RNA–Protein interactions for RNA: ENST00000628176.2

MECP2-217, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 3 BASIC

Gene MECP2, Length 1,712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-217ENST00000628176 KRTAP20-1Q3LI63 56 aa5.36□□□□□ -1.55
MECP2-217ENST00000628176 MDN1Q9NU22 5596 aa5.28□□□□□ -1.56
MECP2-217ENST00000628176 SPRR2FQ96RM1 72 aa5.25□□□□□ -1.57
MECP2-217ENST00000628176 KRTAP5-9P26371 169 aa5.24□□□□□ -1.57
MECP2-217ENST00000628176 INE1O15225 51 aa5.21□□□□□ -1.58
MECP2-217ENST00000628176 KRTAP19-7Q3SYF9 63 aa5.17□□□□□ -1.58
MECP2-217ENST00000628176 KRTAP19-5Q3LI72 72 aa5.16□□□□□ -1.58
MECP2-217ENST00000628176 KRTAP19-4Q3LI73 84 aa5.14□□□□□ -1.59
MECP2-217ENST00000628176 LCE3CQ5T5A8 94 aa5.14□□□□□ -1.59
MECP2-217ENST00000628176 KRTAP2-3P0C7H8 128 aa5.09□□□□□ -1.59
MECP2-217ENST00000628176 KRTAP2-4Q9BYR9 128 aa5.09□□□□□ -1.59
MECP2-217ENST00000628176 MT1EP04732 61 aa5.09□□□□□ -1.6
MECP2-217ENST00000628176 SPRR2EP22531 72 aa5.06□□□□□ -1.6
MECP2-217ENST00000628176 SPRR2BP35325 72 aa5.06□□□□□ -1.6
MECP2-217ENST00000628176 SPRR2AP35326 72 aa5.06□□□□□ -1.6
MECP2-217ENST00000628176 LCE1AQ5T7P2 110 aa5.06□□□□□ -1.6
MECP2-217ENST00000628176 KRTAP19-3Q7Z4W3 81 aa4.93□□□□□ -1.62
MECP2-217ENST00000628176 MT1LQ93083 61 aa4.93□□□□□ -1.62
MECP2-217ENST00000628176 KRTAP2-2Q9BYT5 123 aa4.91□□□□□ -1.62
MECP2-217ENST00000628176 KRTAP2-1Q9BYU5 128 aa4.91□□□□□ -1.62
MECP2-217ENST00000628176 LCE5AQ5TCM9 118 aa4.89□□□□□ -1.63
MECP2-217ENST00000628176 MT1GP13640 62 aa4.89□□□□□ -1.63
MECP2-217ENST00000628176 KRTAP9-6A8MVA2 160 aa4.88□□□□□ -1.63
MECP2-217ENST00000628176 SPRR2DP22532 72 aa4.87□□□□□ -1.63
MECP2-217ENST00000628176 DSTQ03001 7570 aaKnown RBP4.83□□□□□ -1.64
MECP2-217ENST00000628176 KRTAP4-7Q9BYR0 210 aa4.83□□□□□ -1.64
MECP2-217ENST00000628176 MT1MQ8N339 61 aa4.81□□□□□ -1.64
MECP2-217ENST00000628176 KRTAP4-3Q9BYR4 195 aa4.8□□□□□ -1.64
MECP2-217ENST00000628176 LCE3BQ5TA77 95 aa4.72□□□□□ -1.65
MECP2-217ENST00000628176 GPR98Q8WXG9 6306 aa4.66□□□□□ -1.66
MECP2-217ENST00000628176 LOC100996750A0A140TA64 210 aa4.55□□□□□ -1.68
MECP2-217ENST00000628176 KRTAP4-9Q9BYQ8 210 aa4.52□□□□□ -1.69
MECP2-217ENST00000628176 KRTAP5-5Q701N2 237 aaPredicted RBP4.36□□□□□ -1.71
MECP2-217ENST00000628176 LCE1DQ5T752 114 aa4.32□□□□□ -1.72
MECP2-217ENST00000628176 KRTAP5-4Q6L8H1 288 aa4.3□□□□□ -1.72
MECP2-217ENST00000628176 MT4P47944 62 aa4.29□□□□□ -1.72
MECP2-217ENST00000628176 HMCN1Q96RW7 5635 aa4.29□□□□□ -1.72
MECP2-217ENST00000628176 LCE4AQ5TA78 99 aa4.26□□□□□ -1.73
MECP2-217ENST00000628176 SYNE1Q8NF91 8797 aaKnown RBP4.26□□□□□ -1.73
MECP2-217ENST00000628176 AHNAK2Q8IVF2 5795 aa4.24□□□□□ -1.73
MECP2-217ENST00000628176 KRTAP4-6Q9BYQ5 205 aa4.23□□□□□ -1.73
MECP2-217ENST00000628176 MT1AP04731 61 aa4.21□□□□□ -1.74
MECP2-217ENST00000628176 KRTAP6-1Q3LI64 71 aa4.19□□□□□ -1.74
MECP2-217ENST00000628176 KRTAP12-4P60329 112 aa4.18□□□□□ -1.74
MECP2-217ENST00000628176 KRTAP5-10Q6L8G5 202 aa4.15□□□□□ -1.74
MECP2-217ENST00000628176 KRTAP20-2Q3LI61 65 aa4.07□□□□□ -1.76
MECP2-217ENST00000628176 KRTAP5-7Q6L8G8 165 aa4.03□□□□□ -1.76
MECP2-217ENST00000628176 KRTAP9-4Q9BYQ2 154 aa4.01□□□□□ -1.77
MECP2-217ENST00000628176 KRTAP5-3Q6L8H2 238 aa3.99□□□□□ -1.77
MECP2-217ENST00000628176 LCE3DQ9BYE3 92 aa3.95□□□□□ -1.78
MECP2-217ENST00000628176 KRTAP6-2Q3LI66 62 aa3.92□□□□□ -1.78
MECP2-217ENST00000628176 LCE3EQ5T5B0 92 aa3.92□□□□□ -1.78
MECP2-217ENST00000628176 MT3P25713 68 aa3.84□□□□□ -1.79
MECP2-217ENST00000628176 KRTAP5-2Q701N4 177 aa3.84□□□□□ -1.79
MECP2-217ENST00000628176 OBSCNQ5VST9 7968 aa3.73□□□□□ -1.81
MECP2-217ENST00000628176 PRM1P04553 51 aa3.67□□□□□ -1.82
MECP2-217ENST00000628176 KRTAP4-11Q9BYQ6 195 aa3.6□□□□□ -1.83
MECP2-217ENST00000628176 AHNAKQ09666 5890 aaKnown RBP3.56□□□□□ -1.84
MECP2-217ENST00000628176 MUC5ACP98088 5654 aa3.53□□□□□ -1.84
MECP2-217ENST00000628176 MUC5BQ9HC84 5762 aaPredicted RBP3.52□□□□□ -1.85
MECP2-217ENST00000628176 KRTAP5-8O75690 187 aa3.51□□□□□ -1.85
MECP2-217ENST00000628176 KRTAP9-9Q9BYP9 154 aa3.41□□□□□ -1.86
MECP2-217ENST00000628176 LCE1EQ5T753 118 aa3.4□□□□□ -1.87
MECP2-217ENST00000628176 KRTAP5-1Q6L8H4 278 aa3.4□□□□□ -1.87
MECP2-217ENST00000628176 LCE1BQ5T7P3 118 aa3.22□□□□□ -1.89
MECP2-217ENST00000628176 KRTAP4-2Q9BYR5 136 aa3.19□□□□□ -1.9
MECP2-217ENST00000628176 LCE1CQ5T751 118 aa3.16□□□□□ -1.9
MECP2-217ENST00000628176 LCE1FQ5T754 118 aa2.95□□□□□ -1.94
MECP2-217ENST00000628176 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.93□□□□□ -1.94
MECP2-217ENST00000628176 KRTAP4-12Q9BQ66 201 aa2.82□□□□□ -1.96
MECP2-217ENST00000628176 KRTAP5-11Q6L8G4 156 aa2.79□□□□□ -1.96
MECP2-217ENST00000628176 KRTAP21-2Q3LI59 83 aa2.73□□□□□ -1.97
MECP2-217ENST00000628176 KRTAP4-4Q9BYR3 166 aa2.54□□□□□ -2
MECP2-217ENST00000628176 PHGR1C9JFL3 82 aa2.49□□□□□ -2.01
MECP2-217ENST00000628176 KRTAP21-1Q3LI58 79 aa2.42□□□□□ -2.02
MECP2-217ENST00000628176 MUC19Q7Z5P9 8384 aa2.27□□□□□ -2.05
MECP2-217ENST00000628176 MUC16Q8WXI7 14507 aa1.54□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 76.9 ms