RNA–Protein interactions for RNA: ENST00000624193.1

ATRX-215, Transcript of ATRX, chromatin remodeler, human

TSL 4

Gene ATRX, Length 463 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATRX-215	ENST00000624193	MT1G	P13640	62 aa		5.57	□□□□□ -1.52
ATRX-215	ENST00000624193		Q1T7F1	81 aa		5.57	□□□□□ -1.52
ATRX-215	ENST00000624193	C10orf95	Q9H7T3	257 aa		5.57	□□□□□ -1.52
ATRX-215	ENST00000624193	PSPHP1	O15172	72 aa		5.53	□□□□□ -1.52
ATRX-215	ENST00000624193	PP632	Q6XCG6	107 aa		5.53	□□□□□ -1.52
ATRX-215	ENST00000624193	AHNAK2	Q8IVF2	5795 aa		5.53	□□□□□ -1.52
ATRX-215	ENST00000624193	KRTAP19-5	Q3LI72	72 aa		5.52	□□□□□ -1.53
ATRX-215	ENST00000624193	KRTAP5-10	Q6L8G5	202 aa		5.52	□□□□□ -1.53
ATRX-215	ENST00000624193		V9GYY9	64 aa		5.51	□□□□□ -1.53
ATRX-215	ENST00000624193	MIR22HG	Q0VDD5	57 aa		5.5	□□□□□ -1.53
ATRX-215	ENST00000624193	MT1M	Q8N339	61 aa		5.49	□□□□□ -1.53
ATRX-215	ENST00000624193	RPS28	P62857	69 aa	Known RBP	5.45	□□□□□ -1.54
ATRX-215	ENST00000624193	KRTAP5-4	Q6L8H1	288 aa		5.44	□□□□□ -1.54
ATRX-215	ENST00000624193	KRTAP4-12	Q9BQ66	201 aa		5.43	□□□□□ -1.54
ATRX-215	ENST00000624193	KRTAP9-9	Q9BYP9	154 aa		5.42	□□□□□ -1.54
ATRX-215	ENST00000624193	KRTAP9-4	Q9BYQ2	154 aa		5.42	□□□□□ -1.54
ATRX-215	ENST00000624193	LCE3A	Q5TA76	89 aa		5.41	□□□□□ -1.54
ATRX-215	ENST00000624193	MT1L	Q93083	61 aa		5.41	□□□□□ -1.54
ATRX-215	ENST00000624193	TNP1	P09430	55 aa		5.4	□□□□□ -1.54
ATRX-215	ENST00000624193	KRTAP4-3	Q9BYR4	195 aa		5.39	□□□□□ -1.55
ATRX-215	ENST00000624193	KRTAP5-7	Q6L8G8	165 aa		5.36	□□□□□ -1.55
ATRX-215	ENST00000624193		A6NED7	52 aa		5.31	□□□□□ -1.56
ATRX-215	ENST00000624193	KRTAP5-3	Q6L8H2	238 aa		5.31	□□□□□ -1.56
ATRX-215	ENST00000624193	KRTAP4-7	Q9BYR0	210 aa		5.27	□□□□□ -1.57
ATRX-215	ENST00000624193		K7ERS5	55 aa		5.24	□□□□□ -1.57
ATRX-215	ENST00000624193	KRTAP25-1	Q3LHN0	102 aa		5.22	□□□□□ -1.57
ATRX-215	ENST00000624193	KRTAP12-3	P60328	96 aa		5.17	□□□□□ -1.58
ATRX-215	ENST00000624193	KRTAP20-2	Q3LI61	65 aa		5.17	□□□□□ -1.58
ATRX-215	ENST00000624193	SPRR5	A0A1B0GTR4	108 aa		5.14	□□□□□ -1.59
ATRX-215	ENST00000624193	CDC42SE1	Q9NRR8	79 aa		5.14	□□□□□ -1.59
ATRX-215	ENST00000624193	KRTAP5-5	Q701N2	237 aa	Predicted RBP	5.06	□□□□□ -1.6
ATRX-215	ENST00000624193	ROMO1	P60602	79 aa		5.04	□□□□□ -1.6
ATRX-215	ENST00000624193	KRTAP23-1	A1A580	65 aa		5.03	□□□□□ -1.6
ATRX-215	ENST00000624193	KRTAP4-2	Q9BYR5	136 aa		5.03	□□□□□ -1.6
ATRX-215	ENST00000624193	KRTAP12-4	P60329	112 aa		5.02	□□□□□ -1.61
ATRX-215	ENST00000624193	SYNE1	Q8NF91	8797 aa	Known RBP	4.9	□□□□□ -1.63
ATRX-215	ENST00000624193	KRTAP15-1	Q3LI76	137 aa		4.88	□□□□□ -1.63
ATRX-215	ENST00000624193	KRTAP4-11	Q9BYQ6	195 aa		4.82	□□□□□ -1.64
ATRX-215	ENST00000624193	KRTAP19-4	Q3LI73	84 aa		4.8	□□□□□ -1.64
ATRX-215	ENST00000624193	LCE3C	Q5T5A8	94 aa		4.79	□□□□□ -1.64
ATRX-215	ENST00000624193	BRK1	Q8WUW1	75 aa		4.79	□□□□□ -1.64
ATRX-215	ENST00000624193	KRTAP5-2	Q701N4	177 aa		4.7	□□□□□ -1.66
ATRX-215	ENST00000624193	KRTAP5-8	O75690	187 aa		4.67	□□□□□ -1.66
ATRX-215	ENST00000624193	AHNAK	Q09666	5890 aa	Known RBP	4.66	□□□□□ -1.66
ATRX-215	ENST00000624193	MUC5AC	P98088	5654 aa		4.64	□□□□□ -1.67
ATRX-215	ENST00000624193	KRTAP9-6	A8MVA2	160 aa		4.62	□□□□□ -1.67
ATRX-215	ENST00000624193	MT1A	P04731	61 aa		4.6	□□□□□ -1.67
ATRX-215	ENST00000624193	KRTAP6-1	Q3LI64	71 aa		4.6	□□□□□ -1.67
ATRX-215	ENST00000624193	MUC5B	Q9HC84	5762 aa	Predicted RBP	4.56	□□□□□ -1.68
ATRX-215	ENST00000624193	PMAIP1	Q13794	54 aa		4.48	□□□□□ -1.69
ATRX-215	ENST00000624193	KRTAP6-2	Q3LI66	62 aa		4.48	□□□□□ -1.69
ATRX-215	ENST00000624193	OBSCN	Q5VST9	7968 aa		4.47	□□□□□ -1.69
ATRX-215	ENST00000624193	PRAC1	Q96KF2	57 aa		4.37	□□□□□ -1.71
ATRX-215	ENST00000624193	PRO0628	Q9UI54	55 aa		4.35	□□□□□ -1.71
ATRX-215	ENST00000624193	KRTAP5-1	Q6L8H4	278 aa		4.29	□□□□□ -1.72
ATRX-215	ENST00000624193	MT3	P25713	68 aa		4.22	□□□□□ -1.73
ATRX-215	ENST00000624193	KTN1-AS1	Q86SY8	53 aa		4.12	□□□□□ -1.75
ATRX-215	ENST00000624193	LCE1E	Q5T753	118 aa		3.95	□□□□□ -1.78
ATRX-215	ENST00000624193		H3BS24	57 aa		3.87	□□□□□ -1.79
ATRX-215	ENST00000624193	SVIP	Q8NHG7	77 aa		3.86	□□□□□ -1.79
ATRX-215	ENST00000624193	LCE1B	Q5T7P3	118 aa		3.79	□□□□□ -1.8
ATRX-215	ENST00000624193	LCE1C	Q5T751	118 aa		3.67	□□□□□ -1.82
ATRX-215	ENST00000624193	LUZP6	Q538Z0	58 aa		3.49	□□□□□ -1.85
ATRX-215	ENST00000624193	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.48	□□□□□ -1.85
ATRX-215	ENST00000624193	LCE3D	Q9BYE3	92 aa		3.46	□□□□□ -1.86
ATRX-215	ENST00000624193	KRTAP5-11	Q6L8G4	156 aa		3.39	□□□□□ -1.87
ATRX-215	ENST00000624193	LCE1F	Q5T754	118 aa		3.35	□□□□□ -1.87
ATRX-215	ENST00000624193	LCE3E	Q5T5B0	92 aa		3.28	□□□□□ -1.88
ATRX-215	ENST00000624193	PHGR1	C9JFL3	82 aa		3.25	□□□□□ -1.89
ATRX-215	ENST00000624193	NDUFAF8	A1L188	74 aa		3.07	□□□□□ -1.92
ATRX-215	ENST00000624193	KRTAP21-2	Q3LI59	83 aa		3.03	□□□□□ -1.92
ATRX-215	ENST00000624193	KRTAP4-4	Q9BYR3	166 aa		2.89	□□□□□ -1.95
ATRX-215	ENST00000624193	MUC19	Q7Z5P9	8384 aa		2.79	□□□□□ -1.96
ATRX-215	ENST00000624193	PRM1	P04553	51 aa		2.61	□□□□□ -1.99
ATRX-215	ENST00000624193	KRTAP21-1	Q3LI58	79 aa		2.46	□□□□□ -2.02
ATRX-215	ENST00000624193	INE1	O15225	51 aa		2.43	□□□□□ -2.02
ATRX-215	ENST00000624193		A0A0A0MQY5	61 aa		2.39	□□□□□ -2.03
ATRX-215	ENST00000624193	MUC16	Q8WXI7	14507 aa		1.95	□□□□□ -2.1

Retrieved 78 of 20,778 RNA–protein pairs in 129.3 ms