RNA–Protein interactions for RNA: ENST00000622680.1

LINC00963-214, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 781 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-214ENST00000622680 CAMK2N1Q7Z7J9 78 aa4.08□□□□□ -1.76
LINC00963-214ENST00000622680 AHNAK2Q8IVF2 5795 aa4.07□□□□□ -1.76
LINC00963-214ENST00000622680 PSPHP1O15172 72 aa4.07□□□□□ -1.76
LINC00963-214ENST00000622680 Q1T7F1 81 aa4.07□□□□□ -1.76
LINC00963-214ENST00000622680 SPINT4Q6UDR6 99 aa4.07□□□□□ -1.76
LINC00963-214ENST00000622680 MT4P47944 62 aa4.03□□□□□ -1.76
LINC00963-214ENST00000622680 A8MU10 97 aa4□□□□□ -1.77
LINC00963-214ENST00000622680 KTN1-AS1Q86SY8 53 aa3.98□□□□□ -1.77
LINC00963-214ENST00000622680 UQCR11O14957 56 aa3.97□□□□□ -1.77
LINC00963-214ENST00000622680 LCE4AQ5TA78 99 aa3.97□□□□□ -1.77
LINC00963-214ENST00000622680 MT1GP13640 62 aa3.96□□□□□ -1.78
LINC00963-214ENST00000622680 KRTAP19-5Q3LI72 72 aa3.96□□□□□ -1.78
LINC00963-214ENST00000622680 KRTAP12-1P59990 96 aa3.94□□□□□ -1.78
LINC00963-214ENST00000622680 MT1MQ8N339 61 aa3.94□□□□□ -1.78
LINC00963-214ENST00000622680 A6NED7 52 aa3.93□□□□□ -1.78
LINC00963-214ENST00000622680 MIR22HGQ0VDD5 57 aa3.93□□□□□ -1.78
LINC00963-214ENST00000622680 KRTAP5-10Q6L8G5 202 aa3.93□□□□□ -1.78
LINC00963-214ENST00000622680 A0A0A0MQY5 61 aa3.92□□□□□ -1.78
LINC00963-214ENST00000622680 PP632Q6XCG6 107 aa3.92□□□□□ -1.78
LINC00963-214ENST00000622680 KRTAP4-3Q9BYR4 195 aa3.89□□□□□ -1.79
LINC00963-214ENST00000622680 MT1LQ93083 61 aa3.88□□□□□ -1.79
LINC00963-214ENST00000622680 KRTAP5-4Q6L8H1 288 aa3.87□□□□□ -1.79
LINC00963-214ENST00000622680 KRTAP23-1A1A580 65 aa3.86□□□□□ -1.79
LINC00963-214ENST00000622680 K7ERS5 55 aa3.83□□□□□ -1.8
LINC00963-214ENST00000622680 CDC42SE1Q9NRR8 79 aa3.83□□□□□ -1.8
LINC00963-214ENST00000622680 KRTAP5-7Q6L8G8 165 aa3.78□□□□□ -1.8
LINC00963-214ENST00000622680 KRTAP5-3Q6L8H2 238 aa3.77□□□□□ -1.81
LINC00963-214ENST00000622680 C10orf95Q9H7T3 257 aa3.77□□□□□ -1.81
LINC00963-214ENST00000622680 TNP1P09430 55 aa3.76□□□□□ -1.81
LINC00963-214ENST00000622680 LCE3AQ5TA76 89 aa3.76□□□□□ -1.81
LINC00963-214ENST00000622680 KRTAP4-7Q9BYR0 210 aa3.72□□□□□ -1.81
LINC00963-214ENST00000622680 KRTAP20-2Q3LI61 65 aa3.69□□□□□ -1.82
LINC00963-214ENST00000622680 SPRR5A0A1B0GTR4 108 aa3.65□□□□□ -1.83
LINC00963-214ENST00000622680 KRTAP5-5Q701N2 237 aaPredicted RBP3.62□□□□□ -1.83
LINC00963-214ENST00000622680 ROMO1P60602 79 aa3.6□□□□□ -1.83
LINC00963-214ENST00000622680 KRTAP25-1Q3LHN0 102 aa3.6□□□□□ -1.83
LINC00963-214ENST00000622680 SYNE1Q8NF91 8797 aaKnown RBP3.58□□□□□ -1.84
LINC00963-214ENST00000622680 KRTAP12-3P60328 96 aa3.58□□□□□ -1.84
LINC00963-214ENST00000622680 KRTAP12-4P60329 112 aa3.55□□□□□ -1.84
LINC00963-214ENST00000622680 PRAC1Q96KF2 57 aa3.55□□□□□ -1.84
LINC00963-214ENST00000622680 KRTAP4-12Q9BQ66 201 aa3.53□□□□□ -1.84
LINC00963-214ENST00000622680 KRTAP9-9Q9BYP9 154 aa3.49□□□□□ -1.85
LINC00963-214ENST00000622680 KRTAP9-4Q9BYQ2 154 aa3.49□□□□□ -1.85
LINC00963-214ENST00000622680 KRTAP19-4Q3LI73 84 aa3.43□□□□□ -1.86
LINC00963-214ENST00000622680 KRTAP4-11Q9BYQ6 195 aa3.42□□□□□ -1.86
LINC00963-214ENST00000622680 AHNAKQ09666 5890 aaKnown RBP3.38□□□□□ -1.87
LINC00963-214ENST00000622680 MUC5ACP98088 5654 aa3.37□□□□□ -1.87
LINC00963-214ENST00000622680 KRTAP5-2Q701N4 177 aa3.36□□□□□ -1.87
LINC00963-214ENST00000622680 MUC5BQ9HC84 5762 aaPredicted RBP3.36□□□□□ -1.87
LINC00963-214ENST00000622680 KRTAP15-1Q3LI76 137 aa3.33□□□□□ -1.88
LINC00963-214ENST00000622680 KRTAP5-8O75690 187 aa3.32□□□□□ -1.88
LINC00963-214ENST00000622680 KRTAP6-1Q3LI64 71 aa3.32□□□□□ -1.88
LINC00963-214ENST00000622680 MT1AP04731 61 aa3.29□□□□□ -1.88
LINC00963-214ENST00000622680 OBSCNQ5VST9 7968 aa3.27□□□□□ -1.89
LINC00963-214ENST00000622680 LCE3CQ5T5A8 94 aa3.26□□□□□ -1.89
LINC00963-214ENST00000622680 KRTAP4-2Q9BYR5 136 aa3.25□□□□□ -1.89
LINC00963-214ENST00000622680 KRTAP6-2Q3LI66 62 aa3.21□□□□□ -1.9
LINC00963-214ENST00000622680 NDUFAF8A1L188 74 aa3.17□□□□□ -1.9
LINC00963-214ENST00000622680 KRTAP9-6A8MVA2 160 aa3.14□□□□□ -1.91
LINC00963-214ENST00000622680 LUZP6Q538Z0 58 aa3.13□□□□□ -1.91
LINC00963-214ENST00000622680 KRTAP5-1Q6L8H4 278 aa3.05□□□□□ -1.92
LINC00963-214ENST00000622680 MT3P25713 68 aa2.99□□□□□ -1.93
LINC00963-214ENST00000622680 LCE1EQ5T753 118 aa2.78□□□□□ -1.96
LINC00963-214ENST00000622680 INE1O15225 51 aa2.74□□□□□ -1.97
LINC00963-214ENST00000622680 LCE1BQ5T7P3 118 aa2.71□□□□□ -1.98
LINC00963-214ENST00000622680 LCE1CQ5T751 118 aa2.6□□□□□ -1.99
LINC00963-214ENST00000622680 LCE1FQ5T754 118 aa2.51□□□□□ -2.01
LINC00963-214ENST00000622680 KRTAP5-11Q6L8G4 156 aa2.4□□□□□ -2.03
LINC00963-214ENST00000622680 LCE3DQ9BYE3 92 aa2.39□□□□□ -2.03
LINC00963-214ENST00000622680 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.34□□□□□ -2.03
LINC00963-214ENST00000622680 PHGR1C9JFL3 82 aa2.3□□□□□ -2.04
LINC00963-214ENST00000622680 LCE3EQ5T5B0 92 aa2.27□□□□□ -2.05
LINC00963-214ENST00000622680 KRTAP21-2Q3LI59 83 aa2.17□□□□□ -2.06
LINC00963-214ENST00000622680 KRTAP4-4Q9BYR3 166 aa2.07□□□□□ -2.08
LINC00963-214ENST00000622680 MUC19Q7Z5P9 8384 aa2.05□□□□□ -2.08
LINC00963-214ENST00000622680 PRM1P04553 51 aa1.88□□□□□ -2.11
LINC00963-214ENST00000622680 KRTAP21-1Q3LI58 79 aa1.72□□□□□ -2.13
LINC00963-214ENST00000622680 MUC16Q8WXI7 14507 aa1.45□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 239.3 ms