RNA–Protein interactions for RNA: ENST00000620505.1

TARDBP-222, Transcript of TAR DNA binding protein, human

TSL 5

Gene TARDBP, Length 657 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-222	ENST00000620505	GPR98	Q8WXG9	6306 aa		3.29	□□□□□ -1.88
TARDBP-222	ENST00000620505	TMEM258	P61165	79 aa		3.28	□□□□□ -1.88
TARDBP-222	ENST00000620505	KRTAP19-7	Q3SYF9	63 aa		3.28	□□□□□ -1.88
TARDBP-222	ENST00000620505	MT1E	P04732	61 aa		3.27	□□□□□ -1.89
TARDBP-222	ENST00000620505	KRTAP19-3	Q7Z4W3	81 aa		3.26	□□□□□ -1.89
TARDBP-222	ENST00000620505	OBSCN	Q5VST9	7968 aa		3.26	□□□□□ -1.89
TARDBP-222	ENST00000620505		A0A0D9SG42	100 aa		3.21	□□□□□ -1.9
TARDBP-222	ENST00000620505	MT4	P47944	62 aa		3.19	□□□□□ -1.9
TARDBP-222	ENST00000620505	KRTAP19-5	Q3LI72	72 aa		3.19	□□□□□ -1.9
TARDBP-222	ENST00000620505	SERP1	Q9Y6X1	66 aa		3.18	□□□□□ -1.9
TARDBP-222	ENST00000620505	MT1G	P13640	62 aa		3.16	□□□□□ -1.9
TARDBP-222	ENST00000620505	SPINT4	Q6UDR6	99 aa		3.16	□□□□□ -1.9
TARDBP-222	ENST00000620505	KRTAP9-6	A8MVA2	160 aa		3.15	□□□□□ -1.91
TARDBP-222	ENST00000620505	SEC61G	P60059	68 aa		3.15	□□□□□ -1.91
TARDBP-222	ENST00000620505	SPATA8	Q6RVD6	105 aa		3.15	□□□□□ -1.91
TARDBP-222	ENST00000620505	PP632	Q6XCG6	107 aa		3.13	□□□□□ -1.91
TARDBP-222	ENST00000620505	MT1M	Q8N339	61 aa		3.13	□□□□□ -1.91
TARDBP-222	ENST00000620505		A0A1B0GU69	56 aa		3.12	□□□□□ -1.91
TARDBP-222	ENST00000620505	KRTAP4-3	Q9BYR4	195 aa		3.11	□□□□□ -1.91
TARDBP-222	ENST00000620505	MT1L	Q93083	61 aa		3.1	□□□□□ -1.91
TARDBP-222	ENST00000620505	KRTAP12-1	P59990	96 aa		3.09	□□□□□ -1.91
TARDBP-222	ENST00000620505	PRR15L	Q9BU68	103 aa		3.09	□□□□□ -1.91
TARDBP-222	ENST00000620505	LINC01558	Q9Y6Z2	57 aa		3.09	□□□□□ -1.91
TARDBP-222	ENST00000620505	RPS28	P62857	69 aa	Known RBP	3.08	□□□□□ -1.92
TARDBP-222	ENST00000620505	SMIM26	A0A096LP01	95 aa		3.07	□□□□□ -1.92
TARDBP-222	ENST00000620505		A0A1B0GU33	70 aa		3.07	□□□□□ -1.92
TARDBP-222	ENST00000620505		V9GYY9	64 aa		3.06	□□□□□ -1.92
TARDBP-222	ENST00000620505	HMCN1	Q96RW7	5635 aa		3.05	□□□□□ -1.92
TARDBP-222	ENST00000620505	KRTAP5-2	Q701N4	177 aa		3.05	□□□□□ -1.92
TARDBP-222	ENST00000620505	C10orf95	Q9H7T3	257 aa		3.05	□□□□□ -1.92
TARDBP-222	ENST00000620505		Q1T7F1	81 aa		3.04	□□□□□ -1.92
TARDBP-222	ENST00000620505	LCE3A	Q5TA76	89 aa		3.04	□□□□□ -1.92
TARDBP-222	ENST00000620505	KRTAP5-10	Q6L8G5	202 aa		3.03	□□□□□ -1.92
TARDBP-222	ENST00000620505		A8MU10	97 aa		3.01	□□□□□ -1.93
TARDBP-222	ENST00000620505	PSPHP1	O15172	72 aa		3.01	□□□□□ -1.93
TARDBP-222	ENST00000620505	PRAC1	Q96KF2	57 aa		3.01	□□□□□ -1.93
TARDBP-222	ENST00000620505	AHNAK2	Q8IVF2	5795 aa		3.01	□□□□□ -1.93
TARDBP-222	ENST00000620505	UQCR11	O14957	56 aa		2.99	□□□□□ -1.93
TARDBP-222	ENST00000620505	TNP1	P09430	55 aa		2.98	□□□□□ -1.93
TARDBP-222	ENST00000620505	MIR22HG	Q0VDD5	57 aa		2.94	□□□□□ -1.94
TARDBP-222	ENST00000620505		A6NED7	52 aa		2.93	□□□□□ -1.94
TARDBP-222	ENST00000620505	KRTAP5-7	Q6L8G8	165 aa		2.92	□□□□□ -1.94
TARDBP-222	ENST00000620505	NDUFAF8	A1L188	74 aa		2.9	□□□□□ -1.95
TARDBP-222	ENST00000620505	KRTAP12-3	P60328	96 aa		2.9	□□□□□ -1.95
TARDBP-222	ENST00000620505	KRTAP20-2	Q3LI61	65 aa		2.9	□□□□□ -1.95
TARDBP-222	ENST00000620505		K7ERS5	55 aa		2.86	□□□□□ -1.95
TARDBP-222	ENST00000620505	SPRR5	A0A1B0GTR4	108 aa		2.85	□□□□□ -1.95
TARDBP-222	ENST00000620505	KRTAP5-5	Q701N2	237 aa	Predicted RBP	2.85	□□□□□ -1.95
TARDBP-222	ENST00000620505	CDC42SE1	Q9NRR8	79 aa		2.84	□□□□□ -1.95
TARDBP-222	ENST00000620505	SYNE1	Q8NF91	8797 aa	Known RBP	2.82	□□□□□ -1.96
TARDBP-222	ENST00000620505	KRTAP12-4	P60329	112 aa		2.82	□□□□□ -1.96
TARDBP-222	ENST00000620505	LCE1F	Q5T754	118 aa		2.78	□□□□□ -1.96
TARDBP-222	ENST00000620505	BRK1	Q8WUW1	75 aa		2.77	□□□□□ -1.97
TARDBP-222	ENST00000620505	KRTAP25-1	Q3LHN0	102 aa		2.71	□□□□□ -1.98
TARDBP-222	ENST00000620505	ROMO1	P60602	79 aa		2.69	□□□□□ -1.98
TARDBP-222	ENST00000620505	LCE3C	Q5T5A8	94 aa		2.65	□□□□□ -1.99
TARDBP-222	ENST00000620505	KRTAP6-1	Q3LI64	71 aa		2.64	□□□□□ -1.99
TARDBP-222	ENST00000620505	MT1A	P04731	61 aa		2.63	□□□□□ -1.99
TARDBP-222	ENST00000620505	PMAIP1	Q13794	54 aa		2.61	□□□□□ -1.99
TARDBP-222	ENST00000620505	KRTAP5-8	O75690	187 aa		2.6	□□□□□ -1.99
TARDBP-222	ENST00000620505	PRO0628	Q9UI54	55 aa		2.6	□□□□□ -1.99
TARDBP-222	ENST00000620505	KRTAP6-2	Q3LI66	62 aa		2.56	□□□□□ -2
TARDBP-222	ENST00000620505	MUC5AC	P98088	5654 aa		2.51	□□□□□ -2.01
TARDBP-222	ENST00000620505	AHNAK	Q09666	5890 aa	Known RBP	2.49	□□□□□ -2.01
TARDBP-222	ENST00000620505	MUC5B	Q9HC84	5762 aa	Predicted RBP	2.45	□□□□□ -2.02
TARDBP-222	ENST00000620505	KTN1-AS1	Q86SY8	53 aa		2.44	□□□□□ -2.02
TARDBP-222	ENST00000620505	LCE3E	Q5T5B0	92 aa		2.39	□□□□□ -2.03
TARDBP-222	ENST00000620505	LCE1C	Q5T751	118 aa		2.36	□□□□□ -2.03
TARDBP-222	ENST00000620505	LCE1B	Q5T7P3	118 aa		2.36	□□□□□ -2.03
TARDBP-222	ENST00000620505	LUZP6	Q538Z0	58 aa		2.27	□□□□□ -2.05
TARDBP-222	ENST00000620505	MUC19	Q7Z5P9	8384 aa		2.11	□□□□□ -2.07
TARDBP-222	ENST00000620505	LCE3D	Q9BYE3	92 aa		2	□□□□□ -2.09
TARDBP-222	ENST00000620505	PHGR1	C9JFL3	82 aa		1.8	□□□□□ -2.12
TARDBP-222	ENST00000620505	KRTAP21-2	Q3LI59	83 aa		1.74	□□□□□ -2.13
TARDBP-222	ENST00000620505	INE1	O15225	51 aa		1.57	□□□□□ -2.16
TARDBP-222	ENST00000620505	PRM1	P04553	51 aa		1.39	□□□□□ -2.19
TARDBP-222	ENST00000620505	KRTAP21-1	Q3LI58	79 aa		1.33	□□□□□ -2.2
TARDBP-222	ENST00000620505	MUC16	Q8WXI7	14507 aa		1.1	□□□□□ -2.23

Retrieved 78 of 20,778 RNA–protein pairs in 81 ms