RNA–Protein interactions for RNA: ENST00000619396.4

KHSRP-213, Transcript of KH-type splicing regulatory protein, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KHSRP, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHSRP-213ENST00000619396 KRTAP2-4Q9BYR9 128 aa10.29□□□□□ -0.76
KHSRP-213ENST00000619396 KRTAP2-1Q9BYU5 128 aa10.29□□□□□ -0.76
KHSRP-213ENST00000619396 MUC12Q9UKN1 5478 aa10.1□□□□□ -0.79
KHSRP-213ENST00000619396 KRTAP4-3Q9BYR4 195 aa9.96□□□□□ -0.82
KHSRP-213ENST00000619396 KRTAP19-3Q7Z4W3 81 aa9.84□□□□□ -0.83
KHSRP-213ENST00000619396 MACF1Q9UPN3 7388 aaKnown RBP9.81□□□□□ -0.84
KHSRP-213ENST00000619396 LOC100996750A0A140TA64 210 aa9.8□□□□□ -0.84
KHSRP-213ENST00000619396 MT1MQ8N339 61 aa9.8□□□□□ -0.84
KHSRP-213ENST00000619396 SPRR2FQ96RM1 72 aa9.75□□□□□ -0.85
KHSRP-213ENST00000619396 MT1GP13640 62 aa9.74□□□□□ -0.85
KHSRP-213ENST00000619396 KRTAP9-2Q9BYQ4 174 aa9.67□□□□□ -0.86
KHSRP-213ENST00000619396 LCE5AQ5TCM9 118 aa9.58□□□□□ -0.88
KHSRP-213ENST00000619396 SYNE2Q8WXH0 6885 aaKnown RBP9.54□□□□□ -0.88
KHSRP-213ENST00000619396 CRCT1Q9UGL9 99 aa9.52□□□□□ -0.89
KHSRP-213ENST00000619396 DSTQ03001 7570 aaKnown RBP9.51□□□□□ -0.89
KHSRP-213ENST00000619396 MDN1Q9NU22 5596 aa9.33□□□□□ -0.92
KHSRP-213ENST00000619396 KRTAP5-9P26371 169 aa9.18□□□□□ -0.94
KHSRP-213ENST00000619396 LCE1AQ5T7P2 110 aa9.16□□□□□ -0.94
KHSRP-213ENST00000619396 KRTAP12-4P60329 112 aa9.04□□□□□ -0.96
KHSRP-213ENST00000619396 SPRR2EP22531 72 aa8.99□□□□□ -0.97
KHSRP-213ENST00000619396 SPRR2BP35325 72 aa8.99□□□□□ -0.97
KHSRP-213ENST00000619396 SPRR2AP35326 72 aa8.99□□□□□ -0.97
KHSRP-213ENST00000619396 LCE3BQ5TA77 95 aa8.91□□□□□ -0.98
KHSRP-213ENST00000619396 KRTAP6-1Q3LI64 71 aa8.84□□□□□ -0.99
KHSRP-213ENST00000619396 MT1AP04731 61 aa8.76□□□□□ -1.01
KHSRP-213ENST00000619396 KRTAP4-9Q9BYQ8 210 aa8.76□□□□□ -1.01
KHSRP-213ENST00000619396 KRTAP5-5Q701N2 237 aaPredicted RBP8.71□□□□□ -1.02
KHSRP-213ENST00000619396 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.7□□□□□ -1.02
KHSRP-213ENST00000619396 SYNE1Q8NF91 8797 aaKnown RBP8.66□□□□□ -1.02
KHSRP-213ENST00000619396 SPRR2DP22532 72 aa8.61□□□□□ -1.03
KHSRP-213ENST00000619396 KRTAP6-3Q3LI67 103 aa8.6□□□□□ -1.03
KHSRP-213ENST00000619396 KRTAP9-6A0A140TA67 174 aa8.48□□□□□ -1.05
KHSRP-213ENST00000619396 LCE3DQ9BYE3 92 aa8.46□□□□□ -1.06
KHSRP-213ENST00000619396 LCE3EQ5T5B0 92 aa8.35□□□□□ -1.07
KHSRP-213ENST00000619396 KRTAP9-4Q9BYQ2 154 aa8.24□□□□□ -1.09
KHSRP-213ENST00000619396 KRTAP9-7A8MTY7 169 aa8.1□□□□□ -1.11
KHSRP-213ENST00000619396 NEBP20929 6669 aa8.05□□□□□ -1.12
KHSRP-213ENST00000619396 KRTAP6-2Q3LI66 62 aa7.99□□□□□ -1.13
KHSRP-213ENST00000619396 PRM1P04553 51 aa7.98□□□□□ -1.13
KHSRP-213ENST00000619396 KRTAP5-4Q6L8H1 288 aa7.85□□□□□ -1.15
KHSRP-213ENST00000619396 MT3P25713 68 aa7.82□□□□□ -1.16
KHSRP-213ENST00000619396 OBSCNQ5VST9 7968 aa7.77□□□□□ -1.17
KHSRP-213ENST00000619396 KRTAP4-6Q9BYQ5 205 aa7.67□□□□□ -1.18
KHSRP-213ENST00000619396 MT4P47944 62 aa7.63□□□□□ -1.19
KHSRP-213ENST00000619396 LCE4AQ5TA78 99 aa7.42□□□□□ -1.22
KHSRP-213ENST00000619396 KRTAP20-2Q3LI61 65 aa7.41□□□□□ -1.22
KHSRP-213ENST00000619396 HMCN1Q96RW7 5635 aa7.32□□□□□ -1.24
KHSRP-213ENST00000619396 KRTAP5-2Q701N4 177 aa7.27□□□□□ -1.25
KHSRP-213ENST00000619396 KRTAP2-2Q9BYT5 123 aa7.26□□□□□ -1.25
KHSRP-213ENST00000619396 LCE1DQ5T752 114 aa7.25□□□□□ -1.25
KHSRP-213ENST00000619396 KRTAP5-3Q6L8H2 238 aa7.08□□□□□ -1.28
KHSRP-213ENST00000619396 KRTAP20-1Q3LI63 56 aa7.07□□□□□ -1.28
KHSRP-213ENST00000619396 MUC5ACP98088 5654 aa6.61□□□□□ -1.35
KHSRP-213ENST00000619396 LCE1EQ5T753 118 aa6.48□□□□□ -1.37
KHSRP-213ENST00000619396 LCE1BQ5T7P3 118 aa6.45□□□□□ -1.38
KHSRP-213ENST00000619396 KRTAP5-1Q6L8H4 278 aa6.26□□□□□ -1.41
KHSRP-213ENST00000619396 KRTAP4-2Q9BYR5 136 aa6.22□□□□□ -1.41
KHSRP-213ENST00000619396 KRTAP5-10Q6L8G5 202 aa6.22□□□□□ -1.41
KHSRP-213ENST00000619396 KRTAP4-11Q9BYQ6 195 aa6.22□□□□□ -1.41
KHSRP-213ENST00000619396 LCE1CQ5T751 118 aa6.13□□□□□ -1.43
KHSRP-213ENST00000619396 AHNAK2Q8IVF2 5795 aa5.99□□□□□ -1.45
KHSRP-213ENST00000619396 KRTAP5-8O75690 187 aa5.98□□□□□ -1.45
KHSRP-213ENST00000619396 KRTAP5-7Q6L8G8 165 aa5.76□□□□□ -1.49
KHSRP-213ENST00000619396 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.76□□□□□ -1.49
KHSRP-213ENST00000619396 KRTAP21-2Q3LI59 83 aa5.72□□□□□ -1.49
KHSRP-213ENST00000619396 MUC5BQ9HC84 5762 aaPredicted RBP5.36□□□□□ -1.55
KHSRP-213ENST00000619396 KRTAP5-11Q6L8G4 156 aa5.31□□□□□ -1.56
KHSRP-213ENST00000619396 KRTAP4-4Q9BYR3 166 aa5.29□□□□□ -1.56
KHSRP-213ENST00000619396 KRTAP4-12Q9BQ66 201 aa5.19□□□□□ -1.58
KHSRP-213ENST00000619396 KRTAP9-9Q9BYP9 154 aa5.11□□□□□ -1.59
KHSRP-213ENST00000619396 GPR98Q8WXG9 6306 aa5.09□□□□□ -1.59
KHSRP-213ENST00000619396 KRTAP21-1Q3LI58 79 aa5.08□□□□□ -1.6
KHSRP-213ENST00000619396 MUC19Q7Z5P9 8384 aa4.73□□□□□ -1.65
KHSRP-213ENST00000619396 PHGR1C9JFL3 82 aa4.61□□□□□ -1.67
KHSRP-213ENST00000619396 LCE1FQ5T754 118 aa4.52□□□□□ -1.69
KHSRP-213ENST00000619396 AHNAKQ09666 5890 aaKnown RBP4.2□□□□□ -1.74
KHSRP-213ENST00000619396 MUC16Q8WXI7 14507 aa3.04□□□□□ -1.92
Retrieved 77 of 20,778 RNA–protein pairs in 10.5 ms