RNA–Protein interactions for RNA: ENST00000616315.1

NEAT1-205, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 2 BASIC

Gene NEAT1, Length 483 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-205ENST00000616315 KRTAP21-1Q3LI58 79 aa0.59□□□□□ -2.31
NEAT1-205ENST00000616315 SVEP1Q4LDE5 3571 aa0.59□□□□□ -2.32
NEAT1-205ENST00000616315 EYSQ5T1H1 3165 aa0.58□□□□□ -2.32
NEAT1-205ENST00000616315 DNAH17Q9UFH2 4485 aa0.58□□□□□ -2.32
NEAT1-205ENST00000616315 DNAH5Q8TE73 4624 aa0.58□□□□□ -2.32
NEAT1-205ENST00000616315 CSMD2Q7Z408 3487 aa0.58□□□□□ -2.32
NEAT1-205ENST00000616315 VPS13CQ709C8 3753 aa0.57□□□□□ -2.32
NEAT1-205ENST00000616315 LPAP08519 4548 aa0.57□□□□□ -2.32
NEAT1-205ENST00000616315 KRTAP8-1Q8IUC2 63 aa0.56□□□□□ -2.32
NEAT1-205ENST00000616315 DYNC1H1Q14204 4646 aaKnown RBP0.55□□□□□ -2.32
NEAT1-205ENST00000616315 SPRR2DP22532 72 aa0.53□□□□□ -2.32
NEAT1-205ENST00000616315 FAT1Q14517 4588 aa0.52□□□□□ -2.33
NEAT1-205ENST00000616315 HERC1Q15751 4861 aa0.51□□□□□ -2.33
NEAT1-205ENST00000616315 STARD9Q9P2P6 4700 aa0.5□□□□□ -2.33
NEAT1-205ENST00000616315 SPRR2BP35325 72 aa0.5□□□□□ -2.33
NEAT1-205ENST00000616315 LRP1BQ9NZR2 4599 aa0.49□□□□□ -2.33
NEAT1-205ENST00000616315 MUC17Q685J3 4493 aa0.49□□□□□ -2.33
NEAT1-205ENST00000616315 KRTAP19-5Q3LI72 72 aa0.49□□□□□ -2.33
NEAT1-205ENST00000616315 SMR3BP02814 79 aaPredicted RBP0.48□□□□□ -2.33
NEAT1-205ENST00000616315 SPRR2AP35326 72 aa0.47□□□□□ -2.33
NEAT1-205ENST00000616315 KRTAP6-2Q3LI66 62 aa0.47□□□□□ -2.33
NEAT1-205ENST00000616315 MT1AP04731 61 aa0.46□□□□□ -2.34
NEAT1-205ENST00000616315 PHGR1C9JFL3 82 aa0.45□□□□□ -2.34
NEAT1-205ENST00000616315 LRP2P98164 4655 aa0.44□□□□□ -2.34
NEAT1-205ENST00000616315 SPRR2FQ96RM1 72 aa0.44□□□□□ -2.34
NEAT1-205ENST00000616315 SPRR2GQ9BYE4 73 aa0.44□□□□□ -2.34
NEAT1-205ENST00000616315 SYNE1Q8NF91 8797 aaKnown RBP0.44□□□□□ -2.34
NEAT1-205ENST00000616315 SPRR2EP22531 72 aa0.42□□□□□ -2.34
NEAT1-205ENST00000616315 DNHD1Q96M86 4753 aa0.41□□□□□ -2.34
NEAT1-205ENST00000616315 MT1HL1P0DM35 61 aa0.4□□□□□ -2.35
NEAT1-205ENST00000616315 MT1XP80297 61 aa0.4□□□□□ -2.35
NEAT1-205ENST00000616315 KRTAP19-8Q3LI54 63 aa0.4□□□□□ -2.35
NEAT1-205ENST00000616315 KRTAP19-2Q3LHN2 52 aa0.39□□□□□ -2.35
NEAT1-205ENST00000616315 MDN1Q9NU22 5596 aa0.39□□□□□ -2.35
NEAT1-205ENST00000616315 HMCN2Q8NDA2 5059 aa0.39□□□□□ -2.35
NEAT1-205ENST00000616315 FAT4Q6V0I7 4981 aa0.38□□□□□ -2.35
NEAT1-205ENST00000616315 MT1EP04732 61 aa0.38□□□□□ -2.35
NEAT1-205ENST00000616315 MT1LQ93083 61 aa0.37□□□□□ -2.35
NEAT1-205ENST00000616315 MT1BP07438 61 aa0.36□□□□□ -2.35
NEAT1-205ENST00000616315 MT2AP02795 61 aa0.35□□□□□ -2.35
NEAT1-205ENST00000616315 MT1FP04733 61 aa0.35□□□□□ -2.35
NEAT1-205ENST00000616315 MUC5ACP98088 5654 aa0.35□□□□□ -2.35
NEAT1-205ENST00000616315 KRTAP19-7Q3SYF9 63 aa0.34□□□□□ -2.36
NEAT1-205ENST00000616315 KMT2CQ8NEZ4 4911 aaKnown RBP0.33□□□□□ -2.36
NEAT1-205ENST00000616315 MT1GP13640 62 aa0.33□□□□□ -2.36
NEAT1-205ENST00000616315 MT1HP80294 61 aa0.33□□□□□ -2.36
NEAT1-205ENST00000616315 HERC2O95714 4834 aa0.33□□□□□ -2.36
NEAT1-205ENST00000616315 KMT2DO14686 5537 aa0.32□□□□□ -2.36
NEAT1-205ENST00000616315 MT1MQ8N339 61 aa0.31□□□□□ -2.36
NEAT1-205ENST00000616315 RYR1P21817 5038 aa0.31□□□□□ -2.36
NEAT1-205ENST00000616315 BIRC6Q9NR09 4857 aa0.3□□□□□ -2.36
NEAT1-205ENST00000616315 SSPOA2VEC9 5147 aa0.3□□□□□ -2.36
NEAT1-205ENST00000616315 RYR3Q15413 4870 aa0.3□□□□□ -2.36
NEAT1-205ENST00000616315 PCLOQ9Y6V0 5065 aa0.3□□□□□ -2.36
NEAT1-205ENST00000616315 KRTAP6-1Q3LI64 71 aa0.29□□□□□ -2.36
NEAT1-205ENST00000616315 RYR2Q92736 4967 aa0.29□□□□□ -2.36
NEAT1-205ENST00000616315 HYDINQ4G0P3 5121 aa0.29□□□□□ -2.36
NEAT1-205ENST00000616315 MUC2Q02817 5179 aa0.29□□□□□ -2.36
NEAT1-205ENST00000616315 MUC5BQ9HC84 5762 aaPredicted RBP0.28□□□□□ -2.36
NEAT1-205ENST00000616315 UBR4Q5T4S7 5183 aa0.28□□□□□ -2.37
NEAT1-205ENST00000616315 USH2AO75445 5202 aa0.27□□□□□ -2.37
NEAT1-205ENST00000616315 AHNAKQ09666 5890 aaKnown RBP0.25□□□□□ -2.37
NEAT1-205ENST00000616315 KIAA1109Q2LD37 5005 aa0.25□□□□□ -2.37
NEAT1-205ENST00000616315 ABCA13Q86UQ4 5058 aa0.24□□□□□ -2.37
NEAT1-205ENST00000616315 EPPK1P58107 5090 aaKnown RBP0.23□□□□□ -2.37
NEAT1-205ENST00000616315 KRTAP19-6Q3LI70 58 aa0.23□□□□□ -2.37
NEAT1-205ENST00000616315 GPR98Q8WXG9 6306 aa0.22□□□□□ -2.37
NEAT1-205ENST00000616315 MACF1Q9UPN3 7388 aaKnown RBP0.21□□□□□ -2.38
NEAT1-205ENST00000616315 RNF213Q63HN8 5207 aa0.21□□□□□ -2.38
NEAT1-205ENST00000616315 FSIP2Q5CZC0 6907 aa0.2□□□□□ -2.38
NEAT1-205ENST00000616315 SYNE2Q8WXH0 6885 aaKnown RBP0.19□□□□□ -2.38
NEAT1-205ENST00000616315 MUC12Q9UKN1 5478 aa0.18□□□□□ -2.38
NEAT1-205ENST00000616315 DSTQ03001 7570 aaKnown RBP0.18□□□□□ -2.38
NEAT1-205ENST00000616315 NEBP20929 6669 aa0.16□□□□□ -2.38
NEAT1-205ENST00000616315 KRTAP20-2Q3LI61 65 aa0.16□□□□□ -2.38
NEAT1-205ENST00000616315 MT4P47944 62 aa0.14□□□□□ -2.39
NEAT1-205ENST00000616315 KRTAP20-1Q3LI63 56 aa0.13□□□□□ -2.39
Retrieved 77 of 20,778 RNA–protein pairs in 137.4 ms