RNA–Protein interactions for RNA: ENST00000621518.4

NCAM1-229, Transcript of neural cell adhesion molecule 1, humanhuman

TSL 5 BASIC

Gene NCAM1, Length 4,922 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAM1-229ENST00000621518 RNF213Q63HN8 5207 aa3.58□□□□□ -1.84
NCAM1-229ENST00000621518 LCE3EQ5T5B0 92 aa3.56□□□□□ -1.84
NCAM1-229ENST00000621518 FAT4Q6V0I7 4981 aa3.55□□□□□ -1.84
NCAM1-229ENST00000621518 MT3P25713 68 aa3.55□□□□□ -1.84
NCAM1-229ENST00000621518 UBR4Q5T4S7 5183 aa3.51□□□□□ -1.85
NCAM1-229ENST00000621518 LCE1AQ5T7P2 110 aa3.51□□□□□ -1.85
NCAM1-229ENST00000621518 KRTAP6-3Q3LI67 103 aa3.5□□□□□ -1.85
NCAM1-229ENST00000621518 KRTAP4-7Q9BYR0 210 aa3.48□□□□□ -1.85
NCAM1-229ENST00000621518 KRTAP19-7Q3SYF9 63 aa3.46□□□□□ -1.86
NCAM1-229ENST00000621518 HMCN2Q8NDA2 5059 aa3.44□□□□□ -1.86
NCAM1-229ENST00000621518 KRTAP9-7A8MTY7 169 aa3.43□□□□□ -1.86
NCAM1-229ENST00000621518 KRTAP20-1Q3LI63 56 aa3.43□□□□□ -1.86
NCAM1-229ENST00000621518 MT4P47944 62 aa3.42□□□□□ -1.86
NCAM1-229ENST00000621518 MT1AP04731 61 aa3.4□□□□□ -1.86
NCAM1-229ENST00000621518 KRTAP2-3P0C7H8 128 aa3.37□□□□□ -1.87
NCAM1-229ENST00000621518 KRTAP2-4Q9BYR9 128 aa3.37□□□□□ -1.87
NCAM1-229ENST00000621518 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.33□□□□□ -1.88
NCAM1-229ENST00000621518 KRTAP4-3Q9BYR4 195 aa3.31□□□□□ -1.88
NCAM1-229ENST00000621518 LCE4AQ5TA78 99 aa3.29□□□□□ -1.88
NCAM1-229ENST00000621518 LOC100996750A0A140TA64 210 aa3.29□□□□□ -1.88
NCAM1-229ENST00000621518 LCE5AQ5TCM9 118 aa3.25□□□□□ -1.89
NCAM1-229ENST00000621518 KRTAP2-2Q9BYT5 123 aa3.25□□□□□ -1.89
NCAM1-229ENST00000621518 KRTAP2-1Q9BYU5 128 aa3.25□□□□□ -1.89
NCAM1-229ENST00000621518 LCE1DQ5T752 114 aa3.2□□□□□ -1.9
NCAM1-229ENST00000621518 SYNE2Q8WXH0 6885 aaKnown RBP3.2□□□□□ -1.9
NCAM1-229ENST00000621518 FSIP2Q5CZC0 6907 aa3.18□□□□□ -1.9
NCAM1-229ENST00000621518 LCE1BQ5T7P3 118 aa3.18□□□□□ -1.9
NCAM1-229ENST00000621518 MUC2Q02817 5179 aa3.17□□□□□ -1.9
NCAM1-229ENST00000621518 SYNE1Q8NF91 8797 aaKnown RBP3.16□□□□□ -1.9
NCAM1-229ENST00000621518 KRTAP9-4Q9BYQ2 154 aa3.13□□□□□ -1.91
NCAM1-229ENST00000621518 PRM1P04553 51 aa3.09□□□□□ -1.92
NCAM1-229ENST00000621518 KRTAP6-1Q3LI64 71 aa3.07□□□□□ -1.92
NCAM1-229ENST00000621518 KRTAP6-2Q3LI66 62 aa3.03□□□□□ -1.92
NCAM1-229ENST00000621518 KRTAP5-9P26371 169 aa3.02□□□□□ -1.93
NCAM1-229ENST00000621518 KRTAP4-9Q9BYQ8 210 aa2.97□□□□□ -1.93
NCAM1-229ENST00000621518 KRTAP9-6A8MVA2 160 aa2.97□□□□□ -1.93
NCAM1-229ENST00000621518 USH2AO75445 5202 aa2.96□□□□□ -1.94
NCAM1-229ENST00000621518 OBSCNQ5VST9 7968 aa2.91□□□□□ -1.94
NCAM1-229ENST00000621518 NEBP20929 6669 aa2.88□□□□□ -1.95
NCAM1-229ENST00000621518 SSPOA2VEC9 5147 aa2.86□□□□□ -1.95
NCAM1-229ENST00000621518 KRTAP9-9Q9BYP9 154 aa2.76□□□□□ -1.97
NCAM1-229ENST00000621518 FCGBPQ9Y6R7 5405 aaPredicted RBP2.74□□□□□ -1.97
NCAM1-229ENST00000621518 LCE1CQ5T751 118 aa2.7□□□□□ -1.98
NCAM1-229ENST00000621518 LCE1EQ5T753 118 aa2.7□□□□□ -1.98
NCAM1-229ENST00000621518 LCE1FQ5T754 118 aa2.7□□□□□ -1.98
NCAM1-229ENST00000621518 MACF1Q9UPN3 7388 aaKnown RBP2.7□□□□□ -1.98
NCAM1-229ENST00000621518 KRTAP20-2Q3LI61 65 aa2.69□□□□□ -1.98
NCAM1-229ENST00000621518 KRTAP4-6Q9BYQ5 205 aa2.61□□□□□ -1.99
NCAM1-229ENST00000621518 KRTAP5-4Q6L8H1 288 aa2.61□□□□□ -1.99
NCAM1-229ENST00000621518 KMT2DO14686 5537 aa2.6□□□□□ -1.99
NCAM1-229ENST00000621518 DSTQ03001 7570 aaKnown RBP2.58□□□□□ -2
NCAM1-229ENST00000621518 MDN1Q9NU22 5596 aa2.57□□□□□ -2
NCAM1-229ENST00000621518 GPR98Q8WXG9 6306 aa2.52□□□□□ -2.01
NCAM1-229ENST00000621518 MUC12Q9UKN1 5478 aa2.43□□□□□ -2.02
NCAM1-229ENST00000621518 KRTAP5-5Q701N2 237 aaPredicted RBP2.43□□□□□ -2.02
NCAM1-229ENST00000621518 KRTAP4-11Q9BYQ6 195 aa2.43□□□□□ -2.02
NCAM1-229ENST00000621518 MUC19Q7Z5P9 8384 aa2.31□□□□□ -2.04
NCAM1-229ENST00000621518 KRTAP5-3Q6L8H2 238 aa2.28□□□□□ -2.04
NCAM1-229ENST00000621518 AHNAK2Q8IVF2 5795 aa2.23□□□□□ -2.05
NCAM1-229ENST00000621518 KRTAP4-12Q9BQ66 201 aa2.17□□□□□ -2.06
NCAM1-229ENST00000621518 KRTAP4-2Q9BYR5 136 aa2.17□□□□□ -2.06
NCAM1-229ENST00000621518 KRTAP4-4Q9BYR3 166 aa2.11□□□□□ -2.07
NCAM1-229ENST00000621518 HMCN1Q96RW7 5635 aa2.1□□□□□ -2.07
NCAM1-229ENST00000621518 MUC5ACP98088 5654 aa2.1□□□□□ -2.07
NCAM1-229ENST00000621518 KRTAP5-2Q701N4 177 aa2.08□□□□□ -2.08
NCAM1-229ENST00000621518 KRTAP5-8O75690 187 aa2.02□□□□□ -2.09
NCAM1-229ENST00000621518 KRTAP5-11Q6L8G4 156 aa1.85□□□□□ -2.11
NCAM1-229ENST00000621518 KRTAP5-10Q6L8G5 202 aa1.85□□□□□ -2.11
NCAM1-229ENST00000621518 AHNAKQ09666 5890 aaKnown RBP1.83□□□□□ -2.12
NCAM1-229ENST00000621518 MUC5BQ9HC84 5762 aaPredicted RBP1.83□□□□□ -2.12
NCAM1-229ENST00000621518 KRTAP5-1Q6L8H4 278 aa1.78□□□□□ -2.13
NCAM1-229ENST00000621518 PHGR1C9JFL3 82 aa1.75□□□□□ -2.13
NCAM1-229ENST00000621518 KRTAP5-7Q6L8G8 165 aa1.7□□□□□ -2.14
NCAM1-229ENST00000621518 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.69□□□□□ -2.14
NCAM1-229ENST00000621518 KRTAP21-2Q3LI59 83 aa1.63□□□□□ -2.15
NCAM1-229ENST00000621518 KRTAP21-1Q3LI58 79 aa1.4□□□□□ -2.19
NCAM1-229ENST00000621518 MUC16Q8WXI7 14507 aa1.05□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 11.6 ms