RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 PP632Q6XCG6 107 aa7.27□□□□□ -1.25
PDLIM2-221ENST00000622702 SPRR2DP22532 72 aa7.26□□□□□ -1.25
PDLIM2-221ENST00000622702 KRTAP2-3P0C7H8 128 aa7.25□□□□□ -1.25
PDLIM2-221ENST00000622702 KRTAP2-4Q9BYR9 128 aa7.25□□□□□ -1.25
PDLIM2-221ENST00000622702 KRTAP12-3P60328 96 aa7.24□□□□□ -1.25
PDLIM2-221ENST00000622702 KRTAP19-3Q7Z4W3 81 aa7.12□□□□□ -1.27
PDLIM2-221ENST00000622702 MT1LQ93083 61 aa7.09□□□□□ -1.27
PDLIM2-221ENST00000622702 LCE5AQ5TCM9 118 aa7.08□□□□□ -1.28
PDLIM2-221ENST00000622702 LCE3BQ5TA77 95 aa7.04□□□□□ -1.28
PDLIM2-221ENST00000622702 KRTAP2-2Q9BYT5 123 aa7.04□□□□□ -1.28
PDLIM2-221ENST00000622702 KRTAP2-1Q9BYU5 128 aa7.04□□□□□ -1.28
PDLIM2-221ENST00000622702 MT1GP13640 62 aa7.03□□□□□ -1.28
PDLIM2-221ENST00000622702 KRTAP15-1Q3LI76 137 aa6.98□□□□□ -1.29
PDLIM2-221ENST00000622702 PRAC1Q96KF2 57 aa6.94□□□□□ -1.3
PDLIM2-221ENST00000622702 DSTQ03001 7570 aaKnown RBP6.94□□□□□ -1.3
PDLIM2-221ENST00000622702 KTN1-AS1Q86SY8 53 aa6.92□□□□□ -1.3
PDLIM2-221ENST00000622702 MT1MQ8N339 61 aa6.91□□□□□ -1.3
PDLIM2-221ENST00000622702 KRTAP19-4Q3LI73 84 aa6.9□□□□□ -1.31
PDLIM2-221ENST00000622702 SVIPQ8NHG7 77 aa6.84□□□□□ -1.31
PDLIM2-221ENST00000622702 KRTAP4-7Q9BYR0 210 aa6.76□□□□□ -1.33
PDLIM2-221ENST00000622702 LCE3CQ5T5A8 94 aa6.73□□□□□ -1.33
PDLIM2-221ENST00000622702 KRTAP4-3Q9BYR4 195 aa6.71□□□□□ -1.34
PDLIM2-221ENST00000622702 KRTAP4-9Q9BYQ8 210 aa6.48□□□□□ -1.37
PDLIM2-221ENST00000622702 LCE4AQ5TA78 99 aa6.42□□□□□ -1.38
PDLIM2-221ENST00000622702 LOC100996750A0A140TA64 210 aa6.36□□□□□ -1.39
PDLIM2-221ENST00000622702 LCE1DQ5T752 114 aa6.35□□□□□ -1.39
PDLIM2-221ENST00000622702 KRTAP5-4Q6L8H1 288 aa6.35□□□□□ -1.39
PDLIM2-221ENST00000622702 KRTAP9-6A8MVA2 160 aa6.34□□□□□ -1.4
PDLIM2-221ENST00000622702 MT4P47944 62 aa6.34□□□□□ -1.4
PDLIM2-221ENST00000622702 KRTAP5-5Q701N2 237 aaPredicted RBP6.29□□□□□ -1.4
PDLIM2-221ENST00000622702 HMCN1Q96RW7 5635 aa6.27□□□□□ -1.41
PDLIM2-221ENST00000622702 SPRR5A0A1B0GTR4 108 aa6.25□□□□□ -1.41
PDLIM2-221ENST00000622702 KRTAP4-6Q9BYQ5 205 aa6.19□□□□□ -1.42
PDLIM2-221ENST00000622702 MT1AP04731 61 aa6.04□□□□□ -1.44
PDLIM2-221ENST00000622702 SYNE1Q8NF91 8797 aaKnown RBP6.03□□□□□ -1.44
PDLIM2-221ENST00000622702 GPR98Q8WXG9 6306 aa6.03□□□□□ -1.44
PDLIM2-221ENST00000622702 KRTAP12-4P60329 112 aa6.02□□□□□ -1.44
PDLIM2-221ENST00000622702 KRTAP20-2Q3LI61 65 aa5.99□□□□□ -1.45
PDLIM2-221ENST00000622702 KRTAP6-1Q3LI64 71 aa5.96□□□□□ -1.46
PDLIM2-221ENST00000622702 AHNAK2Q8IVF2 5795 aa5.93□□□□□ -1.46
PDLIM2-221ENST00000622702 KRTAP5-3Q6L8H2 238 aa5.8□□□□□ -1.48
PDLIM2-221ENST00000622702 LUZP6Q538Z0 58 aa5.77□□□□□ -1.49
PDLIM2-221ENST00000622702 KRTAP9-4Q9BYQ2 154 aa5.77□□□□□ -1.49
PDLIM2-221ENST00000622702 KRTAP5-10Q6L8G5 202 aa5.73□□□□□ -1.49
PDLIM2-221ENST00000622702 KRTAP5-2Q701N4 177 aa5.62□□□□□ -1.51
PDLIM2-221ENST00000622702 KRTAP6-2Q3LI66 62 aa5.57□□□□□ -1.52
PDLIM2-221ENST00000622702 MT3P25713 68 aa5.5□□□□□ -1.53
PDLIM2-221ENST00000622702 KRTAP5-7Q6L8G8 165 aa5.46□□□□□ -1.53
PDLIM2-221ENST00000622702 KRTAP4-11Q9BYQ6 195 aa5.39□□□□□ -1.55
PDLIM2-221ENST00000622702 OBSCNQ5VST9 7968 aa5.32□□□□□ -1.56
PDLIM2-221ENST00000622702 NDUFAF8A1L188 74 aa5.26□□□□□ -1.57
PDLIM2-221ENST00000622702 KRTAP5-8O75690 187 aa5.2□□□□□ -1.58
PDLIM2-221ENST00000622702 KRTAP5-1Q6L8H4 278 aa4.99□□□□□ -1.61
PDLIM2-221ENST00000622702 LCE3DQ9BYE3 92 aa4.97□□□□□ -1.61
PDLIM2-221ENST00000622702 LCE1EQ5T753 118 aa4.92□□□□□ -1.62
PDLIM2-221ENST00000622702 MUC5ACP98088 5654 aa4.92□□□□□ -1.62
PDLIM2-221ENST00000622702 KRTAP9-9Q9BYP9 154 aa4.88□□□□□ -1.63
PDLIM2-221ENST00000622702 MUC5BQ9HC84 5762 aaPredicted RBP4.82□□□□□ -1.64
PDLIM2-221ENST00000622702 AHNAKQ09666 5890 aaKnown RBP4.79□□□□□ -1.64
PDLIM2-221ENST00000622702 LCE3EQ5T5B0 92 aa4.78□□□□□ -1.64
PDLIM2-221ENST00000622702 H3BS24 57 aa4.74□□□□□ -1.65
PDLIM2-221ENST00000622702 LCE1BQ5T7P3 118 aa4.61□□□□□ -1.67
PDLIM2-221ENST00000622702 KRTAP4-2Q9BYR5 136 aa4.59□□□□□ -1.67
PDLIM2-221ENST00000622702 LCE1CQ5T751 118 aa4.56□□□□□ -1.68
PDLIM2-221ENST00000622702 A0A0A0MQY5 61 aa4.49□□□□□ -1.69
PDLIM2-221ENST00000622702 INE1O15225 51 aa4.36□□□□□ -1.71
PDLIM2-221ENST00000622702 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.24□□□□□ -1.73
PDLIM2-221ENST00000622702 KRTAP5-11Q6L8G4 156 aa4.08□□□□□ -1.76
PDLIM2-221ENST00000622702 KRTAP4-12Q9BQ66 201 aa4.08□□□□□ -1.76
PDLIM2-221ENST00000622702 PRM1P04553 51 aa3.93□□□□□ -1.78
PDLIM2-221ENST00000622702 KRTAP21-2Q3LI59 83 aa3.93□□□□□ -1.78
PDLIM2-221ENST00000622702 LCE1FQ5T754 118 aa3.89□□□□□ -1.79
PDLIM2-221ENST00000622702 PHGR1C9JFL3 82 aa3.52□□□□□ -1.85
PDLIM2-221ENST00000622702 KRTAP4-4Q9BYR3 166 aa3.52□□□□□ -1.85
PDLIM2-221ENST00000622702 MUC19Q7Z5P9 8384 aa3.26□□□□□ -1.89
PDLIM2-221ENST00000622702 KRTAP21-1Q3LI58 79 aa2.52□□□□□ -2.01
PDLIM2-221ENST00000622702 MUC16Q8WXI7 14507 aa2.26□□□□□ -2.05
Retrieved 77 of 20,778 RNA–protein pairs in 92.9 ms