RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 SSPOA2VEC9 5147 aa3.3□□□□□ -1.88
SND1-IT1-201ENST00000623342 KRTAP10-12P60413 245 aa3.28□□□□□ -1.88
SND1-IT1-201ENST00000623342 PRO2289Q9P1D8 64 aa3.28□□□□□ -1.88
SND1-IT1-201ENST00000623342 KRTAP10-7P60409 375 aaPredicted RBP3.26□□□□□ -1.89
SND1-IT1-201ENST00000623342 A0A0A0MQY5 61 aa3.24□□□□□ -1.89
SND1-IT1-201ENST00000623342 KRTAP4-11Q9BYQ6 195 aa3.24□□□□□ -1.89
SND1-IT1-201ENST00000623342 KRTAP12-3P60328 96 aa3.23□□□□□ -1.89
SND1-IT1-201ENST00000623342 KRTAP19-5Q3LI72 72 aa3.11□□□□□ -1.91
SND1-IT1-201ENST00000623342 FCGBPQ9Y6R7 5405 aaPredicted RBP3.09□□□□□ -1.91
SND1-IT1-201ENST00000623342 MUC12Q9UKN1 5478 aa3.04□□□□□ -1.92
SND1-IT1-201ENST00000623342 LCE3CQ5T5A8 94 aa3.03□□□□□ -1.92
SND1-IT1-201ENST00000623342 MACF1Q9UPN3 7388 aaKnown RBP3.01□□□□□ -1.93
SND1-IT1-201ENST00000623342 SYNE2Q8WXH0 6885 aaKnown RBP3.01□□□□□ -1.93
SND1-IT1-201ENST00000623342 KRTAP19-7Q3SYF9 63 aa2.99□□□□□ -1.93
SND1-IT1-201ENST00000623342 KRTAP19-6Q3LI70 58 aa2.96□□□□□ -1.94
SND1-IT1-201ENST00000623342 MT1EP04732 61 aa2.93□□□□□ -1.94
SND1-IT1-201ENST00000623342 DSTQ03001 7570 aaKnown RBP2.92□□□□□ -1.94
SND1-IT1-201ENST00000623342 MT1LQ93083 61 aa2.91□□□□□ -1.94
SND1-IT1-201ENST00000623342 KRTAP9-6A8MVA2 160 aa2.9□□□□□ -1.95
SND1-IT1-201ENST00000623342 MDN1Q9NU22 5596 aa2.88□□□□□ -1.95
SND1-IT1-201ENST00000623342 INE1O15225 51 aa2.87□□□□□ -1.95
SND1-IT1-201ENST00000623342 KRTAP2-3P0C7H8 128 aa2.79□□□□□ -1.96
SND1-IT1-201ENST00000623342 KRTAP2-4Q9BYR9 128 aa2.79□□□□□ -1.96
SND1-IT1-201ENST00000623342 KRTAP2-1Q9BYU5 128 aa2.79□□□□□ -1.96
SND1-IT1-201ENST00000623342 KRTAP4-3Q9BYR4 195 aa2.77□□□□□ -1.97
SND1-IT1-201ENST00000623342 KRTAP19-3Q7Z4W3 81 aa2.75□□□□□ -1.97
SND1-IT1-201ENST00000623342 MT1GP13640 62 aa2.75□□□□□ -1.97
SND1-IT1-201ENST00000623342 CRCT1Q9UGL9 99 aa2.75□□□□□ -1.97
SND1-IT1-201ENST00000623342 MT1MQ8N339 61 aa2.74□□□□□ -1.97
SND1-IT1-201ENST00000623342 SPRR2FQ96RM1 72 aa2.71□□□□□ -1.97
SND1-IT1-201ENST00000623342 SYNE1Q8NF91 8797 aaKnown RBP2.64□□□□□ -1.99
SND1-IT1-201ENST00000623342 LCE1AQ5T7P2 110 aa2.64□□□□□ -1.99
SND1-IT1-201ENST00000623342 KRTAP5-9P26371 169 aa2.57□□□□□ -2
SND1-IT1-201ENST00000623342 OBSCNQ5VST9 7968 aa2.51□□□□□ -2.01
SND1-IT1-201ENST00000623342 SPRR2EP22531 72 aa2.51□□□□□ -2.01
SND1-IT1-201ENST00000623342 SPRR2BP35325 72 aa2.51□□□□□ -2.01
SND1-IT1-201ENST00000623342 SPRR2AP35326 72 aa2.51□□□□□ -2.01
SND1-IT1-201ENST00000623342 HMCN1Q96RW7 5635 aa2.49□□□□□ -2.01
SND1-IT1-201ENST00000623342 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.48□□□□□ -2.01
SND1-IT1-201ENST00000623342 NEBP20929 6669 aa2.46□□□□□ -2.02
SND1-IT1-201ENST00000623342 MT1AP04731 61 aa2.46□□□□□ -2.02
SND1-IT1-201ENST00000623342 MT3P25713 68 aa2.46□□□□□ -2.02
SND1-IT1-201ENST00000623342 KRTAP6-1Q3LI64 71 aa2.46□□□□□ -2.02
SND1-IT1-201ENST00000623342 KRTAP2-2Q9BYT5 123 aa2.44□□□□□ -2.02
SND1-IT1-201ENST00000623342 KRTAP12-4P60329 112 aa2.44□□□□□ -2.02
SND1-IT1-201ENST00000623342 KRTAP6-3Q3LI67 103 aa2.44□□□□□ -2.02
SND1-IT1-201ENST00000623342 KRTAP5-5Q701N2 237 aaPredicted RBP2.43□□□□□ -2.02
SND1-IT1-201ENST00000623342 SPRR2DP22532 72 aa2.4□□□□□ -2.03
SND1-IT1-201ENST00000623342 LCE3DQ9BYE3 92 aa2.32□□□□□ -2.04
SND1-IT1-201ENST00000623342 LCE3EQ5T5B0 92 aa2.29□□□□□ -2.04
SND1-IT1-201ENST00000623342 LCE1EQ5T753 118 aa2.22□□□□□ -2.05
SND1-IT1-201ENST00000623342 KRTAP6-2Q3LI66 62 aa2.22□□□□□ -2.05
SND1-IT1-201ENST00000623342 GPR98Q8WXG9 6306 aa2.2□□□□□ -2.06
SND1-IT1-201ENST00000623342 KRTAP5-4Q6L8H1 288 aa2.18□□□□□ -2.06
SND1-IT1-201ENST00000623342 MT4P47944 62 aa2.18□□□□□ -2.06
SND1-IT1-201ENST00000623342 KRTAP5-11Q6L8G4 156 aa2.15□□□□□ -2.06
SND1-IT1-201ENST00000623342 LCE1FQ5T754 118 aa2.15□□□□□ -2.07
SND1-IT1-201ENST00000623342 PRM1P04553 51 aa2.14□□□□□ -2.07
SND1-IT1-201ENST00000623342 KRTAP20-2Q3LI61 65 aa2.07□□□□□ -2.08
SND1-IT1-201ENST00000623342 KRTAP20-1Q3LI63 56 aa2.05□□□□□ -2.08
SND1-IT1-201ENST00000623342 MUC5BQ9HC84 5762 aaPredicted RBP2.05□□□□□ -2.08
SND1-IT1-201ENST00000623342 KRTAP5-2Q701N4 177 aa2.03□□□□□ -2.08
SND1-IT1-201ENST00000623342 KRTAP5-1Q6L8H4 278 aa2.02□□□□□ -2.09
SND1-IT1-201ENST00000623342 KRTAP4-4Q9BYR3 166 aa1.99□□□□□ -2.09
SND1-IT1-201ENST00000623342 MUC5ACP98088 5654 aa1.88□□□□□ -2.11
SND1-IT1-201ENST00000623342 AHNAK2Q8IVF2 5795 aa1.84□□□□□ -2.11
SND1-IT1-201ENST00000623342 AHNAKQ09666 5890 aaKnown RBP1.8□□□□□ -2.12
SND1-IT1-201ENST00000623342 LCE1BQ5T7P3 118 aa1.77□□□□□ -2.13
SND1-IT1-201ENST00000623342 KRTAP5-10Q6L8G5 202 aa1.74□□□□□ -2.13
SND1-IT1-201ENST00000623342 LCE1CQ5T751 118 aa1.73□□□□□ -2.13
SND1-IT1-201ENST00000623342 KRTAP5-8O75690 187 aa1.71□□□□□ -2.14
SND1-IT1-201ENST00000623342 KRTAP5-7Q6L8G8 165 aa1.62□□□□□ -2.15
SND1-IT1-201ENST00000623342 KRTAP21-2Q3LI59 83 aa1.6□□□□□ -2.15
SND1-IT1-201ENST00000623342 MUC19Q7Z5P9 8384 aa1.53□□□□□ -2.16
SND1-IT1-201ENST00000623342 KRTAP21-1Q3LI58 79 aa1.34□□□□□ -2.19
SND1-IT1-201ENST00000623342 PHGR1C9JFL3 82 aa1.29□□□□□ -2.2
SND1-IT1-201ENST00000623342 MUC16Q8WXI7 14507 aa0.86□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 484.4 ms