP9-7A8MTY7 169 aa3.92□□□□□ -1.78
SYNGAP1-208ENST00000629380 KMT2CQ8NEZ4 4911 aaKnown RBP3.88□□□□□ -1.79
SYNGAP1-208ENST00000629380 LCE1AQ5T7P2 110 aa3.88□□□□□ -1.79
SYNGAP1-208ENST00000629380 KRTAP2-3P0C7H8 128 aa3.87□□□□□ -1.79
SYNGAP1-208ENST00000629380 KRTAP2-4Q9BYR9 128 aa3.87□□□□□ -1.79
SYNGAP1-208ENST00000629380 MT1AP04731 61 aa3.86□□□□□ -1.79
SYNGAP1-208ENST00000629380 EPPK1P58107 5090 aaKnown RBP3.86□□□□□ -1.79
SYNGAP1-208ENST00000629380 LPAP08519 4548 aa3.85□□□□□ -1.79
SYNGAP1-208ENST00000629380 KRTAP4-7Q9BYR0 210 aa3.83□□□□□ -1.8
SYNGAP1-208ENST00000629380 KRTAP2-1Q9BYU5 128 aa3.8□□□□□ -1.8
SYNGAP1-208ENST00000629380 LCE4AQ5TA78 99 aa3.76□□□□□ -1.81
SYNGAP1-208ENST00000629380 LOC100996750A0A140TA64 210 aa3.75□□□□□ -1.81
SYNGAP1-208ENST00000629380 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.75□□□□□ -1.81
SYNGAP1-208ENST00000629380 LCE5AQ5TCM9 118 aa3.74□□□□□ -1.81
SYNGAP1-208ENST00000629380 RNF213Q63HN8 5207 aa3.69□□□□□ -1.82
SYNGAP1-208ENST00000629380 KRTAP2-2Q9BYT5 123 aa3.69□□□□□ -1.82
SYNGAP1-208ENST00000629380 KRTAP19-7Q3SYF9 63 aa3.67□□□□□ -1.82
SYNGAP1-208ENST00000629380 ABCA13Q86UQ4 5058 aa3.65□□□□□ -1.83
SYNGAP1-208ENST00000629380 KRTAP4-3Q9BYR4 195 aa3.6□□□□□ -1.83
SYNGAP1-208ENST00000629380 LCE1CQ5T751 118 aa3.59□□□□□ -1.84
SYNGAP1-208ENST00000629380 LCE1EQ5T753 118 aa3.59□□□□□ -1.84
SYNGAP1-208ENST00000629380 LCE1FQ5T754 118 aa3.59□□□□□ -1.84
SYNGAP1-208ENST00000629380 SYNE2Q8WXH0 6885 aaKnown RBP3.59□□□□□ -1.84
SYNGAP1-208ENST00000629380 KRTAP6-2Q3LI66 62 aa3.55□□□□□ -1.84
SYNGAP1-208ENST00000629380 FAT4Q6V0I7 4981 aa3.54□□□□□ -1.84
SYNGAP1-208ENST00000629380 UBR4Q5T4S7 5183 aa3.51□□□□□ -1.85
SYNGAP1-208ENST00000629380 KRTAP4-9Q9BYQ8 210 aa3.49□□□□□ -1.85
SYNGAP1-208ENST00000629380 KRTAP9-4Q9BYQ2 154 aa3.47□□□□□ -1.85
SYNGAP1-208ENST00000629380 HMCN2Q8NDA2 5059 aa3.4□□□□□ -1.87
SYNGAP1-208ENST00000629380 KRTAP6-1Q3LI64 71 aa3.39□□□□□ -1.87
SYNGAP1-208ENST00000629380 FSIP2Q5CZC0 6907 aa3.35□□□□□ -1.87
SYNGAP1-208ENST00000629380 KRTAP9-9Q9BYP9 154 aa3.31□□□□□ -1.88
SYNGAP1-208ENST00000629380 MUC2Q02817 5179 aa3.3□□□□□ -1.88
SYNGAP1-208ENST00000629380 KRTAP5-9P26371 169 aa3.26□□□□□ -1.89
SYNGAP1-208ENST00000629380 SYNE1Q8NF91 8797 aaKnown RBP3.22□□□□□ -1.89
SYNGAP1-208ENST00000629380 NEBP20929 6669 aa3.19□□□□□ -1.9
SYNGAP1-208ENST00000629380 KRTAP9-6A8MVA2 160 aa3.13□□□□□ -1.91
SYNGAP1-208ENST00000629380 SSPOA2VEC9 5147 aa3.02□□□□□ -1.93
SYNGAP1-208ENST00000629380 KRTAP20-2Q3LI61 65 aa2.96□□□□□ -1.94
SYNGAP1-208ENST00000629380 USH2AO75445 5202 aa2.93□□□□□ -1.94
SYNGAP1-208ENST00000629380 KRTAP5-4Q6L8H1 288 aa2.91□□□□□ -1.94
SYNGAP1-208ENST00000629380 KRTAP4-6Q9BYQ5 205 aa2.88□□□□□ -1.95
SYNGAP1-208ENST00000629380 OBSCNQ5VST9 7968 aa2.87□□□□□ -1.95
SYNGAP1-208ENST00000629380 KRTAP4-11Q9BYQ6 195 aa2.87□□□□□ -1.95
SYNGAP1-208ENST00000629380 MACF1Q9UPN3 7388 aaKnown RBP2.82□□□□□ -1.96
SYNGAP1-208ENST00000629380 GPR98Q8WXG9 6306 aa2.78□□□□□ -1.96
SYNGAP1-208ENST00000629380 FCGBPQ9Y6R7 5405 aaPredicted RBP2.78□□□□□ -1.97
SYNGAP1-208ENST00000629380 MDN1Q9NU22 5596 aa2.67□□□□□ -1.98
SYNGAP1-208ENST00000629380 DSTQ03001 7570 aaKnown RBP2.65□□□□□ -1.98
SYNGAP1-208ENST00000629380 KRTAP4-4Q9BYR3 166 aa2.61□□□□□ -1.99
SYNGAP1-208ENST00000629380 MUC12Q9UKN1 5478 aa2.6□□□□□ -1.99
SYNGAP1-208ENST00000629380 KMT2DO14686 5537 aa2.58□□□□□ -2
SYNGAP1-208ENST00000629380 KRTAP5-3Q6L8H2 238 aa2.53□□□□□ -2
SYNGAP1-208ENST00000629380 KRTAP5-5Q701N2 237 aaPredicted RBP2.53□□□□□ -2
SYNGAP1-208ENST00000629380 KRTAP4-12Q9BQ66 201 aa2.52□□□□□ -2.01
SYNGAP1-208ENST00000629380 KRTAP4-2Q9BYR5 136 aa2.52□□□□□ -2.01
SYNGAP1-208ENST00000629380 AHNAK2Q8IVF2 5795 aa2.41□□□□□ -2.02
SYNGAP1-208ENST00000629380 MUC5ACP98088 5654 aa2.41□□□□□ -2.02
SYNGAP1-208ENST00000629380 HMCN1Q96RW7 5635 aa2.28□□□□□ -2.04
SYNGAP1-208ENST00000629380 MUC19Q7Z5P9 8384 aa2.23□□□□□ -2.05
SYNGAP1-208ENST00000629380 KRTAP5-8O75690 187 aa2.22□□□□□ -2.05
SYNGAP1-208ENST00000629380 MUC5BQ9HC84 5762 aaPredicted RBP2.19□□□□□ -2.06
SYNGAP1-208ENST00000629380 KRTAP5-2Q701N4 177 aa2.15□□□□□ -2.06
SYNGAP1-208ENST00000629380 PHGR1C9JFL3 82 aa2.12□□□□□ -2.07
SYNGAP1-208ENST00000629380 AHNAKQ09666 5890 aaKnown RBP2.09□□□□□ -2.08
SYNGAP1-208ENST00000629380 KRTAP5-10Q6L8G5 202 aa2.04□□□□□ -2.08
SYNGAP1-208ENST00000629380 KRTAP5-11Q6L8G4 156 aa2.03□□□□□ -2.09
SYNGAP1-208ENST00000629380 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.98□□□□□ -2.09
SYNGAP1-208ENST00000629380 KRTAP5-7Q6L8G8 165 aa1.86□□□□□ -2.11
SYNGAP1-208ENST00000629380 KRTAP5-1Q6L8H4 278 aa1.83□□□□□ -2.12
SYNGAP1-208ENST00000629380 KRTAP21-1Q3LI58 79 aa1.74□□□□□ -2.13
SYNGAP1-208ENST00000629380 KRTAP21-2Q3LI59 83 aa1.71□□□□□ -2.14
SYNGAP1-208ENST00000629380 MUC16Q8WXI7 14507 aa1.21□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 5.7 ms