RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 KRTAP9-6A0A140TA67 174 aa4.23□□□□□ -1.73
LITAF-221ENST00000622633 KRTAP9-7A8MTY7 169 aa4.23□□□□□ -1.73
LITAF-221ENST00000622633 MT1LQ93083 61 aa4.22□□□□□ -1.73
LITAF-221ENST00000622633 MT1EP04732 61 aa4.21□□□□□ -1.74
LITAF-221ENST00000622633 KRTAP9-9Q9BYP9 154 aa4.15□□□□□ -1.75
LITAF-221ENST00000622633 KRTAP9-4Q9BYQ2 154 aa4.15□□□□□ -1.75
LITAF-221ENST00000622633 KRTAP19-4Q3LI73 84 aa4.14□□□□□ -1.75
LITAF-221ENST00000622633 KRTAP12-4P60329 112 aa4.13□□□□□ -1.75
LITAF-221ENST00000622633 KRTAP2-2Q9BYT5 123 aa4.12□□□□□ -1.75
LITAF-221ENST00000622633 KRTAP4-12Q9BQ66 201 aa4.11□□□□□ -1.75
LITAF-221ENST00000622633 KRTAP19-6Q3LI70 58 aa4.1□□□□□ -1.75
LITAF-221ENST00000622633 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.09□□□□□ -1.76
LITAF-221ENST00000622633 KRTAP9-2Q9BYQ4 174 aa4.07□□□□□ -1.76
LITAF-221ENST00000622633 KRTAP4-3Q9BYR4 195 aa4.04□□□□□ -1.76
LITAF-221ENST00000622633 KRTAP6-3Q3LI67 103 aa4.03□□□□□ -1.76
LITAF-221ENST00000622633 FCGBPQ9Y6R7 5405 aaPredicted RBP4.03□□□□□ -1.76
LITAF-221ENST00000622633 LCE1AQ5T7P2 110 aa3.99□□□□□ -1.77
LITAF-221ENST00000622633 MUC12Q9UKN1 5478 aa3.98□□□□□ -1.77
LITAF-221ENST00000622633 MT1GP13640 62 aa3.97□□□□□ -1.77
LITAF-221ENST00000622633 MT1MQ8N339 61 aa3.93□□□□□ -1.78
LITAF-221ENST00000622633 KRTAP19-3Q7Z4W3 81 aa3.93□□□□□ -1.78
LITAF-221ENST00000622633 LCE3BQ5TA77 95 aa3.9□□□□□ -1.78
LITAF-221ENST00000622633 CRCT1Q9UGL9 99 aa3.9□□□□□ -1.79
LITAF-221ENST00000622633 MACF1Q9UPN3 7388 aaKnown RBP3.88□□□□□ -1.79
LITAF-221ENST00000622633 SYNE2Q8WXH0 6885 aaKnown RBP3.82□□□□□ -1.8
LITAF-221ENST00000622633 SPRR2FQ96RM1 72 aa3.79□□□□□ -1.8
LITAF-221ENST00000622633 DSTQ03001 7570 aaKnown RBP3.79□□□□□ -1.8
LITAF-221ENST00000622633 LCE1EQ5T753 118 aa3.79□□□□□ -1.8
LITAF-221ENST00000622633 LCE5AQ5TCM9 118 aa3.78□□□□□ -1.8
LITAF-221ENST00000622633 PRM1P04553 51 aa3.76□□□□□ -1.81
LITAF-221ENST00000622633 MDN1Q9NU22 5596 aa3.72□□□□□ -1.81
LITAF-221ENST00000622633 KRTAP5-5Q701N2 237 aaPredicted RBP3.67□□□□□ -1.82
LITAF-221ENST00000622633 SYNE1Q8NF91 8797 aaKnown RBP3.67□□□□□ -1.82
LITAF-221ENST00000622633 LCE1DQ5T752 114 aa3.64□□□□□ -1.83
LITAF-221ENST00000622633 KRTAP4-9Q9BYQ8 210 aa3.63□□□□□ -1.83
LITAF-221ENST00000622633 KRTAP6-1Q3LI64 71 aa3.59□□□□□ -1.83
LITAF-221ENST00000622633 MT1AP04731 61 aa3.52□□□□□ -1.85
LITAF-221ENST00000622633 LCE3EQ5T5B0 92 aa3.51□□□□□ -1.85
LITAF-221ENST00000622633 LCE1FQ5T754 118 aa3.51□□□□□ -1.85
LITAF-221ENST00000622633 LCE3DQ9BYE3 92 aa3.47□□□□□ -1.85
LITAF-221ENST00000622633 HMCN1Q96RW7 5635 aa3.46□□□□□ -1.86
LITAF-221ENST00000622633 KRTAP5-9P26371 169 aa3.45□□□□□ -1.86
LITAF-221ENST00000622633 KRTAP4-11Q9BYQ6 195 aa3.45□□□□□ -1.86
LITAF-221ENST00000622633 SPRR2EP22531 72 aa3.44□□□□□ -1.86
LITAF-221ENST00000622633 SPRR2BP35325 72 aa3.44□□□□□ -1.86
LITAF-221ENST00000622633 SPRR2AP35326 72 aa3.44□□□□□ -1.86
LITAF-221ENST00000622633 KRTAP6-2Q3LI66 62 aa3.38□□□□□ -1.87
LITAF-221ENST00000622633 KRTAP4-2Q9BYR5 136 aa3.36□□□□□ -1.87
LITAF-221ENST00000622633 OBSCNQ5VST9 7968 aa3.35□□□□□ -1.87
LITAF-221ENST00000622633 SPRR2DP22532 72 aa3.28□□□□□ -1.88
LITAF-221ENST00000622633 NEBP20929 6669 aa3.18□□□□□ -1.9
LITAF-221ENST00000622633 MT3P25713 68 aa3.17□□□□□ -1.9
LITAF-221ENST00000622633 KRTAP5-3Q6L8H2 238 aa3.16□□□□□ -1.9
LITAF-221ENST00000622633 KRTAP5-4Q6L8H1 288 aa3.01□□□□□ -1.93
LITAF-221ENST00000622633 MT4P47944 62 aa2.92□□□□□ -1.94
LITAF-221ENST00000622633 KRTAP20-2Q3LI61 65 aa2.84□□□□□ -1.95
LITAF-221ENST00000622633 KRTAP5-2Q701N4 177 aa2.82□□□□□ -1.96
LITAF-221ENST00000622633 MUC19Q7Z5P9 8384 aa2.71□□□□□ -1.97
LITAF-221ENST00000622633 MUC5ACP98088 5654 aa2.69□□□□□ -1.98
LITAF-221ENST00000622633 GPR98Q8WXG9 6306 aa2.66□□□□□ -1.98
LITAF-221ENST00000622633 KRTAP20-1Q3LI63 56 aa2.65□□□□□ -1.98
LITAF-221ENST00000622633 MUC5BQ9HC84 5762 aaPredicted RBP2.6□□□□□ -1.99
LITAF-221ENST00000622633 LCE1BQ5T7P3 118 aa2.6□□□□□ -1.99
LITAF-221ENST00000622633 LCE1CQ5T751 118 aa2.53□□□□□ -2
LITAF-221ENST00000622633 KRTAP5-10Q6L8G5 202 aa2.51□□□□□ -2.01
LITAF-221ENST00000622633 KRTAP21-1Q3LI58 79 aa2.46□□□□□ -2.02
LITAF-221ENST00000622633 KRTAP5-1Q6L8H4 278 aa2.46□□□□□ -2.02
LITAF-221ENST00000622633 KRTAP5-11Q6L8G4 156 aa2.43□□□□□ -2.02
LITAF-221ENST00000622633 AHNAK2Q8IVF2 5795 aa2.37□□□□□ -2.03
LITAF-221ENST00000622633 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.34□□□□□ -2.03
LITAF-221ENST00000622633 KRTAP21-2Q3LI59 83 aa2.31□□□□□ -2.04
LITAF-221ENST00000622633 KRTAP5-8O75690 187 aa2.27□□□□□ -2.05
LITAF-221ENST00000622633 AHNAKQ09666 5890 aaKnown RBP2.26□□□□□ -2.05
LITAF-221ENST00000622633 KRTAP4-4Q9BYR3 166 aa2.2□□□□□ -2.06
LITAF-221ENST00000622633 KRTAP5-7Q6L8G8 165 aa2.18□□□□□ -2.06
LITAF-221ENST00000622633 PHGR1C9JFL3 82 aa1.8□□□□□ -2.12
LITAF-221ENST00000622633 MUC16Q8WXI7 14507 aa1.26□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 76.9 ms